Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|6661
Gene name
Location	scaffold_599:4168..5387
Strand	+
Gene length (bp)	1219
Transcript length (bp)	1098
Coding sequence length (bp)	1095
Protein length (aa)	365

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12146	Hydrolase_4	Serine aminopeptidase, S33	1.6E-15	81	239
PF00561	Abhydrolase_1	alpha/beta hydrolase fold	6.1E-10	82	195
PF12697	Abhydrolase_6	Alpha/beta hydrolase family	9.2E-10	82	341

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|L0TC47\|LIPV_MYCTU	Lipase LipV OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=lipV PE=1 SV=2	69	216	1.0E-06
sp\|B1ZB18\|RUTD_METPB	Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1	75	248	8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 26	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	4	26	22
2	156	173	17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|6661 MNKFPLLFAVALMVAAASLLLVASAARRRNQRVLRAPSRLMSSDDKQQLVYQPDSLPGARDVETPYGTVRVYEFG PKDGDKVLLVHGITTPCVPLAPLAHALVERGCRVMLFDLFGRGYSDGVGDLPHDARLYVSQMLCVLASSPLPWTG RAAIRLIGYSMGGAIAIHFAIAFPDLVDSLVLLAPAGLIRFDTRTAAIRRVVSAGALPEFLLAAYAAVRLRSPLT STAVSRSAVAVAAAQAEVSSPGSAHAPLEDRVSEYVRWMVGHHPGFVPAFLSCMRAAPLTDQHESWGRLARRPPG STAVLLAEDDELISPSIYAREGLPLAGGPERVVWKVLPGTHDFIMTHVDSILSELDQLWHMKKSA
Coding	>Ophio5\|6661 ATGAACAAGTTTCCTTTATTGTTCGCTGTTGCGCTCATGGTCGCCGCGGCGTCGCTGCTTCTCGTGGCTTCTGCC GCCCGTCGACGGAACCAGCGGGTGCTTCGCGCGCCGTCACGATTGATGAGCAGCGACGACAAGCAACAGCTGGTC TATCAGCCGGATTCGCTGCCCGGGGCGAGAGACGTCGAGACGCCGTATGGCACGGTCCGCGTCTACGAGTTCGGC CCCAAGGACGGCGACAAGGTGCTGCTCGTGCACGGCATCACCACACCGTGTGTGCCGCTGGCACCGCTGGCTCAC GCCCTGGTTGAGCGCGGCTGTCGCGTCATGCTCTTTGACCTCTTCGGCCGCGGTTATTCAGACGGCGTCGGCGAT CTTCCTCACGATGCCCGCCTCTATGTATCGCAGATGCTCTGCGTCCTCGCCTCCAGTCCGCTGCCATGGACAGGC CGCGCCGCCATACGCCTCATCGGCTACTCAATGGGCGGCGCAATTGCCATTCACTTTGCCATCGCCTTTCCCGAT CTTGTCGACTCTCTAGTTCTGCTCGCCCCTGCCGGACTCATTCGGTTCGATACTCGCACTGCCGCCATTCGTCGT GTCGTCTCTGCCGGTGCGCTTCCCGAGTTCCTTCTCGCCGCCTACGCCGCCGTCCGCCTGCGTTCCCCTTTGACC TCAACTGCCGTTTCGAGGTCAGCCGTTGCAGTGGCCGCCGCCCAAGCTGAGGTCAGCTCTCCCGGCTCCGCCCAC GCGCCTCTCGAGGATCGCGTCTCCGAGTACGTCCGCTGGATGGTTGGACATCACCCCGGCTTCGTCCCAGCCTTC CTGTCCTGTATGCGCGCTGCGCCCCTTACCGACCAGCACGAAAGCTGGGGCCGCCTCGCCCGAAGGCCTCCCGGG TCCACTGCCGTCTTACTTGCCGAGGATGACGAGCTCATCAGCCCCTCCATCTACGCTCGTGAAGGCCTGCCTCTG GCGGGTGGACCCGAACGCGTCGTCTGGAAGGTCCTGCCGGGCACCCACGATTTCATCATGACCCATGTCGACTCC ATCCTCAGCGAGCTGGACCAGTTGTGGCACATGAAGAAGTCGGCG
