Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6508
Gene name
Locationscaffold_572:648..1760
Strand+
Gene length (bp)1112
Transcript length (bp)969
Coding sequence length (bp)966
Protein length (aa) 322

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04488 Gly_transf_sug Glycosyltransferase sugar-binding region containing DXD motif 2.0E-14 86 167

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 66 314 1.0E-49
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 8 288 2.0E-47
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 8 314 5.0E-47
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 62 283 8.0E-41
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 58 280 5.0E-26
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9UT67|IMT2_SCHPO Inositol phosphoceramide mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC4F11.04c PE=3 SV=1 66 314 1.0E-49
sp|P33300|SUR1_YEAST Mannosyl phosphorylinositol ceramide synthase SUR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR1 PE=1 SV=1 8 288 2.0E-47
sp|P38287|CSH1_YEAST Mannosyl phosphorylinositol ceramide synthase CSH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSH1 PE=1 SV=1 8 314 5.0E-47
sp|Q10323|IMT3_SCHPO Inositol phosphoceramide mannosyltransferase 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G8.11c PE=1 SV=1 62 283 8.0E-41
sp|O14084|IMT1_SCHPO Inositol phosphoceramide mannosyltransferase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=imt1 PE=3 SV=2 58 280 5.0E-26
sp|Q5UQW4|YL373_MIMIV Uncharacterized glycosyltransferase L373 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L373 PE=3 SV=1 66 194 4.0E-17
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 12 34 22
2 284 306 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6508
MTSSHARLRRLVVWLVAAGLALILVNFLYRVAVSVNRIFGLHAGRALTQEQVLAVYRDGPRRSRPVPRILHQIFH
NWHDPGNETLPADWQAVRESCLALHPTWEHKLWTEATSRHFIRTEYPHFLDMYDAFKFPVQRVDALRYFLMRHYG
GIYMDLDNGCRASLEPLLYYPAWVTDGGQGTLSNNILGAEPEHPFWILMTDSLAPWAGDFVLPYVTISYATGQWY
ETELWQIYHAQKPNSEPDLLRIMMDMRPTGAPWVFFTAGRGGTWDNWDNQVLGWIGNHLFQSVFYAVVGVGLVAG
AVYLVSQALRRGRYRRLVNQTP
Coding >Ophio5|6508
ATGACCTCGTCGCACGCTCGTCTCCGGCGCCTCGTCGTCTGGCTGGTAGCGGCCGGTCTGGCCCTCATCCTCGTC
AACTTCCTTTACCGAGTCGCCGTCTCCGTCAACCGCATCTTCGGCCTCCATGCCGGTCGGGCCTTGACGCAGGAG
CAGGTCCTCGCCGTCTATCGCGACGGGCCGAGACGGTCCAGACCGGTGCCGCGCATTTTACATCAGATCTTTCAT
AACTGGCATGATCCGGGCAATGAGACGCTGCCGGCGGATTGGCAGGCCGTTCGCGAATCGTGTCTGGCGCTGCAT
CCGACCTGGGAGCACAAGCTCTGGACCGAAGCTACCTCTCGCCACTTCATCCGTACCGAGTATCCCCATTTCCTC
GACATGTACGACGCCTTCAAGTTTCCCGTCCAGCGCGTCGACGCGTTGCGATACTTTCTCATGAGGCACTATGGC
GGCATCTACATGGACCTCGACAACGGCTGTCGAGCCAGTCTCGAACCTCTCCTCTACTACCCAGCCTGGGTAACC
