© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|6534 |
| Gene name | |
| Location | scaffold_579:980..3098 |
| Strand | + |
| Gene length (bp) | 2118 |
| Transcript length (bp) | 2118 |
| Coding sequence length (bp) | 2115 |
| Protein length (aa) | 705 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cell membrane | 0.3828 | 0.1472 | 0.0627 | 0.4099 | 0.1284 | 0.0184 | 0.0931 | 0.3815 | 0.1494 | 0.0087 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 4 | 21 | 17 |
| 2 | 33 | 51 | 18 |
| 3 | 66 | 88 | 22 |
| 4 | 93 | 112 | 19 |
| Orthofinder run ID | 4 |
| Orthogroup | 6085 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|6534 MQVLAGLMLLAVFILGYFAVGPSRSLTNPHHGIGVAIFVLFIIQLVGGRLIRHIVKMRSLRIMVHQWFGRAIALL GIVQVPLGLTLYGSPKFLFVLYALWITFLLLLYFALSYRSAGRRELYMSGGAARSDAGRSRLTESEYLSNNPRPE PGSGLKWLGPLAALGGLALASRRKKARDRSRSRSRSRSRARSRSYSRSRAGDVVHSRRGSESYLSDKDTELVPPR TGRDGRGGFIKVVEGAAAAFGVSKLVSGLTGRRRSGRDDDYSAVSTETPRRHGSGRGAMAPTVSEFSSDYTENYR RGLHDGTNTSFLPPSANPPVLAGEGRRPTTPRPMYARAAAERDDSDYTSYVSPSRRPSAGPSGGGFAKGILSGLG AGWFAKKMADRRSKREDARLREESELRAGTHRPRYTGDGHPSPSRPRTGRDEALSEMTESSVVVPPSAPQHRRSR SRYDAEHVSMPPMPPDPDLPERRASSRRRREGERAAAAAAARASDLAADQDHRHRDAREGQQASSQSRPLSVKLK VHDDRDRNVTLRRLTEAEEEEEAARATRGYGHGARRDSESSMSGLESAGYGRRYRREPSQQGRMERAAERAVERK IKAEEQDQLSPLSPPQPSFAKSARRGKDSAYYSGPGPSGAPSQTASSWESPDSHVTWSQMSGSPAAAKPDSAAGA EDRRRRRRQERRAAAAASTSSRPSGQDMFE |
| Coding | >Ophio5|6534 ATGCAAGTGTTGGCTGGCCTCATGCTGCTCGCCGTCTTCATCCTCGGCTACTTTGCCGTGGGCCCGAGTCGCAGC CTGACGAACCCGCACCATGGAATCGGCGTCGCCATCTTCGTCCTCTTCATCATTCAGTTGGTGGGCGGCCGTCTG ATCCGTCACATCGTCAAGATGCGGTCGCTGCGCATCATGGTTCATCAGTGGTTCGGCCGTGCCATTGCCCTCCTC GGCATCGTCCAGGTTCCCCTAGGCCTCACCCTCTACGGCTCGCCAAAGTTTCTCTTCGTTCTATACGCCTTGTGG ATCACCTTTCTGCTTCTTCTCTACTTTGCCCTGAGTTACAGGTCAGCCGGCCGCCGGGAACTCTACATGAGCGGA GGAGCAGCCCGGTCAGACGCCGGCCGCAGCCGCCTCACCGAGTCCGAGTACCTCTCCAACAATCCCAGGCCCGAG CCGGGAAGTGGTCTCAAGTGGCTCGGCCCGCTGGCGGCCCTTGGCGGCCTGGCACTAGCGTCTCGCCGTAAGAAG GCGCGGGATCGCAGTCGCAGTCGCAGTCGCAGTCGAAGCCGAGCCCGGTCGCGCTCCTACAGCCGAAGCCGTGCC