Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6538
Gene name
Locationscaffold_579:11161..12378
Strand+
Gene length (bp)1217
Transcript length (bp)798
Coding sequence length (bp)795
Protein length (aa) 265

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 163 180 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6538
MLIVLYSCLSLLPALWGAERGGRARQRLSFALRDSFVAFADSTRQLPAVALHRQPGPLTKAERLFFLRASPEAVS
LCRCSCRRITLAGRETCMSQHVRAGQPFPQEVGNSDKTLFNSGRQDFSARTDCRSRYPAMLSPHTKGRGGTQLDR
NPGKMLQKGPEMALMIWLLVLLVGTKLLTAKKQRRLGTCPISHTGRELLSSIDRQAKAEEPYVTWALCCGTPSRL
ARHLKQKPVPARLTRHHRSHAPPPALSLAAELEWVNIFSP
Coding >Ophio5|6538
ATGCTCATCGTCCTTTACTCATGTCTCAGCCTGCTGCCCGCCCTCTGGGGCGCTGAAAGGGGAGGCCGTGCTCGT
CAACGACTCTCGTTCGCTCTTCGGGATTCATTCGTCGCATTTGCCGACTCAACTCGTCAACTCCCGGCGGTAGCC
CTACACAGACAACCTGGCCCTCTGACGAAAGCTGAAAGGTTATTCTTTTTGCGAGCCTCTCCTGAGGCCGTCTCC
CTGTGCCGCTGCTCCTGTCGCAGAATAACGTTGGCGGGTAGAGAGACATGCATGAGCCAGCACGTGAGAGCCGGC
CAGCCTTTTCCTCAAGAGGTAGGTAATTCAGACAAAACACTGTTCAACAGTGGTCGTCAAGACTTTTCAGCCCGG
ACGGACTGCCGATCCCGCTATCCCGCCATGCTTTCACCACACACAAAAGGGCGTGGGGGCACTCAGCTGGACCGA
AACCCTGGAAAGATGCTACAGAAGGGCCCCGAGATGGCGCTCATGATCTGGCTGTTGGTTCTGCTTGTCGGGACA
AAGCTTTTGACGGCAAAAAAGCAAAGGCGGCTTGGAACATGTCCCATCAGCCATACAGGCCGAGAGCTGCTGTCA
TCCATTGACCGCCAAGCAAAAGCCGAAGAGCCATACGTAACGTGGGCCTTGTGCTGTGGGACCCCATCTCGCCTT
GCACGGCATCTCAAACAGAAACCAGTTCCAGCAAGACTCACCCGCCACCACCGATCCCACGCCCCCCCCCCGGCT
TTGAGCCTGGCAGCCGAGTTGGAATGGGTCAACATCTTCTCCCCT
Transcript >Ophio5|6538
ATGCTCATCGTCCTTTACTCATGTCTCAGCCTGCTGCCCGCCCTCTGGGGCGCTGAAAGGGGAGGCCGTGCTCGT
CAACGACTCTCGTTCGCTCTTCGGGATTCATTCGTCGCATTTGCCGACTCAACTCGTCAACTCCCGGCGGTAGCC
CTACACAGACAACCTGGCCCTCTGACGAAAGCTGAAAGGTTATTCTTTTTGCGAGCCTCTCCTGAGGCCGTCTCC
CTGTGCCGCTGCTCCTGTCGCAGAATAACGTTGGCGGGTAGAGAGACATGCATGAGCCAGCACGTGAGAGCCGGC
CAGCCTTTTCCTCAAGAGGTAGGTAATTCAGACAAAACACTGTTCAACAGTGGTCGTCAAGACTTTTCAGCCCGG
ACGGACTGCCGATCCCGCTATCCCGCCATGCTTTCACCACACACAAAAGGGCGTGGGGGCACTCAGCTGGACCGA
AACCCTGGAAAGATGCTACAGAAGGGCCCCGAGATGGCGCTCATGATCTGGCTGTTGGTTCTGCTTGTCGGGACA
AAGCTTTTGACGGCAAAAAAGCAAAGGCGGCTTGGAACATGTCCCATCAGCCATACAGGCCGAGAGCTGCTGTCA
TCCATTGACCGCCAAGCAAAAGCCGAAGAGCCATACGTAACGTGGGCCTTGTGCTGTGGGACCCCATCTCGCCTT
GCACGGCATCTCAAACAGAAACCAGTTCCAGCAAGACTCACCCGCCACCACCGATCCCACGCCCCCCCCCCGGCT
TTGAGCCTGGCAGCCGAGTTGGAATGGGTCAACATCTTCTCCCCTTGA
Gene >Ophio5|6538
ATGCTCATCGTCCTTTACTCATGTCTCAGCCTGCTGCCCGCCCTCTGGGGCGCTGAAAGGTGAGTCGAAAGTGCG
TCATCCCTTGCATCTTGCATCCATGCCGCGCCCTAGGTAACCTACCTAGGTAAGGTAAGGTAGGTAGGTACTGTA
CGGATTGCTCACCGGCACTTGTTCTCTCTCGCCTGCCGCCTCTCGCCCTTTGTCTCCGAATCTTGTCTTTTGTCA
AGATGCTGTTCCAGATCAACGCCAGCATGGCCAGCATTGGACCGCCCCAGCAGAAAGGAATTGGCTCGGGATGGT
GGCTAAGCGAGATACAGGGGAGGCCGTGCTCGTCAACGACTCTCGTTCGCTCTTCGGGATTCATTCGTCGCATTT
GCCGACTCAACTCGTCAACTCCCGGCGGTAGCCCTACACAGACAGTGCGTCGAATGACGTTCTCGCCGGTCCGGT
CCGGCATGCAGGTCCCGGTGGAAGCTTACTAACAAACGGCTCCTCTCTGAGACCTGGCCCTCTGACGAAAGCTGA
AAGGTTATTCTTTTTGCGAGCCTCTCCTGAGGCCGTCTCCCTGTGCCGCTGCTCCTGTCGCAGAATAACGTTGGC
GGGTAGAGAGACATGCATGAGCCAGCACGTGAGAGCCGGCCAGCCTTTTCCTCAAGAGGTGCCCAGAGGTTGCCT
AGAGGTGCTCCCGAACCCCCCCCGAGCTGACTGACCTTGCTGTGGCGCATCTCTCTTGCCAGGTAGGTAATTCAG
ACAAAACACTGTTCAACAGTGGTCGTCAAGACTTTTCAGCCCGGACGGACTGCCGATCCCGCTATCCCGCCATGC
TTTCACCACACACAAAAGGGCGTGGGGGCACTCAGCTGGACCGAAACCCTGGAAAGATGCTACAGAAGGGCCCCG
AGATGGCGCTCATGATCTGGCTGTTGGTTCTGCTTGTCGGGACAAAGCTTTTGACGGCAAAAAAGCAAAGGCGGC
TTGGAACATGTCCCATCAGCCATACAGGCCGAGAGCTGCTGTCATCCATTGACCGCCAAGCAAAAGCCGAAGAGC
CATACGTAACGTGGGCCTTGTGCTGTGGGACCCCATCTCGCCTTGCACGGCATCTCAAACAGAAACCAGTTCCAG
CAAGACTCACCCGCCACCACCGATCCCACGCCCCCCCCCCGGCTTTGAGCCTGGCAGCCGAGTTGGAATGGGTCA
ACATCTTCTCCCCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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