GACGGCGGCCAAGGCACCCTCAGCAATAATATACTCGGCGCCGAACCCGAGCATCCGTTCTGGATCCTCATGACC
GATTCCCTCGCGCCCTGGGCTGGCGACTTTGTCCTGCCGTACGTCACCATCAGCTACGCTACCGGTCAGTGGTAC
GAGACGGAGCTATGGCAGATCTATCACGCCCAGAAGCCGAACAGCGAGCCCGATCTGCTGCGCATCATGATGGAC
ATGCGTCCGACCGGCGCCCCTTGGGTCTTCTTCACCGCCGGCCGTGGCGGCACCTGGGATAACTGGGACAATCAG
GTTCTTGGCTGGATCGGCAACCACCTGTTTCAATCCGTCTTCTATGCCGTCGTCGGTGTCGGCCTCGTTGCTGGC
GCCGTCTACCTCGTCAGCCAAGCCTTGAGGCGAGGACGGTACCGAAGGCTCGTGAACCAGACGCCC
Transcript >Ophio5|6508
ATGACCTCGTCGCACGCTCGTCTCCGGCGCCTCGTCGTCTGGCTGGTAGCGGCCGGTCTGGCCCTCATCCTCGTC
AACTTCCTTTACCGAGTCGCCGTCTCCGTCAACCGCATCTTCGGCCTCCATGCCGGTCGGGCCTTGACGCAGGAG
CAGGTCCTCGCCGTCTATCGCGACGGGCCGAGACGGTCCAGACCGGTGCCGCGCATTTTACATCAGATCTTTCAT
AACTGGCATGATCCGGGCAATGAGACGCTGCCGGCGGATTGGCAGGCCGTTCGCGAATCGTGTCTGGCGCTGCAT
CCGACCTGGGAGCACAAGCTCTGGACCGAAGCTACCTCTCGCCACTTCATCCGTACCGAGTATCCCCATTTCCTC
GACATGTACGACGCCTTCAAGTTTCCCGTCCAGCGCGTCGACGCGTTGCGATACTTTCTCATGAGGCACTATGGC
GGCATCTACATGGACCTCGACAACGGCTGTCGAGCCAGTCTCGAACCTCTCCTCTACTACCCAGCCTGGGTAACC
GACGGCGGCCAAGGCACCCTCAGCAATAATATACTCGGCGCCGAACCCGAGCATCCGTTCTGGATCCTCATGACC
GATTCCCTCGCGCCCTGGGCTGGCGACTTTGTCCTGCCGTACGTCACCATCAGCTACGCTACCGGTCAGTGGTAC
GAGACGGAGCTATGGCAGATCTATCACGCCCAGAAGCCGAACAGCGAGCCCGATCTGCTGCGCATCATGATGGAC
ATGCGTCCGACCGGCGCCCCTTGGGTCTTCTTCACCGCCGGCCGTGGCGGCACCTGGGATAACTGGGACAATCAG
GTTCTTGGCTGGATCGGCAACCACCTGTTTCAATCCGTCTTCTATGCCGTCGTCGGTGTCGGCCTCGTTGCTGGC
GCCGTCTACCTCGTCAGCCAAGCCTTGAGGCGAGGACGGTACCGAAGGCTCGTGAACCAGACGCCCTGA
Gene >Ophio5|6508
ATGACCTCGTCGCACGCTCGTCTCCGGCGCCTCGTCGTCTGGCTGGTAGCGGCCGGTCTGGCCCTCATCCTCGTC
AACTTCCTTTACCGAGTCGCCGTCTCCGTCAACCGCATCTTCGGCCTCCATGCCGGTCGGGCCTTGACGCAGGAG
CAGGTCCTCGCCGTCTATCGCGACGGGCCGAGACGGTCCAGACCGGTGCCGCGCATTTTACATCAGATCTTTCAT
AACTGGCATGATCCGGGCAATGAGACGCTGCCGGCGGATTGGCAGGCCGTTCGCGAATCGTGTCTGGCGCTGCAT
CCGACCTGGGAGCACAAGGTGCGCGCGCCAAGAAGCCCTCTTCATGTTCTCGTTGTTGTTGTTGTTGCTGTGGCT
GATATCGCGAGTTCATAGCTCTGGACCGAAGCTACCTCTCGCCACTTCATCCGTACCGAGTATCCCCATTTCCTC
GACATGTACGACGCCTTCAAGTTTCCCGTCCAGCGCGTCGACGCGTTGCGATACTTTCTCATGAGGCACTATGGC
GGCATCTACATGGACCTCGACAACGTACGGGTCCCTCTCTTCCAAATCATTATGCAAAAATCCCTTGGCTGATGC
CCGTTTGCCGTCTCTAGGGCTGTCGAGCCAGTCTCGAACCTCTCCTCTACTACCCAGCCTGGGTAACCGACGGCG
GCCAAGGCACCCTCAGCAATAATATACTCGGCGCCGAACCCGAGCATCCGTTCTGGATCCTCATGACCGATTCCC
TCGCGCCCTGGGCTGGCGACTTTGTCCTGCCGTACGTCACCATCAGCTACGCTACCGGTCAGTGGTACGAGACGG
AGCTATGGCAGATCTATCACGCCCAGAAGCCGAACAGCGAGCCCGATCTGCTGCGCATCATGATGGACATGCGTC
CGACCGGCGCCCCTTGGGTCTTCTTCACCGCCGGCCGTGGCGGCACCTGGGATAACTGGGACAATCAGGTTCTTG
GCTGGATCGGCAACCACCTGTTTCAATCCGTCTTCTATGCCGTCGTCGGTGTCGGCCTCGTTGCTGGCGCCGTCT
ACCTCGTCAGCCAAGCCTTGAGGCGAGGACGGTACCGAAGGCTCGTGAACCAGACGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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