Protein ID | Ophio5|664 |
Gene name | |
Location | scaffold_118:16237..18696 |
Strand | + |
Gene length (bp) | 2459 |
Transcript length (bp) | 2223 |
Coding sequence length (bp) | 2220 |
Protein length (aa) | 740 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide|Transmembrane domain | 0.1226 | 0.0646 | 0.047 | 0.6819 | 0.0234 | 0.0041 | 0.1584 | 0.4858 | 0.3386 | 0.0125 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 44 | 66 | 22 |
2 | 87 | 109 | 22 |
3 | 119 | 141 | 22 |
4 | 556 | 575 | 19 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 0.01 | 0.0 | 0.14 |
CcL | In ants, during behavior modification | 0.08 | 0.0 | 0.26 |
CcD | In ants, recently dead | 0.04 | 0.0 | 0.18 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 1.0 | no |
SC16a | CcD | 1.0 | no |
CcL | CcD | 1.0 | no |
Orthofinder run ID | 4 |
Orthogroup | 79 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|664 MSSSLGDLTTAKLQRQVYLGVWTDWSRGPFMGLTLTLKRPQGSLLIAFTAFFISLVASCFWRILVLFIHRLYSTP APRDALHHQRQVLLRNSITAPSSFWAFSQLWWTWRRSGRDSLMRTLPVILCALFTMAVFAVAGGFSSQISSGISN AALLDGSRCGGILSPRMTRNPEDLAIILPYTVRRNSNAANYAQQCYTAQSAGMLDCATFVQQNLPRKINGQAPCP FKGGICRSNTSNLVLDTGYINSHQHLGVNYPPENRILFKYMLQCAPLETSGYSRTVATSSRNYTRYYYGHQRSGQ DYTTQAKTVDEQYDATDHEPRSANSYPGFILDHAECLNMNRGPYLDNSDFNPIPELFRPDGDLSIFFLSGNGASF MRPTPDPWYRGTVPGKDGVVMNADSSDANMTFTLYRPEEAASPLACLRQYQFCNASHHCGLLGGYLDAWYSSKPF LNTSVLRTRDPVNIYTDPIFWFTDVVASGTNAFTETATSLRGNSLQSQQAFINGIMGILPDNQWQLDVTHWWNTA LAAIQAAFVLTASGPTDPTIAKFNSTIDEPVFGLYITYITGTIIIVVSYTLEPILHYFRRWRNPNKFTYLEWSDG QTLQLQRAAYQGIGCGTWTGYTDAVPTTKRDEILADLYTAYTDPCHDERTEEGNNSLMPSASAMSGDDTLRHQAS QVQESLQELHVSRQECNSSRPPESGSARVSLRGTGDSSSTAERHAITRSLEPGFSSTTEVSRPST |
Coding | >Ophio5|664 ATGAGCAGCTCGCTCGGGGACCTCACGACAGCCAAGCTCCAGCGACAGGTCTATCTTGGCGTATGGACAGACTGG TCTCGGGGGCCCTTCATGGGCCTGACCCTGACGCTCAAGCGGCCTCAGGGCTCCCTTTTAATCGCCTTCACGGCC TTCTTCATCAGCCTCGTCGCCTCCTGCTTCTGGCGAATCCTAGTCCTCTTTATTCACCGGCTCTACTCGACTCCG GCGCCTCGCGACGCTTTACATCACCAACGCCAGGTGCTGCTTCGCAATTCCATCACGGCCCCCTCAAGCTTCTGG GCCTTCTCCCAGCTCTGGTGGACGTGGCGTCGCAGCGGTCGGGATAGCCTTATGCGGACGCTGCCCGTCATCCTC TGCGCTCTCTTTACCATGGCCGTCTTTGCTGTTGCCGGTGGCTTCTCGTCTCAGATTTCCTCGGGAATAAGCAAC GCCGCCTTGCTGGATGGTTCCCGCTGCGGCGGTATTCTTAGCCCCAGAATGACCAGGAACCCGGAAGACCTCGCC