Protein ID | Ophio5|6559 |
Gene name | |
Location | scaffold_580:5101..6456 |
Strand | + |
Gene length (bp) | 1355 |
Transcript length (bp) | 1209 |
Coding sequence length (bp) | 1206 |
Protein length (aa) | 402 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF10568 | Tom37 | Outer mitochondrial membrane transport complex protein | 5.0E-34 | 22 | 143 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UUA5|MTXL_SCHPO | Metaxin-like protein C409.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.19c PE=3 SV=1 | 4 | 285 | 2.0E-20 |
sp|P47802|MTX1_MOUSE | Metaxin-1 OS=Mus musculus GN=Mtx1 PE=1 SV=1 | 3 | 153 | 6.0E-09 |
sp|Q27HK4|MTX1_PIG | Metaxin-1 OS=Sus scrofa GN=MTX1 PE=2 SV=1 | 3 | 153 | 2.0E-08 |
sp|Q2TBS1|MTX1_BOVIN | Metaxin-1 OS=Bos taurus GN=MTX1 PE=2 SV=1 | 3 | 153 | 3.0E-08 |
sp|Q13505|MTX1_HUMAN | Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2 | 3 | 265 | 4.0E-08 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9UUA5|MTXL_SCHPO | Metaxin-like protein C409.19c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC409.19c PE=3 SV=1 | 4 | 285 | 2.0E-20 |
sp|P47802|MTX1_MOUSE | Metaxin-1 OS=Mus musculus GN=Mtx1 PE=1 SV=1 | 3 | 153 | 6.0E-09 |
sp|Q27HK4|MTX1_PIG | Metaxin-1 OS=Sus scrofa GN=MTX1 PE=2 SV=1 | 3 | 153 | 2.0E-08 |
sp|Q2TBS1|MTX1_BOVIN | Metaxin-1 OS=Bos taurus GN=MTX1 PE=2 SV=1 | 3 | 153 | 3.0E-08 |
sp|Q13505|MTX1_HUMAN | Metaxin-1 OS=Homo sapiens GN=MTX1 PE=1 SV=2 | 3 | 265 | 4.0E-08 |
sp|Q4R3I0|MTX1_MACFA | Metaxin-1 OS=Macaca fascicularis GN=MTX1 PE=2 SV=1 | 3 | 153 | 8.0E-08 |
sp|Q4VBW0|MTX3_DANRE | Metaxin-3 OS=Danio rerio GN=mtx3 PE=2 SV=2 | 3 | 150 | 3.0E-07 |
GO Term | Description | Terminal node |
---|---|---|
GO:0001401 | SAM complex | Yes |
GO:0098796 | membrane protein complex | No |
GO:0032991 | protein-containing complex | No |
GO:0005575 | cellular_component | No |
GO:0098798 | mitochondrial protein-containing complex | No |
GO:0005742 | mitochondrial outer membrane translocase complex | No |
GO:0098799 | outer mitochondrial membrane protein complex | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion|Endoplasmic reticulum | Mitochondrial transit peptide|Peroxisomal targeting signal | 0.1659 | 0.3486 | 0.1759 | 0.0357 | 0.8048 | 0.0499 | 0.6483 | 0.2294 | 0.4023 | 0.4308 |
Orthofinder run ID | 4 |
Orthogroup | 2176 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6559 MVPLELHVWGPALGLASIDAECLAAIAYFRNALPDSRWHLIPSSDPSLNPHHRLPSLHHDGVWVSGYRQIVDHLA PLADLDRHLTADHQAHVAGLSAFLSDHASSLVDLSLYVSAANWSATTRPAYSAILPFPLTWTLPPLIRAEAISRV HHLGLAELDPDLASSPGHFRSLNVGRDALPEALRKRVPITTTTTVRHEMTPEQATAIRLSALVNDCLSVLERLLE SSTSSHFLPHSEASVSSLDCLAYGYLALMLKPDVPRAFLRDWFLARGPRLTEFIDVMTPTELPWLTPEPSHRTLI GYGVRFFDSVIRNIPTLGDLYADEVRLRARRGIRGLDRRMLTLVAGLTAAGLAVGCAFHAYRSLQPFGAASQVWR CGRAGTKLSRVHAARAGRGGALESGVD |
Coding | >Ophio5|6559 ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG CATCATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGCCAAATCGTCGACCATCTCGCA CCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCCGGCCTTTCCGCCTTCTTGTCT GATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGGTCGGCCACCACTCGGCCCGCC TACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGCGCCGAGGCAATCAGCCGCGTC CATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCACTTTCGTTCACTTAATGTCGGT CGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACTACGGTCCGTCACGAGATGACA CCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCCGTCTTGGAGCGTCTGCTGGAA AGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTCGACTGCCTAGCCTACGGCTAC CTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTTCTCGCCCGCGGTCCGCGACTG ACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAACCCTCTCACCGTACTTTGATC GGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGCGACCTCTATGCCGACGAGGTC AGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTGGTGGCGGGCCTCACCGCGGCG GGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGCGCCGCCTCCCAAGTGTGGAGG TGCGGCCGAGCGGGGACCAAGCTGAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGG GTAGAC |
Transcript | >Ophio5|6559 ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG CATCATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGCCAAATCGTCGACCATCTCGCA CCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCCGGCCTTTCCGCCTTCTTGTCT GATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGGTCGGCCACCACTCGGCCCGCC TACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGCGCCGAGGCAATCAGCCGCGTC CATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCACTTTCGTTCACTTAATGTCGGT CGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACTACGGTCCGTCACGAGATGACA CCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCCGTCTTGGAGCGTCTGCTGGAA AGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTCGACTGCCTAGCCTACGGCTAC CTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTTCTCGCCCGCGGTCCGCGACTG ACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAACCCTCTCACCGTACTTTGATC GGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGCGACCTCTATGCCGACGAGGTC AGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTGGTGGCGGGCCTCACCGCGGCG GGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGCGCCGCCTCCCAAGTGTGGAGG TGCGGCCGAGCGGGGACCAAGCTGAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGG GTAGACTAG |
Gene | >Ophio5|6559 ATGGTGCCGCTGGAGCTCCATGTCTGGGGCCCGGCTTTGGGCCTCGCCTCTATCGACGCCGAGTGCCTCGCGGCC ATCGCCTATTTCCGAAACGCCTTGCCCGACTCCCGCTGGCATCTAATTCCAAGCAGCGATCCGTCTCTCAACCCG CATCGTATGTCTGAATTTTTTTTTTATTTTTTCCCCTCCCCATCCCATCACTTGACATCCCCCATGCCACAACCC CGCGTGACGCGTGCTGACCGGCAAGATCGTCTTCCGTCGCTGCATCATGACGGCGTCTGGGTGAGCGGCTATCGC CAAATCGTCGACCATCTCGCACCTTTGGCCGACTTGGACCGTCACCTCACCGCCGACCACCAGGCTCATGTCGCC GGCCTTTCCGCCTTCTTGTCTGATCATGCGTCGTCCCTTGTCGATCTTTCCCTCTATGTCTCGGCCGCAAACTGG TCGGCCACCACTCGGCCCGCCTACAGCGCCATTCTCCCCTTCCCCCTGACCTGGACCCTTCCCCCTTTGATCCGC GCCGAGGCAATCAGCCGCGTCCATCACCTGGGGCTCGCCGAGCTCGACCCCGACTTGGCTTCGAGCCCCGGCCAC TTTCGTTCACTTAATGTCGGTCGAGATGCCCTCCCCGAGGCATTGCGGAAACGGGTGCCCATCACGACGACCACT ACGGTCCGTCACGAGATGACACCGGAACAGGCTACTGCCATCAGGCTCTCGGCCCTCGTCAACGATTGTCTCTCC GTCTTGGAGCGTCTGCTGGAAAGCAGTACATCTTCTCACTTCCTCCCTCATTCCGAGGCCTCTGTATCCTCCCTC GACTGCCTAGCCTACGGCTACCTCGCGCTGATGCTCAAGCCCGACGTGCCGCGTGCCTTCTTGCGTGATTGGTTT CTCGCCCGCGGTCCGCGACTGACGGAATTCATTGACGTCATGACGCCGACAGAACTGCCGTGGCTCACGCCGGAA CCCTCTCACCGTACTTTGATCGGTTACGGCGTCCGCTTTTTTGACTCCGTCATCCGCAACATCCCCACGCTCGGC GACCTCTATGCCGACGAGGTCAGGCTGCGCGCAAGACGGGGGATTCGAGGTCTGGATCGCAGGATGCTGACTCTG GTGGCGGGCCTCACCGCGGCGGGCCTGGCCGTCGGATGCGCCTTCCACGCGTACAGGTCGCTTCAGCCCTTCGGC GCCGCCTCCCAAGTGTGGAGGTGCGGCCGAGCGGGGACCAAGCTGAGGTATGGAGAAGTCGGGTCATTGTTGGGC GGAGCACTGGGGCTCTATCAAGTCGCGTCCATGCCGCCCGTGCCGGCCGGGGCGGGGCGCTTGAATCCGGGGTAG ACTAG |