Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6477
Gene name
Locationscaffold_569:6312..8134
Strand-
Gene length (bp)1822
Transcript length (bp)1716
Coding sequence length (bp)1713
Protein length (aa) 571

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 45 67 22
2 95 117 22
3 132 154 22
4 167 189 22
5 209 231 22
6 250 272 22
7 287 309 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6477
MDGAGLWARANDNQLGLSADVVSRMSATAPVDDKTRLKAETSLRTAFVVLAVINALGGAATALGIYIDCRLRARR
KSEPSPRRSPLSVIGTKEMVPFVVSVGIVAQGALFAAAQTSGLDSVLTLGCRPVSQMMLPALFIVPFTQTAFGIE
AMIRSLPRKPMANGPAWTLPVCVGLVLAGLMVSYGVTLVSEPANFCFAELLFLLQRWSVGVFAVLVSIACLLLLC
SIILLFRLYRTADMARPQRTAASWTACYMLLAVITILMTLPFFATLMEDDGVSDITREMMQLSTAATIVVNMTGL
LTGALYLVLRLTRLGRLGYTGYVEYDRQRLKSGIRTVRASSVMYNKQLEQPVSPEWLERREYGTSAQAIPDEKTA
TQWPIQKQAAPRKAGGPSYNLFPQSNPPATVAAAAAGADAAAFLLPPTATWTARHERNSSFGSSATVPIALRVSN
IDNMAVQMMSNSIQQPLQPPSNLGLAISTDGGPFSDSNAAYVASKNVDVFDDGEAEAPTPPPLTVTRATPDASDA
FTLSPSVYSPKTTSTASPEQAPLRTPPASRQRGGEAGRAVASGQWI
Coding >Ophio5|6477
ATGGACGGAGCCGGCCTGTGGGCGAGAGCCAATGACAACCAGCTTGGTTTGTCGGCCGATGTCGTCTCGCGGATG
AGCGCGACGGCGCCCGTCGACGACAAGACGCGGCTCAAGGCCGAGACGTCGCTGCGTACGGCCTTTGTCGTTCTC
GCCGTCATCAATGCCCTGGGTGGAGCGGCGACGGCGCTGGGCATCTATATCGATTGCCGTCTCAGGGCGAGGAGA
AAGTCTGAACCGTCACCCAGAAGGTCACCTCTCAGTGTCATCGGCACCAAGGAGATGGTTCCCTTTGTCGTTTCG
GTCGGCATCGTCGCCCAGGGCGCTCTGTTCGCGGCGGCGCAGACCAGCGGACTGGACTCGGTCCTGACGCTCGGC
TGCCGGCCCGTCTCGCAGATGATGCTGCCAGCCCTCTTCATCGTGCCCTTCACCCAGACGGCTTTTGGCATCGAG
GCCATGATACGATCACTGCCACGAAAGCCAATGGCCAACGGTCCGGCCTGGACGCTGCCCGTCTGTGTCGGCCTG
GTTCTGGCCGGGCTGATGGTCAGCTACGGCGTCACGCTGGTGTCGGAGCCGGCAAACTTTTGCTTCGCCGAGCTG
CTGTTCCTGTTGCAGCGGTGGAGCGTGGGCGTCTTTGCCGTGCTCGTCTCCATTGCCTGCTTGTTACTCCTCTGC
AGCATCATCCTCCTGTTCCGGCTATACCGGACAGCGGACATGGCGCGGCCGCAGCGGACGGCGGCATCGTGGACG
GCCTGCTATATGCTCCTGGCCGTCATCACCATCCTCATGACGTTACCCTTTTTCGCGACGCTGATGGAGGACGAC
GGCGTGTCGGACATCACGCGCGAGATGATGCAGCTTTCGACGGCGGCCACCATCGTCGTCAACATGACGGGCCTC
CTCACCGGCGCCCTCTACCTTGTGCTACGTCTGACGCGGCTCGGCAGGCTGGGCTACACCGGCTACGTCGAGTAT
GACCGGCAGAGGCTCAAGTCGGGCATCCGGACGGTGCGGGCCAGCAGCGTCATGTATAACAAGCAGCTGGAGCAG
CCCGTGTCGCCCGAGTGGCTCGAGCGTCGCGAATATGGGACCAGCGCCCAGGCCATACCGGACGAGAAGACGGCG
