Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6479
Gene name
Locationscaffold_569:11452..12313
Strand-
Gene length (bp)861
Transcript length (bp)735
Coding sequence length (bp)732
Protein length (aa) 244

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05241 EBP EXPERA (EXPanded EBP superfamily) 1.3E-18 117 225

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 39 240 1.0E-31
sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 39 240 1.0E-29
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 113 243 9.0E-11
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 113 237 2.0E-10
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 120 241 4.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|Q9D0P0|EBPL_MOUSE Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1 39 240 1.0E-31
sp|Q9BY08|EBPL_HUMAN Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1 39 240 1.0E-29
sp|Q60490|EBP_CAVPO 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3 113 243 9.0E-11
sp|Q15125|EBP_HUMAN 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3 113 237 2.0E-10
sp|P70245|EBP_MOUSE 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3 120 241 4.0E-10
sp|Q9FTZ2|EBP_ORYSJ Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1 48 241 5.0E-10
sp|Q9JJ46|EBP_RAT 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3 120 241 7.0E-09
sp|O48962|EBP_ARATH Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1 48 220 9.0E-09
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 47 69 22
3 138 160 22
4 167 186 19
5 206 228 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6479
MDTATTVLPPDLFDRTTLLSLLSTMAMAATAYLTSRRVLSATTPASLRFLFAWHMADALCHFLLEGSFLYHCFFS
SSSSSSLSAVSSSSSSFPTPYNFLGYTDGRLVGPQAGGDNPFALLWMVYARADRRWAGADLGVVSLELLTVFVDG
PLACYVCFLIAKGDPRASFWMVVLATCELYGGFMTFCPEWLTGNVNLNGSNFMYMWIYLVFFNMLWVVIPVYAVC
YSFKDISNAFATRASKKSV
Coding >Ophio5|6479
ATGGACACCGCCACGACGGTCCTCCCACCAGACCTATTCGACCGCACGACGCTCCTCTCCCTCCTATCGACAATG
GCCATGGCGGCAACAGCGTACTTGACCTCCCGCCGAGTACTATCCGCCACGACACCCGCTTCGCTCCGCTTCCTC
TTTGCATGGCACATGGCGGACGCGCTGTGTCACTTTCTGCTAGAAGGCAGCTTCCTCTACCACTGCTTCTTCTCC
TCTTCCTCCTCCTCCTCCTTGTCCGCCGTCTCCTCCTCCTCCTCCTCCTTCCCCACGCCGTACAACTTCCTCGGC
TACACAGACGGTCGACTTGTCGGTCCCCAGGCCGGAGGTGACAATCCATTTGCCCTGCTGTGGATGGTGTACGCG
CGAGCGGATAGGAGGTGGGCTGGTGCTGATCTGGGCGTCGTCAGTTTGGAACTCTTGACGGTTTTTGTCGATGGT
CCGCTGGCTTGCTATGTCTGCTTCCTCATTGCCAAGGGGGATCCGAGGGCGAGCTTTTGGATGGTGGTGCTCGCG
ACGTGTGAGCTTTACGGTGGCTTCATGACGTTTTGCCCTGAATGGTTGACTGGAAATGTCAATCTCAATGGGAGC
AACTTCATGTACATGTGGATTTACCTGGTTTTCTTCAATATGCTGTGGGTGGTGATACCTGTGTACGCTGTTTGT
TATTCGTTCAAGGACATCTCCAATGCTTTTGCGACGAGGGCGTCCAAGAAGAGTGTT
Transcript >Ophio5|6479
ATGGACACCGCCACGACGGTCCTCCCACCAGACCTATTCGACCGCACGACGCTCCTCTCCCTCCTATCGACAATG
GCCATGGCGGCAACAGCGTACTTGACCTCCCGCCGAGTACTATCCGCCACGACACCCGCTTCGCTCCGCTTCCTC
TTTGCATGGCACATGGCGGACGCGCTGTGTCACTTTCTGCTAGAAGGCAGCTTCCTCTACCACTGCTTCTTCTCC
TCTTCCTCCTCCTCCTCCTTGTCCGCCGTCTCCTCCTCCTCCTCCTCCTTCCCCACGCCGTACAACTTCCTCGGC
TACACAGACGGTCGACTTGTCGGTCCCCAGGCCGGAGGTGACAATCCATTTGCCCTGCTGTGGATGGTGTACGCG
CGAGCGGATAGGAGGTGGGCTGGTGCTGATCTGGGCGTCGTCAGTTTGGAACTCTTGACGGTTTTTGTCGATGGT
CCGCTGGCTTGCTATGTCTGCTTCCTCATTGCCAAGGGGGATCCGAGGGCGAGCTTTTGGATGGTGGTGCTCGCG
ACGTGTGAGCTTTACGGTGGCTTCATGACGTTTTGCCCTGAATGGTTGACTGGAAATGTCAATCTCAATGGGAGC
AACTTCATGTACATGTGGATTTACCTGGTTTTCTTCAATATGCTGTGGGTGGTGATACCTGTGTACGCTGTTTGT
TATTCGTTCAAGGACATCTCCAATGCTTTTGCGACGAGGGCGTCCAAGAAGAGTGTTTAG
Gene >Ophio5|6479
ATGGACACCGCCACGACGGTCCTCCCACCAGACCTATTCGACCGCACGACGCTCCTCTCCCTCCTATCGACAATG
GCCATGGCGGCAACAGCGTACTTGACCTCCCGCCGAGTACTATCCGCCACGACACCCGCTTCGCTCCGCTTCCTC
TTTGCATGGCACATGGCGGACGCGCTGTGTCACTTTCTGCTAGAAGGCAGCTTCCTCTACCACTGCTTCTTCTCC
TCTTCCTCCTCCTCCTCCTTGTCCGCCGTCTCCTCCTCCTCCTCCTCCTTCCCCACGCCGTACAACTTCCTCGGC
TACACAGACGGTCGACTTGTCGGTCCCCAGGCCGGAGGTGACAATCCATTTGCCCTGCTGTGGATGGTGTACGCG
CGAGCGGATAGGAGGTGGGCTGGTGCTGATCTGGTGCGTTTCCTGGCCTTCTTCGCATCTGTTATGTCTTCGGCT
GATATTTGGGGGGGGGGGAATAATATAGGGCGTCGTCAGTTTGGAACTCTTGACGGTTTTTGTCGATGGTCCGCT
GGCTTGCTATGTCTGCTTCCTCATTGCCAAGGGGGATCCGAGGGCGAGCTTTTGGATGGTGGTGCTCGCGACGTG
TGAGCTTTACGGTGGTACGTGGGCCGAGGATGTGCATTTGCTGCGGCTTGCTGACTTGGTAGCTACTTAGGCTTC
ATGACGTTTTGCCCTGAATGGTTGACTGGAAATGTCAATCTCAATGGGAGCAACTTCATGTACATGTGGATTTAC
CTGGTTTTCTTCAATATGCTGTGGGTGGTGATACCTGTGTACGCTGTTTGTTATTCGTTCAAGGACATCTCCAAT
GCTTTTGCGACGAGGGCGTCCAAGAAGAGTGTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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