© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|654 |
| Gene name | |
| Location | scaffold_1177:2059..2483 |
| Strand | - |
| Gene length (bp) | 424 |
| Transcript length (bp) | 339 |
| Coding sequence length (bp) | 336 |
| Protein length (aa) | 112 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | Signal peptide | 0.3782 | 0.2156 | 0.7138 | 0.2001 | 0.3653 | 0.1737 | 0.4822 | 0.2764 | 0.5736 | 0.0509 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 51 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 16197 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|654 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|654 MRALFEKPLGSRASPSAILSHMLLPSLPRRRLAIASLFVVGLFFACFRLAARCGESDGPYCGIGSLRRSDDAFLP TTPPPPPPPGADTDADADANRSAKPDAQAASRESSPT |
| Coding | >Ophio5|654 ATGCGCGCCCTCTTCGAAAAGCCCCTCGGCAGCCGAGCCTCGCCTTCGGCCATTCTCAGCCACATGTTGTTACCA TCGCTTCCTCGCCGGCGGCTCGCCATCGCCAGCCTCTTCGTCGTCGGCCTCTTCTTCGCCTGCTTCCGGCTCGCG GCCCGGTGCGGTGAGAGCGACGGACCATACTGCGGAATTGGCAGCCTGCGCCGGAGCGATGATGCCTTCCTCCCG ACTACGCCGCCGCCGCCGCCGCCGCCCGGAGCCGATACCGATGCCGATGCCGATGCCAACCGTTCGGCGAAGCCC GATGCCCAGGCCGCGTCCCGCGAATCCTCACCAACC |
| Transcript | >Ophio5|654 ATGCGCGCCCTCTTCGAAAAGCCCCTCGGCAGCCGAGCCTCGCCTTCGGCCATTCTCAGCCACATGTTGTTACCA TCGCTTCCTCGCCGGCGGCTCGCCATCGCCAGCCTCTTCGTCGTCGGCCTCTTCTTCGCCTGCTTCCGGCTCGCG GCCCGGTGCGGTGAGAGCGACGGACCATACTGCGGAATTGGCAGCCTGCGCCGGAGCGATGATGCCTTCCTCCCG ACTACGCCGCCGCCGCCGCCGCCGCCCGGAGCCGATACCGATGCCGATGCCGATGCCAACCGTTCGGCGAAGCCC GATGCCCAGGCCGCGTCCCGCGAATCCTCACCAACCTGA |
| Gene | >Ophio5|654 ATGCGCGCCCTCTTCGAAAAGCCCCTCGGCAGCCGAGCCTCGCCTTCGGCCATTCTCAGCCACATGTTGTTACCA TCGCTTCCTCGCCGGCGGCTCGCCATCGCCAGCCTCTTCGTCGTCGGCCTCTTCTTCGCCTGCTTCCGGCTCGCG GCCCGGTGCGGTGAGAGCGACGGACCATACTGCGGAATTGGCAGCCTGCGCCGGAGCGATGATGCCTTCCTCCCG ACTACGCCGCCGCCGCCGCCGCCGCCCGGAGCCGATACCGATGCCGATGCCGATGCCAACCGTTCGGCGAAGCCC GATGCCCAGGCCGCGTCCCGCGAGTGCGCTTCTTTCCCCGACACGTCGCGCGTCGTACTGGTGATGAAGACGGGC GCGTCAGAAGCTTACGCCCGCATCCCGACGCAGATCCTCACCAACCTGA |