Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|666
Gene name
Location	scaffold_118:21594..22878
Strand	+
Gene length (bp)	1284
Transcript length (bp)	1014
Coding sequence length (bp)	1011
Protein length (aa)	337

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00190	Cupin_1	Cupin	1.4E-15	26	144
PF00190	Cupin_1	Cupin	6.0E-22	192	300
PF07883	Cupin_2	Cupin domain	2.1E-09	40	99
PF07883	Cupin_2	Cupin domain	3.5E-12	220	291

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|D4AKL6\|OXDD_ARTBC	Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1	1	337	2.0E-137
sp\|D4B179\|OXDC_ARTBC	Oxalate decarboxylase ARB_02208 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02208 PE=1 SV=1	1	337	1.0E-128
sp\|O34767\|OXDD_BACSU	Oxalate decarboxylase OxdD OS=Bacillus subtilis (strain 168) GN=oxdD PE=1 SV=1	1	337	2.0E-100
sp\|O34714\|OXDC_BACSU	Oxalate decarboxylase OxdC OS=Bacillus subtilis (strain 168) GN=oxdC PE=1 SV=1	3	337	1.0E-90
sp\|D4AKL6\|OXDD_ARTBC	Probable oxalate decarboxylase ARB_04859 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04859 PE=1 SV=1	18	160	9.0E-11