ATCATCTTGCCCTATACCGTAAGGCGGAATTCTAATGCCGCCAACTACGCACAGCAGTGCTACACGGCCCAAAGC GCCGGTATGCTCGATTGCGCAACCTTTGTTCAGCAAAACCTACCGAGGAAGATCAACGGCCAAGCTCCTTGTCCT TTTAAAGGGGGCATCTGCCGAAGCAATACTTCTAACTTGGTGCTCGATACCGGCTATATCAACAGTCACCAACAT CTCGGCGTCAACTACCCCCCTGAGAACCGCATTTTATTCAAGTACATGCTGCAATGCGCGCCATTAGAGACGTCT GGATATTCAAGAACGGTCGCCACGTCATCCCGCAACTACACCCGATACTACTATGGTCACCAAAGGAGTGGACAA GACTATACCACACAAGCCAAAACTGTAGATGAACAATACGATGCGACCGACCACGAACCAAGATCGGCAAACTCC TACCCCGGCTTTATTCTCGACCACGCCGAGTGCTTAAACATGAATCGGGGCCCCTATCTGGACAATTCCGACTTT AATCCCATCCCTGAGCTCTTCAGACCTGATGGAGATTTGTCCATTTTCTTCCTGTCGGGAAACGGTGCCTCTTTT ATGAGGCCCACCCCCGACCCCTGGTATCGTGGCACCGTGCCCGGTAAGGATGGTGTGGTCATGAACGCCGACTCT AGTGACGCCAATATGACATTCACCTTGTACCGACCGGAAGAAGCTGCCTCCCCACTGGCATGCCTCCGGCAGTAC CAATTTTGCAATGCATCCCATCATTGTGGCCTCTTGGGTGGTTACCTGGACGCCTGGTATAGCTCTAAGCCCTTC TTGAACACTTCGGTACTGAGAACTAGGGATCCCGTCAACATATATACCGATCCCATCTTTTGGTTCACAGATGTC GTGGCTTCGGGCACGAATGCTTTTACTGAAACGGCTACCAGCCTTCGCGGCAACTCTTTGCAGTCACAACAAGCT TTCATCAATGGCATCATGGGCATCCTGCCAGATAATCAGTGGCAACTCGACGTAACCCATTGGTGGAACACTGCG CTGGCCGCCATCCAAGCCGCCTTCGTCCTGACAGCCTCAGGGCCGACGGACCCAACCATTGCCAAGTTTAACAGC ACAATTGACGAGCCCGTCTTCGGTCTCTACATAACGTACATCACTGGGACCATCATCATAGTCGTCTCGTATACG CTGGAGCCTATTCTTCACTACTTCAGGCGCTGGCGAAACCCCAACAAGTTTACCTACCTAGAATGGTCGGATGGT CAGACGTTGCAGCTGCAGCGCGCCGCTTACCAGGGCATTGGGTGCGGGACCTGGACAGGCTATACTGACGCCGTT CCCACAACCAAGCGTGACGAGATTCTTGCCGACCTGTATACCGCTTACACGGACCCTTGTCACGACGAGAGGACG GAAGAGGGCAACAACTCTCTTATGCCGTCGGCCTCGGCCATGAGCGGTGACGACACTTTGCGGCACCAAGCAAGC CAGGTTCAGGAGAGCTTGCAAGAGCTTCATGTCTCCCGACAAGAATGCAACAGCAGTCGGCCCCCCGAATCAGGG AGCGCTCGCGTGAGTTTGAGGGGTACTGGAGACTCGTCGTCAACTGCTGAGCGCCATGCTATTACCCGGTCTCTC GAGCCTGGCTTCTCTTCGACGACCGAAGTGTCGAGACCATCCACT |
Transcript | >Ophio5|664 ATGAGCAGCTCGCTCGGGGACCTCACGACAGCCAAGCTCCAGCGACAGGTCTATCTTGGCGTATGGACAGACTGG TCTCGGGGGCCCTTCATGGGCCTGACCCTGACGCTCAAGCGGCCTCAGGGCTCCCTTTTAATCGCCTTCACGGCC TTCTTCATCAGCCTCGTCGCCTCCTGCTTCTGGCGAATCCTAGTCCTCTTTATTCACCGGCTCTACTCGACTCCG GCGCCTCGCGACGCTTTACATCACCAACGCCAGGTGCTGCTTCGCAATTCCATCACGGCCCCCTCAAGCTTCTGG GCCTTCTCCCAGCTCTGGTGGACGTGGCGTCGCAGCGGTCGGGATAGCCTTATGCGGACGCTGCCCGTCATCCTC