GGAGACGTCGTTCATTCGAGGCGCGGGTCGGAAAGCTATCTGAGCGACAAGGACACGGAGCTGGTCCCCCCGAGA ACCGGACGCGACGGTCGCGGGGGCTTCATCAAGGTGGTCGAGGGCGCGGCCGCCGCTTTCGGCGTCTCCAAGCTC GTTTCCGGCCTGACGGGCCGACGACGGAGCGGACGAGATGACGACTACTCTGCCGTGTCGACGGAGACGCCTCGA CGACATGGCTCCGGCCGGGGCGCCATGGCTCCGACCGTCAGTGAGTTCAGCAGTGACTACACCGAGAACTACCGT CGCGGCCTCCACGACGGCACCAACACGTCTTTCCTGCCGCCGTCGGCGAATCCGCCCGTCTTGGCCGGAGAGGGG CGACGTCCCACGACGCCTCGCCCCATGTACGCGCGCGCCGCTGCCGAGCGGGACGATAGCGACTACACGTCCTAT GTCAGCCCTTCGCGTCGCCCTTCAGCGGGACCATCCGGTGGCGGCTTTGCCAAGGGCATCCTGTCCGGCCTCGGA GCCGGCTGGTTTGCCAAGAAGATGGCCGACAGGCGGAGCAAGAGGGAGGACGCGAGGTTACGCGAGGAAAGCGAG CTGCGGGCCGGGACGCACCGCCCTCGATACACGGGCGACGGACACCCATCGCCGAGCCGACCAAGGACAGGCAGG GACGAAGCCTTGTCTGAGATGACGGAGTCGTCTGTGGTCGTACCGCCATCCGCGCCACAGCACCGACGGTCGCGA TCGAGGTACGATGCCGAGCATGTCTCCATGCCGCCTATGCCGCCCGATCCGGATCTCCCCGAGCGACGGGCATCG TCGCGAAGACGGCGTGAAGGAGAACGCGCGGCGGCAGCGGCAGCAGCGCGGGCTAGCGACCTGGCCGCCGACCAG GACCACAGGCATCGCGATGCCAGGGAAGGCCAACAGGCGTCGTCGCAGAGCCGGCCGCTCAGCGTCAAGCTCAAA GTGCACGACGACCGGGACCGCAACGTGACGCTGAGGCGGCTGACGGAGGCAGAGGAGGAGGAGGAGGCGGCCCGG GCGACTCGCGGATACGGACACGGCGCGCGCCGAGACTCGGAGAGCAGCATGTCCGGTCTCGAGTCGGCTGGCTAC GGCCGACGATACCGGCGCGAGCCGAGCCAGCAGGGACGCATGGAGCGGGCGGCGGAGCGGGCGGTGGAACGCAAG ATCAAGGCTGAGGAGCAGGATCAGCTTTCGCCGCTGTCTCCGCCGCAGCCGTCGTTTGCCAAGTCGGCGCGGCGC GGAAAGGACTCGGCCTATTACTCCGGGCCCGGTCCATCGGGAGCGCCATCGCAGACGGCATCCAGCTGGGAGAGT CCGGACAGCCACGTGACGTGGAGTCAGATGAGCGGCTCGCCGGCGGCCGCGAAGCCGGACTCGGCTGCCGGGGCC GAAGACAGGCGGCGCAGGCGGAGACAGGAGCGGAGGGCAGCGGCGGCGGCGAGCACGTCGAGTCGGCCGTCGGGG CAGGACATGTTTGAG |
| Transcript | >Ophio5|6534 ATGCAAGTGTTGGCTGGCCTCATGCTGCTCGCCGTCTTCATCCTCGGCTACTTTGCCGTGGGCCCGAGTCGCAGC CTGACGAACCCGCACCATGGAATCGGCGTCGCCATCTTCGTCCTCTTCATCATTCAGTTGGTGGGCGGCCGTCTG ATCCGTCACATCGTCAAGATGCGGTCGCTGCGCATCATGGTTCATCAGTGGTTCGGCCGTGCCATTGCCCTCCTC GGCATCGTCCAGGTTCCCCTAGGCCTCACCCTCTACGGCTCGCCAAAGTTTCTCTTCGTTCTATACGCCTTGTGG ATCACCTTTCTGCTTCTTCTCTACTTTGCCCTGAGTTACAGGTCAGCCGGCCGCCGGGAACTCTACATGAGCGGA