© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|6566 |
| Gene name | |
| Location | scaffold_582:2396..3239 |
| Strand | - |
| Gene length (bp) | 843 |
| Transcript length (bp) | 678 |
| Coding sequence length (bp) | 675 |
| Protein length (aa) | 225 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08294 | TIM21 | TIM21 | 1.2E-41 | 61 | 205 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4HZ95|TIM21_GIBZE | Mitochondrial import inner membrane translocase subunit TIM21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TIM21 PE=3 SV=1 | 2 | 223 | 1.0E-94 |
| sp|Q7S8S5|TIM21_NEUCR | Mitochondrial import inner membrane translocase subunit tim21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tim21 PE=3 SV=1 | 10 | 223 | 1.0E-74 |
| sp|Q4X1I8|TIM21_ASPFU | Mitochondrial import inner membrane translocase subunit tim21 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tim21 PE=3 SV=1 | 21 | 223 | 2.0E-60 |
| sp|P53220|TIM21_YEAST | Mitochondrial import inner membrane translocase subunit TIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM21 PE=1 SV=1 | 65 | 224 | 3.0E-19 |
| sp|Q6CW96|TIM21_KLULA | Mitochondrial import inner membrane translocase subunit TIM21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM21 PE=3 SV=1 | 66 | 224 | 1.0E-18 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q4HZ95|TIM21_GIBZE | Mitochondrial import inner membrane translocase subunit TIM21 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TIM21 PE=3 SV=1 | 2 | 223 | 1.0E-94 |
| sp|Q7S8S5|TIM21_NEUCR | Mitochondrial import inner membrane translocase subunit tim21 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tim21 PE=3 SV=1 | 10 | 223 | 1.0E-74 |
| sp|Q4X1I8|TIM21_ASPFU | Mitochondrial import inner membrane translocase subunit tim21 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tim21 PE=3 SV=1 | 21 | 223 | 2.0E-60 |
| sp|P53220|TIM21_YEAST | Mitochondrial import inner membrane translocase subunit TIM21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TIM21 PE=1 SV=1 | 65 | 224 | 3.0E-19 |
| sp|Q6CW96|TIM21_KLULA | Mitochondrial import inner membrane translocase subunit TIM21 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM21 PE=3 SV=1 | 66 | 224 | 1.0E-18 |
| sp|Q6CAQ9|TIM21_YARLI | Mitochondrial import inner membrane translocase subunit TIM21 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TIM21 PE=3 SV=1 | 6 | 225 | 2.0E-18 |
| sp|Q75CX4|TIM21_ASHGO | Mitochondrial import inner membrane translocase subunit TIM21 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TIM21 PE=3 SV=1 | 61 | 224 | 6.0E-18 |
| sp|O94618|TIM21_SCHPO | Mitochondrial import inner membrane translocase subunit tim21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tim21 PE=3 SV=1 | 1 | 225 | 7.0E-16 |
| sp|Q6FMZ2|TIM21_CANGA | Mitochondrial import inner membrane translocase subunit TIM21 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TIM21 PE=3 SV=1 | 87 | 224 | 4.0E-13 |
| sp|Q6BVK1|TIM21_DEBHA | Mitochondrial import inner membrane translocase subunit TIM21 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM21 PE=3 SV=2 | 60 | 224 | 5.0E-13 |
| sp|Q9BVV7|TIM21_HUMAN | Mitochondrial import inner membrane translocase subunit Tim21 OS=Homo sapiens GN=TIMM21 PE=1 SV=1 | 74 | 208 | 5.0E-09 |
| sp|Q3SZV6|TIM21_BOVIN | Mitochondrial import inner membrane translocase subunit Tim21 OS=Bos taurus GN=TIMM21 PE=2 SV=1 | 56 | 207 | 2.0E-08 |
| sp|Q5XKA2|TIM21_XENLA | Mitochondrial import inner membrane translocase subunit Tim21 OS=Xenopus laevis GN=timm21 PE=2 SV=1 | 9 | 199 | 1.0E-06 |
| sp|Q5U2X7|TIM21_RAT | Mitochondrial import inner membrane translocase subunit Tim21 OS=Rattus norvegicus GN=Timm21 PE=2 SV=1 | 56 | 210 | 3.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | Yes |
| GO:0030150 | protein import into mitochondrial matrix | Yes |
| GO:1990542 | mitochondrial transmembrane transport | No |
| GO:0033036 | macromolecule localization | No |
| GO:0055085 | transmembrane transport | No |
| GO:0044743 | protein transmembrane import into intracellular organelle | No |
