Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6695
Gene name
Locationscaffold_6:74735..75661
Strand-
Gene length (bp)926
Transcript length (bp)873
Coding sequence length (bp)870
Protein length (aa) 290

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 96 118 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6695
MATPVLPRLSSPASRDEGRVAPLAKQTTSSAFTMNSQGSLEPFPTSSPVSNVYSSSESTSSVCSSPQRQPPAYGD
EPANYGEELLSQIKARERKTIFIRLLSSIFITVLVSLIVAAVVERIHDNRGDVHHEVPTRSVEKITVSSTQASSA
EAASATPESAAVVTDTAVTSSSPSVTTHPTASRTGFESAASTQAVTTIDCASMSLLSGASLVTSFRQQPSKRNAP
PVPTPTAGDPRLQELAVYSFRGCLWAQSFHRAGDRRRDGMNRLCTVTCPADKADALSARGTMPDD
Coding >Ophio5|6695
ATGGCCACGCCAGTTCTCCCCCGTCTCTCTTCTCCAGCATCGCGAGACGAAGGAAGGGTGGCGCCCCTCGCTAAG
CAGACAACCTCGTCTGCGTTCACGATGAATAGCCAAGGCTCACTGGAGCCGTTCCCGACATCGTCGCCCGTGAGC
AACGTCTATTCCAGCAGCGAGTCGACGTCGTCGGTGTGCTCGTCCCCACAACGCCAGCCGCCGGCTTACGGCGAC
GAGCCGGCCAACTATGGGGAGGAGCTCCTCAGCCAGATCAAAGCGCGGGAGCGAAAGACGATATTCATCCGACTG
CTGTCGTCGATATTCATCACCGTCCTCGTGTCGCTGATTGTGGCCGCCGTCGTGGAGCGCATTCACGACAATCGC
GGTGACGTACACCACGAGGTCCCCACGCGGAGCGTGGAGAAGATTACCGTAAGTTCGACACAGGCATCATCAGCC
GAAGCGGCGTCAGCGACACCTGAATCTGCGGCAGTGGTGACGGACACTGCTGTAACATCCAGCTCTCCTTCAGTA
ACAACGCACCCTACTGCCTCTAGGACTGGGTTCGAAAGCGCCGCTTCGACACAGGCCGTCACCACCATCGACTGC
GCCTCCATGAGTCTCCTCAGCGGCGCGTCTTTGGTGACGAGCTTCCGGCAGCAGCCTTCGAAACGAAATGCGCCT
CCTGTTCCGACGCCCACGGCGGGCGATCCGCGCTTGCAGGAGTTGGCCGTGTATTCCTTTCGAGGCTGCCTGTGG
GCGCAAAGTTTCCACCGGGCCGGCGACCGGCGGCGCGATGGCATGAACCGGCTGTGCACCGTCACCTGTCCGGCG
GACAAGGCTGATGCTCTCTCGGCACGCGGAACGATGCCGGATGAC
Transcript >Ophio5|6695
ATGGCCACGCCAGTTCTCCCCCGTCTCTCTTCTCCAGCATCGCGAGACGAAGGAAGGGTGGCGCCCCTCGCTAAG
CAGACAACCTCGTCTGCGTTCACGATGAATAGCCAAGGCTCACTGGAGCCGTTCCCGACATCGTCGCCCGTGAGC
AACGTCTATTCCAGCAGCGAGTCGACGTCGTCGGTGTGCTCGTCCCCACAACGCCAGCCGCCGGCTTACGGCGAC
GAGCCGGCCAACTATGGGGAGGAGCTCCTCAGCCAGATCAAAGCGCGGGAGCGAAAGACGATATTCATCCGACTG
CTGTCGTCGATATTCATCACCGTCCTCGTGTCGCTGATTGTGGCCGCCGTCGTGGAGCGCATTCACGACAATCGC
GGTGACGTACACCACGAGGTCCCCACGCGGAGCGTGGAGAAGATTACCGTAAGTTCGACACAGGCATCATCAGCC
GAAGCGGCGTCAGCGACACCTGAATCTGCGGCAGTGGTGACGGACACTGCTGTAACATCCAGCTCTCCTTCAGTA
ACAACGCACCCTACTGCCTCTAGGACTGGGTTCGAAAGCGCCGCTTCGACACAGGCCGTCACCACCATCGACTGC
GCCTCCATGAGTCTCCTCAGCGGCGCGTCTTTGGTGACGAGCTTCCGGCAGCAGCCTTCGAAACGAAATGCGCCT
CCTGTTCCGACGCCCACGGCGGGCGATCCGCGCTTGCAGGAGTTGGCCGTGTATTCCTTTCGAGGCTGCCTGTGG
GCGCAAAGTTTCCACCGGGCCGGCGACCGGCGGCGCGATGGCATGAACCGGCTGTGCACCGTCACCTGTCCGGCG
GACAAGGCTGATGCTCTCTCGGCACGCGGAACGATGCCGGATGACTGA
Gene >Ophio5|6695
ATGGCCACGCCAGTTCTCCCCCGTCTCTCTTCTCCAGCATCGCGAGACGAAGGAAGGGTGGCGCCCCTCGCTAAG
CAGACAACCTCGTCTGCGTTCACGATGAATAGCCAAGGCTCACTGGAGCCGTTCCCGACATCGTCGCCCGTGAGC
AACGTCTATTCCAGCAGCGAGTCGACGTCGTCGGTGTGCTCGTCCCCACAACGCCAGCCGCCGGCTTACGGCGAC
GAGCCGGCCAACTATGGGGAGGAGCTCCTCAGCCAGATCAAAGCGCGGGAGCGAAAGACGATATTCATCCGACTG
CTGTCGTCGATATTCATCACCGTCCTCGTGTCGCTGATTGTGGCCGCCGTCGTGGAGCGCATTCACGACAATCGC
GGTGACGTACACCACGAGGTCCCCACGTCGGTTTTGACTGTCGGTCGCTCTGGATAGAAGGAGGCTAACGCGATA
GCAGGCGGAGCGTGGAGAAGATTACCGTAAGTTCGACACAGGCATCATCAGCCGAAGCGGCGTCAGCGACACCTG
AATCTGCGGCAGTGGTGACGGACACTGCTGTAACATCCAGCTCTCCTTCAGTAACAACGCACCCTACTGCCTCTA
GGACTGGGTTCGAAAGCGCCGCTTCGACACAGGCCGTCACCACCATCGACTGCGCCTCCATGAGTCTCCTCAGCG
GCGCGTCTTTGGTGACGAGCTTCCGGCAGCAGCCTTCGAAACGAAATGCGCCTCCTGTTCCGACGCCCACGGCGG
GCGATCCGCGCTTGCAGGAGTTGGCCGTGTATTCCTTTCGAGGCTGCCTGTGGGCGCAAAGTTTCCACCGGGCCG
GCGACCGGCGGCGCGATGGCATGAACCGGCTGTGCACCGTCACCTGTCCGGCGGACAAGGCTGATGCTCTCTCGG
CACGCGGAACGATGCCGGATGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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