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 22	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|666 MPNLKWSFSDSWTQLFEGGWGREQVVYDLPQSHDIAGAQEHLEKGAIQELHWHRLAEWGFVYKGRILVSVVDEQG NHQVQELNYGDVWYFPKGVAHTLQGLDDANEYLILLDGADVNKAGTIFHLDDWVAHTPKDILAKNFGVPESTFDK IPQKHPYILAGTVDQTNVTGAPVPMATGDSTYVYRTFQHAPEKIGGNGGEVHKIDSTNFPIAKTIAATHIRLKPG GLRELHWHPNAEEWIYFHQGTAKGTAFIGQSTARTYDFRAGDVAVFPDNAGHYIENTGKEDLIFFEFFKADRVVD ISLSQWLALTPHSIVSQVLKVPLEFVQELKKSKQVLV
Coding	>Ophio5\|666 ATGCCCAATCTGAAATGGAGTTTCTCTGACTCTTGGACTCAACTCTTCGAAGGTGGCTGGGGTAGAGAGCAGGTG GTTTACGATCTACCTCAGTCACACGACATTGCCGGCGCACAGGAGCATCTGGAGAAGGGCGCCATCCAAGAACTT CACTGGCATAGACTCGCCGAATGGGGCTTCGTATACAAGGGACGGATACTCGTCTCCGTCGTTGACGAGCAAGGC AATCATCAGGTCCAAGAGCTCAACTATGGCGACGTTTGGTATTTCCCAAAGGGCGTCGCGCATACTCTTCAAGGC CTGGACGACGCGAACGAATACCTGATCCTTCTTGACGGTGCTGATGTCAACAAGGCCGGAACAATTTTTCATCTG GACGACTGGGTCGCTCACACGCCCAAAGACATTCTGGCCAAAAACTTTGGTGTTCCCGAGTCGACATTTGACAAG ATACCGCAAAAGCATCCCTACATATTGGCCGGCACCGTAGACCAGACCAACGTGACTGGCGCCCCGGTGCCCATG GCAACCGGTGACAGCACCTACGTCTATCGAACCTTTCAACACGCTCCGGAAAAGATTGGCGGTAACGGGGGAGAA GTCCACAAGATTGACTCTACCAATTTCCCCATCGCAAAGACTATCGCCGCCACCCATATAAGACTCAAGCCTGGT GGTCTCCGTGAACTCCATTGGCACCCGAATGCCGAGGAGTGGATCTATTTTCACCAAGGAACTGCCAAAGGAACC GCCTTCATCGGACAGTCCACAGCTCGCACCTACGACTTTCGGGCCGGCGATGTTGCCGTCTTCCCAGACAATGCT GGGCATTACATCGAAAATACTGGGAAAGAGGATCTCATCTTCTTCGAGTTCTTCAAAGCCGATCGCGTCGTCGAC ATTTCTTTGTCTCAGTGGCTTGCTTTGACTCCACATAGCATTGTCTCCCAGGTTCTCAAGGTTCCGCTCGAATTT GTGCAAGAGCTCAAGAAAAGCAAACAGGTGCTTGTT
Transcript	>Ophio5\|666 ATGCCCAATCTGAAATGGAGTTTCTCTGACTCTTGGACTCAACTCTTCGAAGGTGGCTGGGGTAGAGAGCAGGTG GTTTACGATCTACCTCAGTCACACGACATTGCCGGCGCACAGGAGCATCTGGAGAAGGGCGCCATCCAAGAACTT CACTGGCATAGACTCGCCGAATGGGGCTTCGTATACAAGGGACGGATACTCGTCTCCGTCGTTGACGAGCAAGGC AATCATCAGGTCCAAGAGCTCAACTATGGCGACGTTTGGTATTTCCCAAAGGGCGTCGCGCATACTCTTCAAGGC CTGGACGACGCGAACGAATACCTGATCCTTCTTGACGGTGCTGATGTCAACAAGGCCGGAACAATTTTTCATCTG GACGACTGGGTCGCTCACACGCCCAAAGACATTCTGGCCAAAAACTTTGGTGTTCCCGAGTCGACATTTGACAAG ATACCGCAAAAGCATCCCTACATATTGGCCGGCACCGTAGACCAGACCAACGTGACTGGCGCCCCGGTGCCCATG GCAACCGGTGACAGCACCTACGTCTATCGAACCTTTCAACACGCTCCGGAAAAGATTGGCGGTAACGGGGGAGAA GTCCACAAGATTGACTCTACCAATTTCCCCATCGCAAAGACTATCGCCGCCACCCATATAAGACTCAAGCCTGGT GGTCTCCGTGAACTCCATTGGCACCCGAATGCCGAGGAGTGGATCTATTTTCACCAAGGAACTGCCAAAGGAACC GCCTTCATCGGACAGTCCACAGCTCGCACCTACGACTTTCGGGCCGGCGATGTTGCCGTCTTCCCAGACAATGCT GGGCATTACATCGAAAATACTGGGAAAGAGGATCTCATCTTCTTCGAGTTCTTCAAAGCCGATCGCGTCGTCGAC ATTTCTTTGTCTCAGTGGCTTGCTTTGACTCCACATAGCATTGTCTCCCAGGTTCTCAAGGTTCCGCTCGAATTT GTGCAAGAGCTCAAGAAAAGCAAACAGGTGCTTGTTTGA
Gene	>Ophio5\|666 ATGCCCAATCTGAAATGGAGTTTCTCTGACTCTTGGACTCAACTCTTCGAAGGTGGCTGGGGTAGAGAGCAGGTG GTTTACGATCTACCTCAGTCACACGACATTGCCGGCGCACAGGAGCATCTGGAGAAGGGCGCCATCCAAGAACTT CACTGGCATAGACTCGTACGTAAGCCGTGAAGAAGAGAAGAAGAAGAAAAGGAAAAAAAAAAAGAAAACATTGTC TTACTTGCGCTATAGGCCGAATGGGGCTTCGTATACAAGGGACGGATACTCGTCTCCGTCGTTGACGAGCAAGGC AATCATCAGGTCCAAGAGCTCAACTATGGCGACGTTTGGTATTTCCCAAAGGGCGTCGCGCATACTCTTCAAGGC CTGGACGACGCGAACGAATACCTGATCCTTCTTGACGGTGCTGATGTCAACAAGGCCGGGTAGGTTCATGACTTC CCACCCCGATGAGATGACGCCGATGCTTTCGACTAATTCCCGTCACAGAACAATTTTTCATCTGGACGACTGGGT CGCTCACACGCCCAAAGACATTCTGGCCAAAAACTTTGGTGTTCCCGAGTCGACATTTGACAAGATACCGCAAAA GCATCCCTACATATTGGCCGGCACCGTAGACCAGACCAACGTGACTGGCGCCCCGGTGCCCATGGCAACCGGTGA CAGCACCTACGTCTATCGAACCTTTCAACACGCTCCGGAAAAGATTGGCGGTAACGGGGGAGAAGTCCACAAGAT TGACTCTACCAATTTCCCCATCGCAAAGACTATCGCCGCCACCCATATAAGACTCAAGCCTGGTGGTCTCCGTGA ACTCCATTGGCACCCGAATGTCCGTCTTCACTTCTCTTCATCTTCTCACTGCATCCATGTACGATTCAGGAGCTG ATAAAGTTTTTGCCTGTAGGCCGAGGAGTGGATCTATTTTCACCAAGGAACTGCCAAAGGAACCGCCTTCATCGG ACAGTCCACAGCTCGCACCTACGACTTTCGGGCCGGCGATGTTGCCGTCTTCCCAGACAATGCTGGGTAAAGTTG GAACCTTTCCCCGTCCGTCACAGGCCTAGTGCTGACTGGAAAGGTAGGCATTACATCGAAAATACTGGGAAAGAG GATCTCATCTTCTTCGAGTTCTTCAAAGCCGATCGCGTCGTCGACATTTCTTTGTCTCAGTGGCTTGCTTTGACT CCACATAGCATTGTCTCCCAGGTTCTCAAGGTTCCGCTCGAATTTGTGCAAGAGCTCAAGAAAAGCAAACAGGTG CTTGTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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