Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|6663
Gene name
Location	scaffold_6:897..2688
Strand	+
Gene length (bp)	1791
Transcript length (bp)	1737
Coding sequence length (bp)	1734
Protein length (aa)	578

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05502	Dynactin_p62	Dynactin p62 family	2.2E-189	54	515

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9QUR2\|DCTN4_RAT	Dynactin subunit 4 OS=Rattus norvegicus GN=Dctn4 PE=1 SV=1	54	443	7.0E-24
sp\|Q8CBY8\|DCTN4_MOUSE	Dynactin subunit 4 OS=Mus musculus GN=Dctn4 PE=1 SV=1	54	443	8.0E-24
sp\|Q9UJW0\|DCTN4_HUMAN	Dynactin subunit 4 OS=Homo sapiens GN=DCTN4 PE=1 SV=1	54	443	1.0E-23
sp\|Q5R7U7\|DCTN4_PONAB	Dynactin subunit 4 OS=Pongo abelii GN=DCTN4 PE=2 SV=1	54	443	1.0E-22

GO

GO Term	Description	Terminal node
GO:0005869	dynactin complex	Yes
GO:0005575	cellular_component	No
GO:0032991	protein-containing complex	No
GO:0005875	microtubule associated complex	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 21	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|6663 MARPVPYTYIQCPCSDPSSAASPDEASSPLSASSADSERTFNPRAPRSSFSLYPLEYLLYCEDCQQIRCPRCVTE ETVTYYCPNCLFEVPSSNLRSEGNRCTRSCYQCPVCVAPLQVSSIRPTPPQPDGDGHSSGGPFALFCQYCSWSSR ETGIEFERASGIHSQLAKMENGGAPRLTFREMRERRKDRPEDPPLPDALLNRHLQFASLKAFYHEQLADARAAVA GGLPMRDGLALASSPASLTRIMSLYTGRAAHHHHHHHHGQNGRPADVVREALTTDEGLRLAQLDESSSVDKLALG GWHSTASHQQRLLQPDAVADVRFTDHLCPVPCLLRTKRSKRCPVCRHIISKPEAKVTSTRFKIRLVAKSYMPSIA IRPLSPAAGPIPVGSRPAPAAGPPLAPLRPHQFVLTFRNPLFDAISVTLAIPSLTPGRVASTVTVLCPQFDVGAN TDMWDDALRDDATASRDLVTTATTAARRGPADDGPGQAEAGKVWDRGRNWVSIVLEVIPASLRAAVAKGGPLRPD DDVLEIPMFVRVEWEADAQHDMGGPPADRDKDSREKRELAYWCVLGVGRIADD
Coding	>Ophio5\|6663 ATGGCCCGCCCCGTGCCGTACACCTACATTCAGTGTCCCTGCTCCGATCCGTCGTCCGCCGCCTCCCCCGATGAG GCTTCCAGTCCGCTGAGCGCCTCGTCAGCCGACAGCGAGCGAACTTTCAATCCGCGCGCGCCTCGCTCAAGCTTC AGCCTCTATCCGCTGGAATATCTCCTCTACTGCGAGGACTGTCAGCAAATTCGCTGCCCGCGATGCGTCACCGAG GAGACCGTCACCTACTACTGCCCAAACTGTTTGTTCGAGGTGCCTAGTAGCAACCTCCGCAGCGAGGGCAACAGA TGCACTCGGAGCTGTTATCAGTGTCCCGTCTGTGTCGCCCCTCTTCAGGTCAGCTCCATCCGTCCGACGCCGCCT CAGCCAGATGGCGACGGCCACAGCAGCGGAGGACCTTTTGCCCTCTTCTGCCAGTACTGCAGTTGGTCGTCGCGC GAGACGGGCATCGAATTCGAACGAGCCAGCGGCATTCACTCTCAACTCGCCAAGATGGAAAACGGTGGCGCGCCC CGTCTGACGTTCAGAGAAATGCGCGAGCGACGCAAAGACAGACCCGAAGATCCGCCCCTACCAGATGCGCTCCTG AATCGCCATCTACAATTCGCCAGCCTCAAGGCTTTTTATCATGAGCAACTGGCCGATGCCCGCGCCGCCGTCGCC