Protein ID | Ophio5|6698 |
Gene name | |
Location | scaffold_6:81335..81875 |
Strand | + |
Gene length (bp) | 540 |
Transcript length (bp) | 540 |
Coding sequence length (bp) | 537 |
Protein length (aa) | 179 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 19 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 2.34 | 0.0 | 4.92 |
CcL | In ants, during behavior modification | 0.00 | 0.0 | 0.00 |
CcD | In ants, recently dead | 0.11 | 0.0 | 0.68 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.000286 | yes |
SC16a | CcD | 0.236303 | no |
CcL | CcD | 1.000000 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6698 MRYDAIALVLALASFALAIPTELSDQGQSITSETHLFRRAAACSICCLKRKLCIKAKLCGCADEPAPAPAPVEDG GRRIIVVNGGNGGNGGGGGAGFGEGSGFGGGFGNGGGFGNGGGFGNGGGGGFGNGGGGGFGNGGGGGFGNGGGFG GGSGGGGGGGFGGGGGNGGGSFHTFSFRT |
Coding | >Ophio5|6698 ATGAGGTACGACGCCATTGCCCTCGTGCTCGCACTAGCCAGCTTCGCGCTCGCCATCCCGACCGAGTTGTCAGAT CAGGGTCAATCCATCACTTCGGAGACTCACCTCTTCCGACGAGCGGCCGCCTGCTCCATCTGCTGCCTCAAGAGA AAGCTCTGCATCAAGGCTAAGCTCTGCGGCTGTGCTGACGAGCCCGCTCCCGCGCCCGCGCCCGTGGAGGATGGA GGCCGCCGCATCATCGTCGTCAATGGAGGCAACGGAGGTAATGGAGGTGGTGGTGGCGCTGGCTTCGGTGAGGGT AGTGGTTTCGGTGGCGGCTTCGGCAACGGTGGTGGGTTCGGTAACGGTGGTGGATTCGGCAACGGCGGCGGCGGT GGATTCGGCAACGGTGGCGGCGGAGGATTCGGCAACGGTGGCGGCGGAGGATTCGGTAACGGTGGTGGTTTCGGA GGCGGATCCGGCGGTGGCGGTGGTGGTGGCTTCGGCGGCGGCGGCGGAAACGGTGGTGGCAGCTTCCACACCTTT AGCTTCCGTACC |
Transcript | >Ophio5|6698 ATGAGGTACGACGCCATTGCCCTCGTGCTCGCACTAGCCAGCTTCGCGCTCGCCATCCCGACCGAGTTGTCAGAT CAGGGTCAATCCATCACTTCGGAGACTCACCTCTTCCGACGAGCGGCCGCCTGCTCCATCTGCTGCCTCAAGAGA AAGCTCTGCATCAAGGCTAAGCTCTGCGGCTGTGCTGACGAGCCCGCTCCCGCGCCCGCGCCCGTGGAGGATGGA GGCCGCCGCATCATCGTCGTCAATGGAGGCAACGGAGGTAATGGAGGTGGTGGTGGCGCTGGCTTCGGTGAGGGT AGTGGTTTCGGTGGCGGCTTCGGCAACGGTGGTGGGTTCGGTAACGGTGGTGGATTCGGCAACGGCGGCGGCGGT GGATTCGGCAACGGTGGCGGCGGAGGATTCGGCAACGGTGGCGGCGGAGGATTCGGTAACGGTGGTGGTTTCGGA GGCGGATCCGGCGGTGGCGGTGGTGGTGGCTTCGGCGGCGGCGGCGGAAACGGTGGTGGCAGCTTCCACACCTTT AGCTTCCGTACCTAA |
Gene | >Ophio5|6698 ATGAGGTACGACGCCATTGCCCTCGTGCTCGCACTAGCCAGCTTCGCGCTCGCCATCCCGACCGAGTTGTCAGAT CAGGGTCAATCCATCACTTCGGAGACTCACCTCTTCCGACGAGCGGCCGCCTGCTCCATCTGCTGCCTCAAGAGA AAGCTCTGCATCAAGGCTAAGCTCTGCGGCTGTGCTGACGAGCCCGCTCCCGCGCCCGCGCCCGTGGAGGATGGA GGCCGCCGCATCATCGTCGTCAATGGAGGCAACGGAGGTAATGGAGGTGGTGGTGGCGCTGGCTTCGGTGAGGGT AGTGGTTTCGGTGGCGGCTTCGGCAACGGTGGTGGGTTCGGTAACGGTGGTGGATTCGGCAACGGCGGCGGCGGT GGATTCGGCAACGGTGGCGGCGGAGGATTCGGCAACGGTGGCGGCGGAGGATTCGGTAACGGTGGTGGTTTCGGA GGCGGATCCGGCGGTGGCGGTGGTGGTGGCTTCGGCGGCGGCGGCGGAAACGGTGGTGGCAGCTTCCACACCTTT AGCTTCCGTACCTAA |