TGCGCTCTCTTTACCATGGCCGTCTTTGCTGTTGCCGGTGGCTTCTCGTCTCAGATTTCCTCGGGAATAAGCAAC GCCGCCTTGCTGGATGGTTCCCGCTGCGGCGGTATTCTTAGCCCCAGAATGACCAGGAACCCGGAAGACCTCGCC ATCATCTTGCCCTATACCGTAAGGCGGAATTCTAATGCCGCCAACTACGCACAGCAGTGCTACACGGCCCAAAGC GCCGGTATGCTCGATTGCGCAACCTTTGTTCAGCAAAACCTACCGAGGAAGATCAACGGCCAAGCTCCTTGTCCT TTTAAAGGGGGCATCTGCCGAAGCAATACTTCTAACTTGGTGCTCGATACCGGCTATATCAACAGTCACCAACAT CTCGGCGTCAACTACCCCCCTGAGAACCGCATTTTATTCAAGTACATGCTGCAATGCGCGCCATTAGAGACGTCT GGATATTCAAGAACGGTCGCCACGTCATCCCGCAACTACACCCGATACTACTATGGTCACCAAAGGAGTGGACAA GACTATACCACACAAGCCAAAACTGTAGATGAACAATACGATGCGACCGACCACGAACCAAGATCGGCAAACTCC TACCCCGGCTTTATTCTCGACCACGCCGAGTGCTTAAACATGAATCGGGGCCCCTATCTGGACAATTCCGACTTT AATCCCATCCCTGAGCTCTTCAGACCTGATGGAGATTTGTCCATTTTCTTCCTGTCGGGAAACGGTGCCTCTTTT ATGAGGCCCACCCCCGACCCCTGGTATCGTGGCACCGTGCCCGGTAAGGATGGTGTGGTCATGAACGCCGACTCT AGTGACGCCAATATGACATTCACCTTGTACCGACCGGAAGAAGCTGCCTCCCCACTGGCATGCCTCCGGCAGTAC CAATTTTGCAATGCATCCCATCATTGTGGCCTCTTGGGTGGTTACCTGGACGCCTGGTATAGCTCTAAGCCCTTC TTGAACACTTCGGTACTGAGAACTAGGGATCCCGTCAACATATATACCGATCCCATCTTTTGGTTCACAGATGTC GTGGCTTCGGGCACGAATGCTTTTACTGAAACGGCTACCAGCCTTCGCGGCAACTCTTTGCAGTCACAACAAGCT TTCATCAATGGCATCATGGGCATCCTGCCAGATAATCAGTGGCAACTCGACGTAACCCATTGGTGGAACACTGCG CTGGCCGCCATCCAAGCCGCCTTCGTCCTGACAGCCTCAGGGCCGACGGACCCAACCATTGCCAAGTTTAACAGC ACAATTGACGAGCCCGTCTTCGGTCTCTACATAACGTACATCACTGGGACCATCATCATAGTCGTCTCGTATACG CTGGAGCCTATTCTTCACTACTTCAGGCGCTGGCGAAACCCCAACAAGTTTACCTACCTAGAATGGTCGGATGGT CAGACGTTGCAGCTGCAGCGCGCCGCTTACCAGGGCATTGGGTGCGGGACCTGGACAGGCTATACTGACGCCGTT CCCACAACCAAGCGTGACGAGATTCTTGCCGACCTGTATACCGCTTACACGGACCCTTGTCACGACGAGAGGACG GAAGAGGGCAACAACTCTCTTATGCCGTCGGCCTCGGCCATGAGCGGTGACGACACTTTGCGGCACCAAGCAAGC CAGGTTCAGGAGAGCTTGCAAGAGCTTCATGTCTCCCGACAAGAATGCAACAGCAGTCGGCCCCCCGAATCAGGG AGCGCTCGCGTGAGTTTGAGGGGTACTGGAGACTCGTCGTCAACTGCTGAGCGCCATGCTATTACCCGGTCTCTC GAGCCTGGCTTCTCTTCGACGACCGAAGTGTCGAGACCATCCACTTGA |
Gene | >Ophio5|664 ATGAGCAGCTCGCTCGGGGACCTCACGACAGCCAAGCTCCAGCGACAGGTCTATCTTGGCGTATGGACAGACTGG TCTCGGGGGCCCTTCATGGGCCTGACCCTGACGCTCAAGCGGCCTCAGGGCTCCCTTTTAATCGCCTTCACGGCC TTCTTCATCAGCCTCGTCGCCTCCTGCTTCTGGCGAATCCTAGTCCTCTTTATTCACCGGCTCTACTCGACTCCG GCGCCTCGCGACGCTTTACATCACCAACGCCAGGTGCTGCTTCGCAATTCCATCACGGCCCCCTCAAGCTTCTGG