Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6656
Gene name
Locationscaffold_598:7701..8515
Strand-
Gene length (bp)814
Transcript length (bp)717
Coding sequence length (bp)714
Protein length (aa) 238

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05773 RWD RWD domain 4.8E-19 4 114
PF16543 DFRP_C DRG Family Regulatory Proteins, Tma46 1.6E-07 132 222

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O94721|YCF9_SCHPO RWD domain-containing protein C1393.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1393.09c PE=3 SV=1 8 204 4.0E-24
sp|Q03768|GIR2_YEAST Protein GIR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIR2 PE=1 SV=1 4 215 2.0E-18
sp|Q9CQK7|RWDD1_MOUSE RWD domain-containing protein 1 OS=Mus musculus GN=Rwdd1 PE=1 SV=1 4 200 8.0E-18
sp|Q9H446|RWDD1_HUMAN RWD domain-containing protein 1 OS=Homo sapiens GN=RWDD1 PE=1 SV=1 4 200 9.0E-18
sp|Q99ND9|RWDD1_RAT RWD domain-containing protein 1 OS=Rattus norvegicus GN=Rwdd1 PE=2 SV=1 4 200 1.0E-17

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal|Nuclear export signal 0.6764 0.5377 0.008 0.0562 0.1092 0.003 0.1396 0.0849 0.1983 0.0019

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1930
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2812
Ophiocordyceps australis map64 (Brazil) OphauB2|7777
Ophiocordyceps camponoti-floridani Ophcf2|07356
Ophiocordyceps camponoti-rufipedis Ophun1|6571
Ophiocordyceps kimflemingae Ophio5|6656 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2063

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6656
MPHEEQVEERQVLESIFPDEITDISETEFRISVTLDTDASPPPPRLLLHVRYPDDYPDIPPHLDLLAHPDDDARH
PYLSVADDRDHLLAELDASVQENLGIAMVFTLVSALRDAAEALVQKRIDHEANVRHEALLAAEREENIKFHGTPV
TPDTFREWRRAFRVEMEEKDRREEEERLAELKRAKIKEPVKLLTGRQLWERGLAGKGDDAADDDDDDDGDADVAL
PTKDMEKLQVEPS
Coding >Ophio5|6656
ATGCCTCACGAGGAGCAGGTCGAGGAGCGTCAAGTCCTCGAATCCATCTTCCCCGATGAAATCACCGACATCTCC
GAGACCGAGTTCCGCATCAGCGTCACCCTCGATACCGACGCCTCCCCGCCTCCGCCCCGACTCCTCCTCCACGTC
CGCTACCCAGACGACTACCCCGACATCCCGCCCCATCTCGACCTGCTCGCCCATCCCGACGATGACGCCCGCCAC
CCCTACCTCAGCGTCGCCGACGATCGCGACCACCTCCTGGCCGAGCTCGACGCTTCCGTCCAGGAGAACCTCGGC
ATCGCCATGGTCTTTACCCTCGTCTCCGCCCTGCGCGATGCCGCCGAAGCCCTTGTTCAGAAGCGTATCGATCAC
GAGGCCAATGTGCGCCACGAGGCCCTCCTCGCTGCCGAGCGTGAAGAGAATATCAAGTTTCACGGAACCCCCGTC
ACGCCCGACACGTTTCGCGAATGGCGCCGCGCGTTCCGTGTCGAGATGGAAGAAAAGGATCGCAGGGAAGAGGAG
GAGCGTCTGGCTGAGCTTAAAAGGGCAAAGATCAAGGAGCCCGTCAAGCTGCTCACGGGAAGGCAGCTCTGGGAG
CGCGGCTTGGCCGGCAAGGGTGACGATGCCGCCGATGACGACGACGATGACGACGGCGATGCTGATGTCGCCCTC
CCTACCAAAGACATGGAGAAGCTGCAGGTCGAGCCGTCG
Transcript >Ophio5|6656
ATGCCTCACGAGGAGCAGGTCGAGGAGCGTCAAGTCCTCGAATCCATCTTCCCCGATGAAATCACCGACATCTCC
GAGACCGAGTTCCGCATCAGCGTCACCCTCGATACCGACGCCTCCCCGCCTCCGCCCCGACTCCTCCTCCACGTC
CGCTACCCAGACGACTACCCCGACATCCCGCCCCATCTCGACCTGCTCGCCCATCCCGACGATGACGCCCGCCAC
CCCTACCTCAGCGTCGCCGACGATCGCGACCACCTCCTGGCCGAGCTCGACGCTTCCGTCCAGGAGAACCTCGGC
ATCGCCATGGTCTTTACCCTCGTCTCCGCCCTGCGCGATGCCGCCGAAGCCCTTGTTCAGAAGCGTATCGATCAC
GAGGCCAATGTGCGCCACGAGGCCCTCCTCGCTGCCGAGCGTGAAGAGAATATCAAGTTTCACGGAACCCCCGTC
ACGCCCGACACGTTTCGCGAATGGCGCCGCGCGTTCCGTGTCGAGATGGAAGAAAAGGATCGCAGGGAAGAGGAG
GAGCGTCTGGCTGAGCTTAAAAGGGCAAAGATCAAGGAGCCCGTCAAGCTGCTCACGGGAAGGCAGCTCTGGGAG
CGCGGCTTGGCCGGCAAGGGTGACGATGCCGCCGATGACGACGACGATGACGACGGCGATGCTGATGTCGCCCTC
CCTACCAAAGACATGGAGAAGCTGCAGGTCGAGCCGTCGTGA
Gene >Ophio5|6656
ATGCCTCACGAGGAGCAGGTCGAGGAGCGTCAAGTCCTCGAATCCATCTTCCCCGATGAAATCACCGGTATCGCC
CTCCCCTCCTTCCTCTCCTCTCCTCTCCTCCCCTCGCCAGCTTCACCACCCTCCCTACCAAAACCACCTCCCTTG
ACCAATGCCACCAGACATCTCCGAGACCGAGTTCCGCATCAGCGTCACCCTCGATACCGACGCCTCCCCGCCTCC
GCCCCGACTCCTCCTCCACGTCCGCTACCCAGACGACTACCCCGACATCCCGCCCCATCTCGACCTGCTCGCCCA
TCCCGACGATGACGCCCGCCACCCCTACCTCAGCGTCGCCGACGATCGCGACCACCTCCTGGCCGAGCTCGACGC
TTCCGTCCAGGAGAACCTCGGCATCGCCATGGTCTTTACCCTCGTCTCCGCCCTGCGCGATGCCGCCGAAGCCCT
TGTTCAGAAGCGTATCGATCACGAGGCCAATGTGCGCCACGAGGCCCTCCTCGCTGCCGAGCGTGAAGAGAATAT
CAAGTTTCACGGAACCCCCGTCACGCCCGACACGTTTCGCGAATGGCGCCGCGCGTTCCGTGTCGAGATGGAAGA
AAAGGATCGCAGGGAAGAGGAGGAGCGTCTGGCTGAGCTTAAAAGGGCAAAGATCAAGGAGCCCGTCAAGCTGCT
CACGGGAAGGCAGCTCTGGGAGCGCGGCTTGGCCGGCAAGGGTGACGATGCCGCCGATGACGACGACGATGACGA
CGGCGATGCTGATGTCGCCCTCCCTACCAAAGACATGGAGAAGCTGCAGGTCGAGCCGTCGTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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