Transcript	>Ophio5\|6661 ATGAACAAGTTTCCTTTATTGTTCGCTGTTGCGCTCATGGTCGCCGCGGCGTCGCTGCTTCTCGTGGCTTCTGCC GCCCGTCGACGGAACCAGCGGGTGCTTCGCGCGCCGTCACGATTGATGAGCAGCGACGACAAGCAACAGCTGGTC TATCAGCCGGATTCGCTGCCCGGGGCGAGAGACGTCGAGACGCCGTATGGCACGGTCCGCGTCTACGAGTTCGGC CCCAAGGACGGCGACAAGGTGCTGCTCGTGCACGGCATCACCACACCGTGTGTGCCGCTGGCACCGCTGGCTCAC GCCCTGGTTGAGCGCGGCTGTCGCGTCATGCTCTTTGACCTCTTCGGCCGCGGTTATTCAGACGGCGTCGGCGAT CTTCCTCACGATGCCCGCCTCTATGTATCGCAGATGCTCTGCGTCCTCGCCTCCAGTCCGCTGCCATGGACAGGC CGCGCCGCCATACGCCTCATCGGCTACTCAATGGGCGGCGCAATTGCCATTCACTTTGCCATCGCCTTTCCCGAT CTTGTCGACTCTCTAGTTCTGCTCGCCCCTGCCGGACTCATTCGGTTCGATACTCGCACTGCCGCCATTCGTCGT GTCGTCTCTGCCGGTGCGCTTCCCGAGTTCCTTCTCGCCGCCTACGCCGCCGTCCGCCTGCGTTCCCCTTTGACC TCAACTGCCGTTTCGAGGTCAGCCGTTGCAGTGGCCGCCGCCCAAGCTGAGGTCAGCTCTCCCGGCTCCGCCCAC GCGCCTCTCGAGGATCGCGTCTCCGAGTACGTCCGCTGGATGGTTGGACATCACCCCGGCTTCGTCCCAGCCTTC CTGTCCTGTATGCGCGCTGCGCCCCTTACCGACCAGCACGAAAGCTGGGGCCGCCTCGCCCGAAGGCCTCCCGGG TCCACTGCCGTCTTACTTGCCGAGGATGACGAGCTCATCAGCCCCTCCATCTACGCTCGTGAAGGCCTGCCTCTG GCGGGTGGACCCGAACGCGTCGTCTGGAAGGTCCTGCCGGGCACCCACGATTTCATCATGACCCATGTCGACTCC ATCCTCAGCGAGCTGGACCAGTTGTGGCACATGAAGAAGTCGGCGTGA
Gene	>Ophio5\|6661 ATGAACAAGTTTCCTTTATTGTTCGCTGTTGCGCTCATGGTCGCCGCGGCGTCGCTGCTTCTCGTGGCTTCTGCC GCCCGTCGACGGAACCAGCGGGTGCTTCGCGCGCCGTCACGATTGATGAGCAGCGACGACAAGCAACAGCTGGTC TATCAGCCGGATTCGCTGCCCGGGGCGAGAGACGTCGAGACGCCGGTAAGGATGCCATTTAGTGAGGAATCAAAA TCGAAAGCTGAAACTTTCCTTTTTATTAAAAATGGCAGTATGGCACGGTCCGCGTCTACGAGTTCGGCCCCAAGG ACGGCGACAAGGTGCTGCTCGTGCACGGCATCACCACACCGTGTGTGCCGCTGGCACCGCTGGCTCACGCCCTGG TTGAGCGCGGCTGTCGCGTCATGCTCTTTGTGAGCTTCTCGGCCCTTAAGTTTGCGTAGTTGTTGATGCTGACTT CTGCCAGGACCTCTTCGGCCGCGGTTATTCAGACGGCGTCGGCGATCTTCCTCACGATGCCCGCCTCTATGTATC GCAGATGCTCTGCGTCCTCGCCTCCAGTCCGCTGCCATGGACAGGCCGCGCCGCCATACGCCTCATCGGCTACTC AATGGGCGGCGCAATTGCCATTCACTTTGCCATCGCCTTTCCCGATCTTGTCGACTCTCTAGTTCTGCTCGCCCC TGCCGGACTCATTCGGTTCGATACTCGCACTGCCGCCATTCGTCGTGTCGTCTCTGCCGGTGCGCTTCCCGAGTT CCTTCTCGCCGCCTACGCCGCCGTCCGCCTGCGTTCCCCTTTGACCTCAACTGCCGTTTCGAGGTCAGCCGTTGC AGTGGCCGCCGCCCAAGCTGAGGTCAGCTCTCCCGGCTCCGCCCACGCGCCTCTCGAGGATCGCGTCTCCGAGTA CGTCCGCTGGATGGTTGGACATCACCCCGGCTTCGTCCCAGCCTTCCTGTCCTGTATGCGCGCTGCGCCCCTTAC CGACCAGCACGAAAGCTGGGGCCGCCTCGCCCGAAGGCCTCCCGGGTCCACTGCCGTCTTACTTGCCGAGGATGA CGAGCTCATCAGCCCCTCCATCTACGCTCGTGAAGGCCTGCCTCTGGCGGGTGGACCCGAACGCGTCGTCTGGAA GGTCCTGCCGGGCACCCACGATTTCATCATGACCCATGTCGACTCCATCCTCAGCGAGCTGGACCAGTTGTGGCA CATGAAGAAGTCGGCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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