ACGCAATGGCCGATACAGAAGCAGGCGGCCCCTCGCAAGGCCGGCGGCCCCTCGTACAACCTCTTCCCTCAATCC
AATCCTCCGGCGACGGTTGCGGCTGCGGCGGCGGGAGCGGACGCTGCCGCGTTCCTGCTCCCTCCTACGGCGACG
TGGACGGCTCGCCATGAGAGAAATTCTTCTTTTGGCTCCTCGGCCACGGTCCCGATCGCTCTGCGCGTCTCCAAT
ATCGACAACATGGCGGTGCAAATGATGAGCAACTCCATTCAACAACCTCTACAACCACCAAGCAACCTCGGACTC
GCCATCAGCACAGATGGCGGGCCCTTTTCCGACTCGAACGCCGCGTACGTGGCGTCGAAAAACGTCGACGTCTTT
GACGACGGAGAGGCGGAGGCTCCCACGCCGCCGCCCCTGACCGTCACCAGGGCCACGCCCGACGCTAGCGACGCC
TTTACTCTCAGCCCTAGCGTCTACAGCCCTAAGACGACGTCGACGGCGTCGCCAGAGCAGGCCCCGCTCCGGACG
CCGCCGGCTAGCCGTCAGCGCGGAGGAGAGGCGGGCCGGGCGGTGGCTTCGGGACAGTGGATC
Transcript >Ophio5|6477
ATGGACGGAGCCGGCCTGTGGGCGAGAGCCAATGACAACCAGCTTGGTTTGTCGGCCGATGTCGTCTCGCGGATG
AGCGCGACGGCGCCCGTCGACGACAAGACGCGGCTCAAGGCCGAGACGTCGCTGCGTACGGCCTTTGTCGTTCTC
GCCGTCATCAATGCCCTGGGTGGAGCGGCGACGGCGCTGGGCATCTATATCGATTGCCGTCTCAGGGCGAGGAGA
AAGTCTGAACCGTCACCCAGAAGGTCACCTCTCAGTGTCATCGGCACCAAGGAGATGGTTCCCTTTGTCGTTTCG
GTCGGCATCGTCGCCCAGGGCGCTCTGTTCGCGGCGGCGCAGACCAGCGGACTGGACTCGGTCCTGACGCTCGGC
TGCCGGCCCGTCTCGCAGATGATGCTGCCAGCCCTCTTCATCGTGCCCTTCACCCAGACGGCTTTTGGCATCGAG
GCCATGATACGATCACTGCCACGAAAGCCAATGGCCAACGGTCCGGCCTGGACGCTGCCCGTCTGTGTCGGCCTG
GTTCTGGCCGGGCTGATGGTCAGCTACGGCGTCACGCTGGTGTCGGAGCCGGCAAACTTTTGCTTCGCCGAGCTG
CTGTTCCTGTTGCAGCGGTGGAGCGTGGGCGTCTTTGCCGTGCTCGTCTCCATTGCCTGCTTGTTACTCCTCTGC
AGCATCATCCTCCTGTTCCGGCTATACCGGACAGCGGACATGGCGCGGCCGCAGCGGACGGCGGCATCGTGGACG
GCCTGCTATATGCTCCTGGCCGTCATCACCATCCTCATGACGTTACCCTTTTTCGCGACGCTGATGGAGGACGAC
GGCGTGTCGGACATCACGCGCGAGATGATGCAGCTTTCGACGGCGGCCACCATCGTCGTCAACATGACGGGCCTC
CTCACCGGCGCCCTCTACCTTGTGCTACGTCTGACGCGGCTCGGCAGGCTGGGCTACACCGGCTACGTCGAGTAT
GACCGGCAGAGGCTCAAGTCGGGCATCCGGACGGTGCGGGCCAGCAGCGTCATGTATAACAAGCAGCTGGAGCAG
CCCGTGTCGCCCGAGTGGCTCGAGCGTCGCGAATATGGGACCAGCGCCCAGGCCATACCGGACGAGAAGACGGCG
ACGCAATGGCCGATACAGAAGCAGGCGGCCCCTCGCAAGGCCGGCGGCCCCTCGTACAACCTCTTCCCTCAATCC
AATCCTCCGGCGACGGTTGCGGCTGCGGCGGCGGGAGCGGACGCTGCCGCGTTCCTGCTCCCTCCTACGGCGACG
TGGACGGCTCGCCATGAGAGAAATTCTTCTTTTGGCTCCTCGGCCACGGTCCCGATCGCTCTGCGCGTCTCCAAT
ATCGACAACATGGCGGTGCAAATGATGAGCAACTCCATTCAACAACCTCTACAACCACCAAGCAACCTCGGACTC
GCCATCAGCACAGATGGCGGGCCCTTTTCCGACTCGAACGCCGCGTACGTGGCGTCGAAAAACGTCGACGTCTTT