GGAGCAGCCCGGTCAGACGCCGGCCGCAGCCGCCTCACCGAGTCCGAGTACCTCTCCAACAATCCCAGGCCCGAG CCGGGAAGTGGTCTCAAGTGGCTCGGCCCGCTGGCGGCCCTTGGCGGCCTGGCACTAGCGTCTCGCCGTAAGAAG GCGCGGGATCGCAGTCGCAGTCGCAGTCGCAGTCGAAGCCGAGCCCGGTCGCGCTCCTACAGCCGAAGCCGTGCC GGAGACGTCGTTCATTCGAGGCGCGGGTCGGAAAGCTATCTGAGCGACAAGGACACGGAGCTGGTCCCCCCGAGA ACCGGACGCGACGGTCGCGGGGGCTTCATCAAGGTGGTCGAGGGCGCGGCCGCCGCTTTCGGCGTCTCCAAGCTC GTTTCCGGCCTGACGGGCCGACGACGGAGCGGACGAGATGACGACTACTCTGCCGTGTCGACGGAGACGCCTCGA CGACATGGCTCCGGCCGGGGCGCCATGGCTCCGACCGTCAGTGAGTTCAGCAGTGACTACACCGAGAACTACCGT CGCGGCCTCCACGACGGCACCAACACGTCTTTCCTGCCGCCGTCGGCGAATCCGCCCGTCTTGGCCGGAGAGGGG CGACGTCCCACGACGCCTCGCCCCATGTACGCGCGCGCCGCTGCCGAGCGGGACGATAGCGACTACACGTCCTAT GTCAGCCCTTCGCGTCGCCCTTCAGCGGGACCATCCGGTGGCGGCTTTGCCAAGGGCATCCTGTCCGGCCTCGGA GCCGGCTGGTTTGCCAAGAAGATGGCCGACAGGCGGAGCAAGAGGGAGGACGCGAGGTTACGCGAGGAAAGCGAG CTGCGGGCCGGGACGCACCGCCCTCGATACACGGGCGACGGACACCCATCGCCGAGCCGACCAAGGACAGGCAGG GACGAAGCCTTGTCTGAGATGACGGAGTCGTCTGTGGTCGTACCGCCATCCGCGCCACAGCACCGACGGTCGCGA TCGAGGTACGATGCCGAGCATGTCTCCATGCCGCCTATGCCGCCCGATCCGGATCTCCCCGAGCGACGGGCATCG TCGCGAAGACGGCGTGAAGGAGAACGCGCGGCGGCAGCGGCAGCAGCGCGGGCTAGCGACCTGGCCGCCGACCAG GACCACAGGCATCGCGATGCCAGGGAAGGCCAACAGGCGTCGTCGCAGAGCCGGCCGCTCAGCGTCAAGCTCAAA GTGCACGACGACCGGGACCGCAACGTGACGCTGAGGCGGCTGACGGAGGCAGAGGAGGAGGAGGAGGCGGCCCGG GCGACTCGCGGATACGGACACGGCGCGCGCCGAGACTCGGAGAGCAGCATGTCCGGTCTCGAGTCGGCTGGCTAC GGCCGACGATACCGGCGCGAGCCGAGCCAGCAGGGACGCATGGAGCGGGCGGCGGAGCGGGCGGTGGAACGCAAG ATCAAGGCTGAGGAGCAGGATCAGCTTTCGCCGCTGTCTCCGCCGCAGCCGTCGTTTGCCAAGTCGGCGCGGCGC GGAAAGGACTCGGCCTATTACTCCGGGCCCGGTCCATCGGGAGCGCCATCGCAGACGGCATCCAGCTGGGAGAGT CCGGACAGCCACGTGACGTGGAGTCAGATGAGCGGCTCGCCGGCGGCCGCGAAGCCGGACTCGGCTGCCGGGGCC GAAGACAGGCGGCGCAGGCGGAGACAGGAGCGGAGGGCAGCGGCGGCGGCGAGCACGTCGAGTCGGCCGTCGGGG CAGGACATGTTTGAGTGA |
