Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6559
Gene name
Locationscaffold_580:5101..6456
Strand+
Gene length (bp)1355
Transcript length (bp)1209
Coding sequence length (bp)1206
Protein length (aa) 402

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10568 Tom37 Outer mitochondrial membrane transport complex protein 5.0E-34 22 143

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9UUA5|MTXL_SCHPO Metaxin-like protein C409.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.19c PE=3 SV=1 4 285 2.0E-20
sp|P47802|MTX1_MOUSE Metaxin-1 OS=Mus musculus GN=Mtx1 PE=1 SV=1 3 153 6.0E-09
sp|Q27HK4|MTX1_PIG Metaxin-1 OS=Sus scrofa GN=MTX1 PE=2 SV=1 3 153 2.0E-08
sp|Q2TBS1|MTX1_BOVIN Metaxin-1 OS=Bos taurus GN=MTX1 PE=2 SV=1 3 153 3.0E-08
sp|Q13505|MTX1_HUMAN Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2 3 265 4.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UUA5|MTXL_SCHPO Metaxin-like protein C409.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.19c PE=3 SV=1 4 285 2.0E-20
sp|P47802|MTX1_MOUSE Metaxin-1 OS=Mus musculus GN=Mtx1 PE=1 SV=1 3 153 6.0E-09
sp|Q27HK4|MTX1_PIG Metaxin-1 OS=Sus scrofa GN=MTX1 PE=2 SV=1 3 153 2.0E-08
sp|Q2TBS1|MTX1_BOVIN Metaxin-1 OS=Bos taurus GN=MTX1 PE=2 SV=1 3 153 3.0E-08
sp|Q13505|MTX1_HUMAN Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2 3 265 4.0E-08
sp|Q4R3I0|MTX1_MACFA Metaxin-1 OS=Macaca fascicularis GN=MTX1 PE=2 SV=1 3 153 8.0E-08
sp|Q4VBW0|MTX3_DANRE Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2 3 150 3.0E-07
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GO

GO Term Description Terminal node
GO:0001401 SAM complex Yes
GO:0098796 membrane protein complex No
GO:0032991 protein-containing complex No
GO:0005575 cellular_component No
GO:0098798 mitochondrial protein-containing complex No
GO:0005742 mitochondrial outer membrane translocase complex No
GO:0098799 outer mitochondrial membrane protein complex No

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6559
MVPLELHVWGPALGLASIDAECLAAIAYFRNALPDSRWHLIPSSDPSLNPHHRLPSLHHDGVWVSGYRQIVDHLA
PLADLDRHLTADHQAHVAGLSAFLSDHASSLVDLSLYVSAANWSATTRPAYSAILPFPLTWTLPPLIRAEAISRV
HHLGLAELDPDLASSPGHFRSLNVGRDALPEALRKRVPITTTTTVRHEMTPEQATAIRLSALVNDCLSVLERLLE
SSTSSHFLPHSEASVSSLDCLAYGYLALMLKPDVPRAFLRDWFLARGPRLTEFIDVMTPTELPWLTPEPSHRTLI
GYGVRFFDSVIRNIPTLGDLYADEVRLRARRGIRGLDRRMLTLVAGLTAAGLAVGCAFHAYRSLQPFGAASQVWR
CGRAGTKLSRVHAARAGRGGALESGVD
Coding >Ophio5|6559
ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC
ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG
CATCATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGCCAAATCGTCGACCATCTCGCA
CCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCCGGCCTTTCCGCCTTCTTGTCT
GATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGGTCGGCCACCACTCGGCCCGCC
TACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGCGCCGAGGCAATCAGCCGCGTC
CATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCACTTTCGTTCACTTAATGTCGGT
CGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACTACGGTCCGTCACGAGATGACA
CCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCCGTCTTGGAGCGTCTGCTGGAA
AGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTCGACTGCCTAGCCTACGGCTAC
CTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTTCTCGCCCGCGGTCCGCGACTG
ACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAACCCTCTCACCGTACTTTGATC
GGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGCGACCTCTATGCCGACGAGGTC
AGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTGGTGGCGGGCCTCACCGCGGCG
GGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGCGCCGCCTCCCAAGTGTGGAGG
TGCGGCCGAGCGGGGACCAAGCTGAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGG
GTAGAC
Transcript >Ophio5|6559
ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC
ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG
CATCATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGCCAAATCGTCGACCATCTCGCA
CCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCCGGCCTTTCCGCCTTCTTGTCT
GATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGGTCGGCCACCACTCGGCCCGCC
TACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGCGCCGAGGCAATCAGCCGCGTC
CATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCACTTTCGTTCACTTAATGTCGGT
CGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACTACGGTCCGTCACGAGATGACA
CCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCCGTCTTGGAGCGTCTGCTGGAA
AGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTCGACTGCCTAGCCTACGGCTAC
CTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTTCTCGCCCGCGGTCCGCGACTG
ACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAACCCTCTCACCGTACTTTGATC
GGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGCGACCTCTATGCCGACGAGGTC
AGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTGGTGGCGGGCCTCACCGCGGCG
GGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGCGCCGCCTCCCAAGTGTGGAGG
TGCGGCCGAGCGGGGACCAAGCTGAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGG
GTAGACTAG
Gene >Ophio5|6559
ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC
ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG
CATCGTATGTCTGAATTTTTTTTTTATTTTTTCCCCTCCCCATCCCATCACTTGACATCCCCCATGCCACAACCC
CGCGTGACGCGTGCTGACCGGCAAGATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGC
CAAATCGTCGACCATCTCGCACCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCC
GGCCTTTCCGCCTTCTTGTCTGATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGG
TCGGCCACCACTCGGCCCGCCTACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGC
GCCGAGGCAATCAGCCGCGTCCATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCAC
TTTCGTTCACTTAATGTCGGTCGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACT
ACGGTCCGTCACGAGATGACACCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCC
GTCTTGGAGCGTCTGCTGGAAAGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTC
GACTGCCTAGCCTACGGCTACCTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTT
CTCGCCCGCGGTCCGCGACTGACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAA
CCCTCTCACCGTACTTTGATCGGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGC
GACCTCTATGCCGACGAGGTCAGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTG
GTGGCGGGCCTCACCGCGGCGGGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGC
GCCGCCTCCCAAGTGTGGAGGTGCGGCCGAGCGGGGACCAAGCTGAGGTATGGAGAAGTCGGGTCATTGTTGGGC
GGAGCACTGGGGCTCTATCAAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGGGTAG
ACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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