GGAGGTCTTCCGATGCGCGATGGCCTCGCCCTGGCTTCCTCCCCCGCTTCTCTGACGCGCATCATGTCGCTCTAC ACCGGCCGCGCAGCCCATCATCATCATCATCATCATCATGGACAGAATGGTCGACCAGCCGACGTCGTTCGCGAG GCCCTCACCACAGACGAAGGCCTTCGCCTCGCTCAGCTCGATGAATCGTCCTCGGTCGACAAGCTCGCCCTCGGC GGCTGGCACTCCACCGCCTCGCACCAACAGCGTCTCCTACAGCCCGACGCCGTCGCCGACGTGCGCTTCACGGAC CATCTTTGTCCTGTCCCTTGCCTGCTGCGCACTAAGCGTTCCAAGCGCTGTCCCGTCTGCCGCCACATCATCTCC AAGCCCGAGGCAAAAGTGACGTCGACGCGGTTCAAGATCCGCCTCGTGGCAAAGTCGTACATGCCCTCCATCGCC ATACGGCCTCTGAGTCCAGCCGCCGGTCCCATCCCCGTCGGTTCGCGTCCGGCTCCGGCCGCCGGGCCACCGCTC GCGCCCTTGAGACCGCATCAGTTCGTCCTGACGTTTCGCAACCCGCTTTTCGACGCCATCAGCGTCACTCTCGCT ATCCCGAGCCTCACGCCCGGCCGTGTCGCCAGTACGGTCACCGTCTTGTGTCCGCAGTTCGACGTCGGCGCCAAT ACCGACATGTGGGATGACGCCCTACGCGACGACGCTACCGCCTCCAGGGACCTCGTCACTACTGCTACCACGGCC GCTCGCCGAGGGCCCGCTGACGATGGCCCCGGTCAGGCCGAGGCCGGCAAGGTCTGGGATCGGGGCCGCAACTGG GTCAGCATCGTCCTCGAGGTCATTCCGGCCTCCCTGCGCGCCGCAGTAGCCAAAGGTGGCCCGCTGCGGCCCGAC GACGACGTCCTCGAGATTCCCATGTTCGTCCGCGTCGAGTGGGAAGCCGATGCGCAGCACGACATGGGTGGCCCC CCCGCCGACAGGGACAAGGATTCGAGGGAGAAGCGGGAGCTGGCTTACTGGTGCGTCCTCGGCGTTGGCCGAATC GCCGACGAT
Transcript	>Ophio5\|6663 ATGGCCCGCCCCGTGCCGTACACCTACATTCAGTGTCCCTGCTCCGATCCGTCGTCCGCCGCCTCCCCCGATGAG GCTTCCAGTCCGCTGAGCGCCTCGTCAGCCGACAGCGAGCGAACTTTCAATCCGCGCGCGCCTCGCTCAAGCTTC AGCCTCTATCCGCTGGAATATCTCCTCTACTGCGAGGACTGTCAGCAAATTCGCTGCCCGCGATGCGTCACCGAG GAGACCGTCACCTACTACTGCCCAAACTGTTTGTTCGAGGTGCCTAGTAGCAACCTCCGCAGCGAGGGCAACAGA TGCACTCGGAGCTGTTATCAGTGTCCCGTCTGTGTCGCCCCTCTTCAGGTCAGCTCCATCCGTCCGACGCCGCCT CAGCCAGATGGCGACGGCCACAGCAGCGGAGGACCTTTTGCCCTCTTCTGCCAGTACTGCAGTTGGTCGTCGCGC GAGACGGGCATCGAATTCGAACGAGCCAGCGGCATTCACTCTCAACTCGCCAAGATGGAAAACGGTGGCGCGCCC CGTCTGACGTTCAGAGAAATGCGCGAGCGACGCAAAGACAGACCCGAAGATCCGCCCCTACCAGATGCGCTCCTG AATCGCCATCTACAATTCGCCAGCCTCAAGGCTTTTTATCATGAGCAACTGGCCGATGCCCGCGCCGCCGTCGCC GGAGGTCTTCCGATGCGCGATGGCCTCGCCCTGGCTTCCTCCCCCGCTTCTCTGACGCGCATCATGTCGCTCTAC ACCGGCCGCGCAGCCCATCATCATCATCATCATCATCATGGACAGAATGGTCGACCAGCCGACGTCGTTCGCGAG GCCCTCACCACAGACGAAGGCCTTCGCCTCGCTCAGCTCGATGAATCGTCCTCGGTCGACAAGCTCGCCCTCGGC GGCTGGCACTCCACCGCCTCGCACCAACAGCGTCTCCTACAGCCCGACGCCGTCGCCGACGTGCGCTTCACGGAC CATCTTTGTCCTGTCCCTTGCCTGCTGCGCACTAAGCGTTCCAAGCGCTGTCCCGTCTGCCGCCACATCATCTCC AAGCCCGAGGCAAAAGTGACGTCGACGCGGTTCAAGATCCGCCTCGTGGCAAAGTCGTACATGCCCTCCATCGCC ATACGGCCTCTGAGTCCAGCCGCCGGTCCCATCCCCGTCGGTTCGCGTCCGGCTCCGGCCGCCGGGCCACCGCTC GCGCCCTTGAGACCGCATCAGTTCGTCCTGACGTTTCGCAACCCGCTTTTCGACGCCATCAGCGTCACTCTCGCT