GACGACGGAGAGGCGGAGGCTCCCACGCCGCCGCCCCTGACCGTCACCAGGGCCACGCCCGACGCTAGCGACGCC
TTTACTCTCAGCCCTAGCGTCTACAGCCCTAAGACGACGTCGACGGCGTCGCCAGAGCAGGCCCCGCTCCGGACG
CCGCCGGCTAGCCGTCAGCGCGGAGGAGAGGCGGGCCGGGCGGTGGCTTCGGGACAGTGGATCTGA
Gene >Ophio5|6477
ATGGACGGAGCCGGCCTGTGGGCGAGAGCCAATGACAACCAGCTTGGTTTGTCGGCCGATGTCGTCTCGCGGATG
AGCGCGACGGCGCCCGTCGACGACAAGACGCGGCTCAAGGCCGAGACGTCGCTGCGTACGGCCTTTGTCGTTCTC
GCCGTCATCAATGCCCTGGGTGGAGCGGCGACGGCGCTGGGCATCTATATCGATTGCCGTCTCAGGGCGAGGAGA
AAGTCTGAACCGTCACCCAGGTAGGGCGCGAAGCTTCACAAGTTCGGGGCAGGGGACTGACAATACCGCAGAAGG
TCACCTCTCAGTGTCATCGGCACCAAGGAGATGGTTCCCTTTGTCGTTTCGGTCGGCATCGTCGCCCAGGGCGCT
CTGTTCGCGGCGGCGCAGACCAGCGGACTGGACTCGGTCCTGACGCTCGGCTGCCGGCCCGTCTCGCAGATGATG
CTGCCAGGTAAGGACGTGTGCAAGTCGGCAGTATTGAAAACATGACGCTGACGGAGCAGCAGCCCTCTTCATCGT
GCCCTTCACCCAGACGGCTTTTGGCATCGAGGCCATGATACGATCACTGCCACGAAAGCCAATGGCCAACGGTCC
GGCCTGGACGCTGCCCGTCTGTGTCGGCCTGGTTCTGGCCGGGCTGATGGTCAGCTACGGCGTCACGCTGGTGTC
GGAGCCGGCAAACTTTTGCTTCGCCGAGCTGCTGTTCCTGTTGCAGCGGTGGAGCGTGGGCGTCTTTGCCGTGCT
CGTCTCCATTGCCTGCTTGTTACTCCTCTGCAGCATCATCCTCCTGTTCCGGCTATACCGGACAGCGGACATGGC
GCGGCCGCAGCGGACGGCGGCATCGTGGACGGCCTGCTATATGCTCCTGGCCGTCATCACCATCCTCATGACGTT
ACCCTTTTTCGCGACGCTGATGGAGGACGACGGCGTGTCGGACATCACGCGCGAGATGATGCAGCTTTCGACGGC
GGCCACCATCGTCGTCAACATGACGGGCCTCCTCACCGGCGCCCTCTACCTTGTGCTACGTCTGACGCGGCTCGG
CAGGCTGGGCTACACCGGCTACGTCGAGTATGACCGGCAGAGGCTCAAGTCGGGCATCCGGACGGTGCGGGCCAG
CAGCGTCATGTATAACAAGCAGCTGGAGCAGCCCGTGTCGCCCGAGTGGCTCGAGCGTCGCGAATATGGGACCAG
CGCCCAGGCCATACCGGACGAGAAGACGGCGACGCAATGGCCGATACAGAAGCAGGCGGCCCCTCGCAAGGCCGG
CGGCCCCTCGTACAACCTCTTCCCTCAATCCAATCCTCCGGCGACGGTTGCGGCTGCGGCGGCGGGAGCGGACGC
TGCCGCGTTCCTGCTCCCTCCTACGGCGACGTGGACGGCTCGCCATGAGAGAAATTCTTCTTTTGGCTCCTCGGC
CACGGTCCCGATCGCTCTGCGCGTCTCCAATATCGACAACATGGCGGTGCAAATGATGAGCAACTCCATTCAACA
ACCTCTACAACCACCAAGCAACCTCGGACTCGCCATCAGCACAGATGGCGGGCCCTTTTCCGACTCGAACGCCGC
GTACGTGGCGTCGAAAAACGTCGACGTCTTTGACGACGGAGAGGCGGAGGCTCCCACGCCGCCGCCCCTGACCGT
CACCAGGGCCACGCCCGACGCTAGCGACGCCTTTACTCTCAGCCCTAGCGTCTACAGCCCTAAGACGACGTCGAC
GGCGTCGCCAGAGCAGGCCCCGCTCCGGACGCCGCCGGCTAGCCGTCAGCGCGGAGGAGAGGCGGGCCGGGCGGT
GGCTTCGGGACAGTGGATCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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