| Gene | >Ophio5|6534 ATGCAAGTGTTGGCTGGCCTCATGCTGCTCGCCGTCTTCATCCTCGGCTACTTTGCCGTGGGCCCGAGTCGCAGC CTGACGAACCCGCACCATGGAATCGGCGTCGCCATCTTCGTCCTCTTCATCATTCAGTTGGTGGGCGGCCGTCTG ATCCGTCACATCGTCAAGATGCGGTCGCTGCGCATCATGGTTCATCAGTGGTTCGGCCGTGCCATTGCCCTCCTC GGCATCGTCCAGGTTCCCCTAGGCCTCACCCTCTACGGCTCGCCAAAGTTTCTCTTCGTTCTATACGCCTTGTGG ATCACCTTTCTGCTTCTTCTCTACTTTGCCCTGAGTTACAGGTCAGCCGGCCGCCGGGAACTCTACATGAGCGGA GGAGCAGCCCGGTCAGACGCCGGCCGCAGCCGCCTCACCGAGTCCGAGTACCTCTCCAACAATCCCAGGCCCGAG CCGGGAAGTGGTCTCAAGTGGCTCGGCCCGCTGGCGGCCCTTGGCGGCCTGGCACTAGCGTCTCGCCGTAAGAAG GCGCGGGATCGCAGTCGCAGTCGCAGTCGCAGTCGAAGCCGAGCCCGGTCGCGCTCCTACAGCCGAAGCCGTGCC GGAGACGTCGTTCATTCGAGGCGCGGGTCGGAAAGCTATCTGAGCGACAAGGACACGGAGCTGGTCCCCCCGAGA ACCGGACGCGACGGTCGCGGGGGCTTCATCAAGGTGGTCGAGGGCGCGGCCGCCGCTTTCGGCGTCTCCAAGCTC GTTTCCGGCCTGACGGGCCGACGACGGAGCGGACGAGATGACGACTACTCTGCCGTGTCGACGGAGACGCCTCGA CGACATGGCTCCGGCCGGGGCGCCATGGCTCCGACCGTCAGTGAGTTCAGCAGTGACTACACCGAGAACTACCGT CGCGGCCTCCACGACGGCACCAACACGTCTTTCCTGCCGCCGTCGGCGAATCCGCCCGTCTTGGCCGGAGAGGGG CGACGTCCCACGACGCCTCGCCCCATGTACGCGCGCGCCGCTGCCGAGCGGGACGATAGCGACTACACGTCCTAT GTCAGCCCTTCGCGTCGCCCTTCAGCGGGACCATCCGGTGGCGGCTTTGCCAAGGGCATCCTGTCCGGCCTCGGA GCCGGCTGGTTTGCCAAGAAGATGGCCGACAGGCGGAGCAAGAGGGAGGACGCGAGGTTACGCGAGGAAAGCGAG CTGCGGGCCGGGACGCACCGCCCTCGATACACGGGCGACGGACACCCATCGCCGAGCCGACCAAGGACAGGCAGG GACGAAGCCTTGTCTGAGATGACGGAGTCGTCTGTGGTCGTACCGCCATCCGCGCCACAGCACCGACGGTCGCGA TCGAGGTACGATGCCGAGCATGTCTCCATGCCGCCTATGCCGCCCGATCCGGATCTCCCCGAGCGACGGGCATCG TCGCGAAGACGGCGTGAAGGAGAACGCGCGGCGGCAGCGGCAGCAGCGCGGGCTAGCGACCTGGCCGCCGACCAG GACCACAGGCATCGCGATGCCAGGGAAGGCCAACAGGCGTCGTCGCAGAGCCGGCCGCTCAGCGTCAAGCTCAAA GTGCACGACGACCGGGACCGCAACGTGACGCTGAGGCGGCTGACGGAGGCAGAGGAGGAGGAGGAGGCGGCCCGG GCGACTCGCGGATACGGACACGGCGCGCGCCGAGACTCGGAGAGCAGCATGTCCGGTCTCGAGTCGGCTGGCTAC GGCCGACGATACCGGCGCGAGCCGAGCCAGCAGGGACGCATGGAGCGGGCGGCGGAGCGGGCGGTGGAACGCAAG ATCAAGGCTGAGGAGCAGGATCAGCTTTCGCCGCTGTCTCCGCCGCAGCCGTCGTTTGCCAAGTCGGCGCGGCGC GGAAAGGACTCGGCCTATTACTCCGGGCCCGGTCCATCGGGAGCGCCATCGCAGACGGCATCCAGCTGGGAGAGT CCGGACAGCCACGTGACGTGGAGTCAGATGAGCGGCTCGCCGGCGGCCGCGAAGCCGGACTCGGCTGCCGGGGCC GAAGACAGGCGGCGCAGGCGGAGACAGGAGCGGAGGGCAGCGGCGGCGGCGAGCACGTCGAGTCGGCCGTCGGGG CAGGACATGTTTGAGTGA |