Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6574
Gene name
Locationscaffold_584:2480..2861
Strand+
Gene length (bp)381
Transcript length (bp)381
Coding sequence length (bp)378
Protein length (aa) 126

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4B2H3|ALL7_ARTBC Allergen Asp f 7 homolog OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02701 PE=3 SV=1 27 111 2.0E-09

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6574
MPSLLSLSLSLSLSLTLILTTLTPTLCSSLKEKTGDVTWYEPGLGACGETSLKEDAIVAVSPSYFDRHDACSRKL
RVTYHGASLDLRVVDRCAGCAVNDLDLSPSAFKHLVGDLGVGRVAAVWEWI
Coding >Ophio5|6574
ATGCCCTCCCTCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCACCCTCATCCTCACCACCCTCACCCCCACC
CTCTGCTCCTCGCTGAAGGAGAAAACCGGCGACGTGACATGGTACGAGCCCGGCCTCGGCGCCTGCGGCGAAACC
AGCCTCAAGGAAGACGCCATCGTTGCCGTCTCGCCCAGTTACTTCGATCGCCATGACGCTTGCAGCCGTAAGCTC
CGCGTCACCTACCACGGCGCCAGTCTCGACCTCCGCGTCGTCGACCGATGCGCTGGTTGTGCCGTCAACGACCTC
GACCTCTCGCCTTCGGCTTTCAAGCACCTCGTCGGTGATCTCGGCGTTGGACGTGTAGCCGCTGTTTGGGAGTGG
ATT
Transcript >Ophio5|6574
ATGCCCTCCCTCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCACCCTCATCCTCACCACCCTCACCCCCACC
CTCTGCTCCTCGCTGAAGGAGAAAACCGGCGACGTGACATGGTACGAGCCCGGCCTCGGCGCCTGCGGCGAAACC
AGCCTCAAGGAAGACGCCATCGTTGCCGTCTCGCCCAGTTACTTCGATCGCCATGACGCTTGCAGCCGTAAGCTC
CGCGTCACCTACCACGGCGCCAGTCTCGACCTCCGCGTCGTCGACCGATGCGCTGGTTGTGCCGTCAACGACCTC
GACCTCTCGCCTTCGGCTTTCAAGCACCTCGTCGGTGATCTCGGCGTTGGACGTGTAGCCGCTGTTTGGGAGTGG
ATTTAG
Gene >Ophio5|6574
ATGCCCTCCCTCCTCAGCCTCAGCCTCAGCCTCAGCCTCAGCCTCACCCTCATCCTCACCACCCTCACCCCCACC
CTCTGCTCCTCGCTGAAGGAGAAAACCGGCGACGTGACATGGTACGAGCCCGGCCTCGGCGCCTGCGGCGAAACC
AGCCTCAAGGAAGACGCCATCGTTGCCGTCTCGCCCAGTTACTTCGATCGCCATGACGCTTGCAGCCGTAAGCTC
CGCGTCACCTACCACGGCGCCAGTCTCGACCTCCGCGTCGTCGACCGATGCGCTGGTTGTGCCGTCAACGACCTC
GACCTCTCGCCTTCGGCTTTCAAGCACCTCGTCGGTGATCTCGGCGTTGGACGTGTAGCCGCTGTTTGGGAGTGG
ATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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