Protein ID | Ophio5|6588 |
Gene name | |
Location | scaffold_586:10613..11507 |
Strand | - |
Gene length (bp) | 894 |
Transcript length (bp) | 894 |
Coding sequence length (bp) | 891 |
Protein length (aa) | 297 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01636 | APH | Phosphotransferase enzyme family | 5.6E-06 | 174 | 261 |
PF01163 | RIO1 | RIO1 family | 4.3E-06 | 158 | 258 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 37 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6588 MTMTDPNLAVTGGPRLRNVISYVLGSLFRFLLRLAGRRLSTRIDQPAQRTHQPICYVPGAEAKPTSPPKAAETRG SYQCLVDYDSDLFSVRWSGSPQYPDLVGFPYLDSNAAGKISPLSLTPELDRIWKASKLHDHGAHASIRTTNGNNA FPILKLAHPDDSLSIKLIEREFNVLAELKKLELPVVDFDQQPITCDGVIYGYRMKRLTKLEPGEIHTRWKDVMGV FSLLHHAGFCHGDFNPSNIMKADNDRLIIIDFSFSGRIGSPVPPFMPTWRFPTGEYCLDQDVAALEGYALPN |
Coding | >Ophio5|6588 ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAAC |
Transcript | >Ophio5|6588 ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAACTAG |
Gene | >Ophio5|6588 ATGACCATGACGGATCCAAACCTCGCCGTGACGGGCGGTCCACGGCTACGAAACGTCATTTCCTATGTCCTAGGG AGCCTTTTCCGCTTCCTGCTGCGACTCGCTGGGCGCCGCCTAAGTACTCGAATCGACCAGCCTGCACAACGGACG CACCAACCGATCTGTTACGTTCCTGGCGCCGAAGCAAAACCGACAAGCCCTCCCAAAGCTGCCGAAACTCGTGGC TCGTACCAATGCCTCGTCGATTATGACTCTGATTTATTCTCAGTCAGATGGTCAGGTTCCCCACAGTACCCGGAT CTCGTCGGCTTTCCCTACCTAGACTCGAACGCCGCCGGGAAGATTAGTCCGCTGTCCTTGACTCCAGAGTTGGAT AGGATCTGGAAGGCTTCGAAACTCCATGATCACGGCGCCCATGCCTCCATAAGAACCACCAATGGCAACAACGCC TTTCCCATCCTCAAACTTGCCCATCCAGACGATAGCTTATCTATCAAACTTATCGAACGAGAATTCAATGTCCTC GCCGAGTTGAAGAAGTTGGAACTCCCTGTAGTGGATTTCGACCAACAACCCATCACCTGCGACGGGGTGATTTAC GGCTACCGAATGAAGAGGCTCACAAAGTTGGAGCCAGGCGAGATTCACACTCGATGGAAGGATGTCATGGGCGTG TTCAGCTTGCTGCATCATGCAGGGTTCTGCCATGGAGACTTCAACCCCAGTAACATCATGAAAGCCGACAATGAT CGTCTCATCATCATCGACTTTAGCTTTTCCGGACGAATTGGCAGCCCGGTGCCGCCCTTTATGCCCACTTGGCGG TTTCCCACTGGTGAATATTGTCTTGACCAGGACGTTGCAGCATTGGAAGGATACGCATTGCCAAACTAG |