| GO:0051179 | localization | No |
| GO:0006810 | transport | No |
| GO:0006886 | intracellular protein transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0033365 | protein localization to organelle | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0032991 | protein-containing complex | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0098798 | mitochondrial protein-containing complex | No |
| GO:0065002 | intracellular protein transmembrane transport | No |
| GO:0008150 | biological_process | No |
| GO:0070585 | protein localization to mitochondrion | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0072655 | establishment of protein localization to mitochondrion | No |
| GO:0009987 | cellular process | No |
| GO:0051641 | cellular localization | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0008104 | protein localization | No |
| GO:0072594 | establishment of protein localization to organelle | No |
| GO:0071806 | protein transmembrane transport | No |
| GO:0005575 | cellular_component | No |
| GO:0006839 | mitochondrial transport | No |
| GO:0046907 | intracellular transport | No |
| GO:0098800 | inner mitochondrial membrane protein complex | No |
| GO:0071702 | organic substance transport | No |
| GO:0098796 | membrane protein complex | No |
| GO:0015031 | protein transport | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 25 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 69 | 91 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|6566 MLRVIRSTASSSSVPLLVARRTYGSHTSLGATAAPKQRRRSITPFDDNGSVPWRELSATEKMARATQQSFNGGMI VIGLALTGTVAYFLWTDVFSPDSKVSQFNRAVDRIKRDPRCIQLLGDAHKITAHGEETLNKWRRARPLSYSEKVD AQGDSHLLMHFHVDGPLQNGIAQLHMVRRRGESDYGYRYFFVDVKGHERIYLDKARSEPSVGKKQLSLFGVKWGQ |
| Coding | >Ophio5|6566 ATGCTGCGGGTGATTCGATCAACCGCCTCCTCTTCTTCCGTGCCGCTGCTCGTTGCTAGGCGGACATACGGCTCA CATACTAGCCTTGGAGCTACGGCGGCGCCGAAGCAGAGACGGCGGAGCATCACCCCGTTCGACGACAATGGGTCG GTGCCTTGGAGAGAACTCTCTGCGACAGAGAAGATGGCTCGGGCGACGCAGCAGAGCTTCAACGGCGGCATGATC GTCATCGGCCTCGCGCTCACGGGCACCGTCGCTTATTTCCTCTGGACGGACGTATTCTCTCCTGATAGCAAGGTT TCCCAATTCAACCGCGCCGTCGACCGGATCAAGAGGGACCCCAGGTGCATCCAGTTACTGGGAGACGCTCACAAG ATCACGGCCCACGGAGAGGAGACGCTGAACAAGTGGCGGCGGGCTCGCCCTCTTTCATACTCTGAAAAGGTTGAT GCTCAGGGGGACTCCCATCTCCTGATGCACTTTCATGTCGATGGACCGCTGCAGAACGGTATCGCGCAGCTGCAC ATGGTTAGGCGACGGGGGGAGAGCGACTATGGGTACAGGTATTTCTTCGTGGACGTCAAGGGGCACGAGCGCATC TATCTGGACAAGGCACGATCCGAGCCGAGCGTGGGGAAGAAGCAGCTCAGCCTCTTTGGCGTCAAATGGGGCCAG |
| Transcript | >Ophio5|6566 ATGCTGCGGGTGATTCGATCAACCGCCTCCTCTTCTTCCGTGCCGCTGCTCGTTGCTAGGCGGACATACGGCTCA CATACTAGCCTTGGAGCTACGGCGGCGCCGAAGCAGAGACGGCGGAGCATCACCCCGTTCGACGACAATGGGTCG GTGCCTTGGAGAGAACTCTCTGCGACAGAGAAGATGGCTCGGGCGACGCAGCAGAGCTTCAACGGCGGCATGATC GTCATCGGCCTCGCGCTCACGGGCACCGTCGCTTATTTCCTCTGGACGGACGTATTCTCTCCTGATAGCAAGGTT TCCCAATTCAACCGCGCCGTCGACCGGATCAAGAGGGACCCCAGGTGCATCCAGTTACTGGGAGACGCTCACAAG ATCACGGCCCACGGAGAGGAGACGCTGAACAAGTGGCGGCGGGCTCGCCCTCTTTCATACTCTGAAAAGGTTGAT GCTCAGGGGGACTCCCATCTCCTGATGCACTTTCATGTCGATGGACCGCTGCAGAACGGTATCGCGCAGCTGCAC ATGGTTAGGCGACGGGGGGAGAGCGACTATGGGTACAGGTATTTCTTCGTGGACGTCAAGGGGCACGAGCGCATC TATCTGGACAAGGCACGATCCGAGCCGAGCGTGGGGAAGAAGCAGCTCAGCCTCTTTGGCGTCAAATGGGGCCAG TGA |
| Gene | >Ophio5|6566 ATGCTGCGGGTGATTCGATCAACCGCCTCCTCTTCTTCCGTGCCGCTGCTCGTTGCTAGGCGGACATACGGCTCA CATACTAGCCTTGGAGCTACGGCGGCGCCGAAGCAGAGACGGCGGAGCATCACCCCGTTCGACGACAATGGGTCG GTGCCTTGGAGAGAACTCTCTGCGACAGAGAAGATGGCTCGGGCGACGCAGCAGAGCTTCAACGGCGGCATGATC GTCATCGGCCTCGCGCTCACGGTACGGCCTCGGCCTGGTCCTATGCTCGGTAAAGCAGCGCGCTGACACTGGCCA GGGCACCGTCGCTTATTTCCTCTGGACGGACGTATTCTCTCCTGATAGCAAGGTTTCCCAATTCAACCGCGCCGT CGACCGGATCAAGAGGGACCCCAGGTGCATCCAGTTACTGGGAGACGCTCACAAGATCACGGCCCACGGAGAGGA GACGCTGAACAAGTGGCGGCGGGCTCGCCCTCTTTCGTGCGTTGATCTCTGGTTGGTACCTGGCCCGTGTTGTCT GCTGACGCCTTCCCAGATACTCTGAAAAGGTTGATGCTCAGGGGGACTCCCATCTCCTGATGCACTTTCATGTGA GTGCAGTCGCCCTGGCAGGCGCTCAGACGAAGCACTGACGACGACGGCTAGGTCGATGGACCGCTGCAGAACGGT ATCGCGCAGCTGCACATGGTTAGGCGACGGGGGGAGAGCGACTATGGGTACAGGTATTTCTTCGTGGACGTCAAG GGGCACGAGCGCATCTATCTGGACAAGGCACGATCCGAGCCGAGCGTGGGGAAGAAGCAGCTCAGCCTCTTTGGC GTCAAATGGGGCCAGTGA |