GCCTTCTCCCAGCTCTGGTGGACGTGGCGTCGCAGCGGTCGGGATAGCCTTATGCGGACGCTGCCCGTCATCCTC TGCGCTCTCTTTACCATGGCCGTCTTTGCTGTTGCCGGTGGCTTCTCGTCTCAGATTTCCTCGGGAATAAGCAAC GCCGCCTTGCTGGATGGTTCCCGCTGCGGCGGTATTCTTAGCCCCAGAATGACCAGGAACCCGGAAGACCTCGCC ATCATCTTGCCCTATACCGTAAGGCGGAATTCTAATGCCGCCAACTACGCACAGCAGTGCTACACGGCCCAAAGC GCCGGTATGCTCGATTGCGCAACCTTTGTTCAGCAAAACCTACCGAGGAAGATCAACGGCCAAGCTCCTTGTCCT TTTAAAGGGGGCATCTGCCGAAGCAATACTTCTAACTTGGTGCTCGATACCGGCTATATCAACAGTCACCAACAT CTCGGTAAGTTCTCTCGCCCCCTATCTTTGTGTATGTGTAGTTGATTCTCTAAACCATGTAGGCGTCAACTACCC CCCTGAGAACCGCATTTTATTCAAGTACATGCTGCAATGCGCGCCATTAGAGACGTCTGGATATTCAAGAACGGT CGCCACGTCATCCCGCAACTACACCCGATACTACTATGGTCACCAAAGGAGTGGACAAGACTATACCACACAAGC CAAAACTGTAGATGAACAATACGATGCGACCGACCACGAACCAAGATCGGCAAACTCCTACCCCGGCTTTATTCT CGAGTACGTTCCATCGCGCGAGATACAGCCAGTCGCTTGATGCAAGCCATGCTGACGTCGTCAAGCCACGCCGAG TGCTTAAACATGAATCGGGGCCCCTATCTGGACAATTCCGACTTTAATCCCATCCCTGAGCTCTTCAGACCTGAT GGAGATTTGTCCATTTTCTTCCTGTCGGGAAACGGTGCCTCTTTTATGAGGCCCACCCCCGACCCCTGGTATCGT GGCACCGTGCCCGGTAAGGATGGTGTGGTCATGAACGCCGACTCTAGTGACGCCAATATGACATTCACCTTGTAC CGACCGGAAGAAGCTGCCTCCCCACTGGCATGCCTCCGGCAGTACCAATTTTGCAATGCATCCCATCATTGTGGC CTCTTGGGTGGTTACCTGGACGCCTGGTATAGCTCTAAGCCCTTCTTGAACACTTCGGTACTGAGAACTAGGGAT CCCGTCAACATATATACCGATCCCATCTTTTGGTTCACAGATGTCGTGGCTTCGGGCACGAATGCTTTTACTGAA ACGGCTACCAGCCTTCGCGGCAACTCTTTGCAGTCACAACAAGCTTTCATCAATGGCATCATGGGCATCCTGCCA GATAATCAGTGGCAACTCGACGTAACCCATTGGTGGAACACTGCGCTGGCCGCCATCCAAGCCGCCTTCGTCCTG ACAGCCTCAGGGCCGACGGACCCAACCATTGCCAAGTTTAACAGCACAATTGACGAGCCGTATATATGTCACAAC CAGGTATCGACCCTGCCTCCCCCCTCTCTAGTGTAAAGCGACTGCTAAGGCACTGATTCGTCATGTAGAAAATAC TGAGCTCCGATTACACGTCATTTAGCGTCTTCGGTCTCTACATAACGTACATCACTGGGACCATCATCATAGTCG TCTCGTATACGCTGGAGCCTATTCTTCACTACTTCAGGCGCTGGCGAAACCCCAACAAGTTTACCTACCTAGAAT GGTCGGATGGTCAGACGTTGCAGCTGCAGCGCGCCGCTTACCAGGGCATTGGGTGCGGGACCTGGACAGGCTATA CTGACGCCGTTCCCACAACCAAGCGTGACGAGATTCTTGCCGACCTGTATACCGCTTACACGGACCCTTGTCACG ACGAGAGGACGGAAGAGGGCAACAACTCTCTTATGCCGTCGGCCTCGGCCATGAGCGGTGACGACACTTTGCGGC ACCAAGCAAGCCAGGTTCAGGAGAGCTTGCAAGAGCTTCATGTCTCCCGACAAGAATGCAACAGCAGTCGGCCCC CCGAATCAGGGAGCGCTCGCGTGAGTTTGAGGGGTACTGGAGACTCGTCGTCAACTGCTGAGCGCCATGCTATTA CCCGGTCTCTCGAGCCTGGCTTCTCTTCGACGACCGAAGTGTCGAGACCATCCACTTGA |