Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6588
Gene name
Locationscaffold_586:10613..11507
Strand-
Gene length (bp)894
Transcript length (bp)894
Coding sequence length (bp)891
Protein length (aa) 297

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01636 APH Phosphotransferase enzyme family 5.6E-06 174 261
PF01163 RIO1 RIO1 family 4.3E-06 158 258

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6588
MTMTDPNLAVTGGPRLRNVISYVLGSLFRFLLRLAGRRLSTRIDQPAQRTHQPICYVPGAEAKPTSPPKAAETRG
SYQCLVDYDSDLFSVRWSGSPQYPDLVGFPYLDSNAAGKISPLSLTPELDRIWKASKLHDHGAHASIRTTNGNNA
FPILKLAHPDDSLSIKLIEREFNVLAELKKLELPVVDFDQQPITCDGVIYGYRMKRLTKLEPGEIHTRWKDVMGV
FSLLHHAGFCHGDFNPSNIMKADNDRLIIIDFSFSGRIGSPVPPFMPTWRFPTGEYCLDQDVAALEGYALPN
Coding >Ophio5|6588
ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG
AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG
CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC
TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT
CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT
AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC
TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC
GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC
GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG
TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT
CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG
TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAAC
Transcript >Ophio5|6588
ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG
AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG
CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC
TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT
CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT
AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC
TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC
GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC
GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG
TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT
CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG
TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAACTAG
Gene >Ophio5|6588
ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG
AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG
CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC
TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT
CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT
AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC
TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC
GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC
GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG
TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT
CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG
TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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