ATCCCGAGCCTCACGCCCGGCCGTGTCGCCAGTACGGTCACCGTCTTGTGTCCGCAGTTCGACGTCGGCGCCAAT ACCGACATGTGGGATGACGCCCTACGCGACGACGCTACCGCCTCCAGGGACCTCGTCACTACTGCTACCACGGCC GCTCGCCGAGGGCCCGCTGACGATGGCCCCGGTCAGGCCGAGGCCGGCAAGGTCTGGGATCGGGGCCGCAACTGG GTCAGCATCGTCCTCGAGGTCATTCCGGCCTCCCTGCGCGCCGCAGTAGCCAAAGGTGGCCCGCTGCGGCCCGAC GACGACGTCCTCGAGATTCCCATGTTCGTCCGCGTCGAGTGGGAAGCCGATGCGCAGCACGACATGGGTGGCCCC CCCGCCGACAGGGACAAGGATTCGAGGGAGAAGCGGGAGCTGGCTTACTGGTGCGTCCTCGGCGTTGGCCGAATC GCCGACGATTGA
Gene	>Ophio5\|6663 ATGGCCCGCCCCGTGCCGTACACCTACATTCAGTGTCCCTGCTCCGATCCGTCGTCCGCCGCCTCCCCCGATGAG GCTTCCAGTCCGCTGAGCGCCTCGTCAGCCGACAGCGAGCGAACTTTCAATCCGCGCGCGCCTCGCTCAAGCTTC AGCCTCTATCCGCTGGAATATCTCCTCTACTGCGAGGACTGTCAGCAAATTCGCTGCCCGCGATGCGTCACCGAG GAGACCGTCACCTACTACTGCCCAAACTGTTTGTTCGAGGTGCCTAGTAGCAACCTCCGCAGCGAGGGCAACAGG TGAGCCTTGTCTGTTTTTTCTGCCCGCTCGCCAAAACTCAACTCGGCGATAAGATGCACTCGGAGCTGTTATCAG TGTCCCGTCTGTGTCGCCCCTCTTCAGGTCAGCTCCATCCGTCCGACGCCGCCTCAGCCAGATGGCGACGGCCAC AGCAGCGGAGGACCTTTTGCCCTCTTCTGCCAGTACTGCAGTTGGTCGTCGCGCGAGACGGGCATCGAATTCGAA CGAGCCAGCGGCATTCACTCTCAACTCGCCAAGATGGAAAACGGTGGCGCGCCCCGTCTGACGTTCAGAGAAATG CGCGAGCGACGCAAAGACAGACCCGAAGATCCGCCCCTACCAGATGCGCTCCTGAATCGCCATCTACAATTCGCC AGCCTCAAGGCTTTTTATCATGAGCAACTGGCCGATGCCCGCGCCGCCGTCGCCGGAGGTCTTCCGATGCGCGAT GGCCTCGCCCTGGCTTCCTCCCCCGCTTCTCTGACGCGCATCATGTCGCTCTACACCGGCCGCGCAGCCCATCAT CATCATCATCATCATCATGGACAGAATGGTCGACCAGCCGACGTCGTTCGCGAGGCCCTCACCACAGACGAAGGC CTTCGCCTCGCTCAGCTCGATGAATCGTCCTCGGTCGACAAGCTCGCCCTCGGCGGCTGGCACTCCACCGCCTCG CACCAACAGCGTCTCCTACAGCCCGACGCCGTCGCCGACGTGCGCTTCACGGACCATCTTTGTCCTGTCCCTTGC CTGCTGCGCACTAAGCGTTCCAAGCGCTGTCCCGTCTGCCGCCACATCATCTCCAAGCCCGAGGCAAAAGTGACG TCGACGCGGTTCAAGATCCGCCTCGTGGCAAAGTCGTACATGCCCTCCATCGCCATACGGCCTCTGAGTCCAGCC GCCGGTCCCATCCCCGTCGGTTCGCGTCCGGCTCCGGCCGCCGGGCCACCGCTCGCGCCCTTGAGACCGCATCAG TTCGTCCTGACGTTTCGCAACCCGCTTTTCGACGCCATCAGCGTCACTCTCGCTATCCCGAGCCTCACGCCCGGC CGTGTCGCCAGTACGGTCACCGTCTTGTGTCCGCAGTTCGACGTCGGCGCCAATACCGACATGTGGGATGACGCC CTACGCGACGACGCTACCGCCTCCAGGGACCTCGTCACTACTGCTACCACGGCCGCTCGCCGAGGGCCCGCTGAC GATGGCCCCGGTCAGGCCGAGGCCGGCAAGGTCTGGGATCGGGGCCGCAACTGGGTCAGCATCGTCCTCGAGGTC ATTCCGGCCTCCCTGCGCGCCGCAGTAGCCAAAGGTGGCCCGCTGCGGCCCGACGACGACGTCCTCGAGATTCCC ATGTTCGTCCGCGTCGAGTGGGAAGCCGATGCGCAGCACGACATGGGTGGCCCCCCCGCCGACAGGGACAAGGAT TCGAGGGAGAAGCGGGAGCTGGCTTACTGGTGCGTCCTCGGCGTTGGCCGAATCGCCGACGATTGA

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