Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6447
Gene name
Locationscaffold_564:5206..5787
Strand+
Gene length (bp)581
Transcript length (bp)468
Coding sequence length (bp)465
Protein length (aa) 155

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08552 Kei1 Inositolphosphorylceramide synthase subunit Kei1 2.5E-43 16 121

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13994|KEI1_SCHPO Inositol phoshorylceramide synthase regulatory subunit kei1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=kei1 PE=3 SV=1 15 130 1.0E-11
sp|Q06346|KEI1_YEAST Inositol phosphorylceramide synthase regulatory subunit KEI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KEI1 PE=1 SV=2 14 113 8.0E-06

GO

GO Term Description Terminal node
GO:0006673 inositol phosphoceramide metabolic process Yes
GO:0070917 inositol phosphoceramide synthase regulator activity Yes
GO:0044255 cellular lipid metabolic process No
GO:0008150 biological_process No
GO:1901564 organonitrogen compound metabolic process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006644 phospholipid metabolic process No
GO:0006665 sphingolipid metabolic process No
GO:0008152 metabolic process No
GO:0044237 cellular metabolic process No
GO:0003674 molecular_function No
GO:0006793 phosphorus metabolic process No
GO:0071704 organic substance metabolic process No
GO:0009987 cellular process No
GO:0098772 molecular function regulator activity No
GO:0030234 enzyme regulator activity No
GO:0006629 lipid metabolic process No
GO:0019637 organophosphate metabolic process No
GO:0006643 membrane lipid metabolic process No
GO:0006807 nitrogen compound metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 54 76 22
2 88 110 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6447
MTRLTRLLLRIPRPQSLFGVISLQTGTELIALAQVFNKVTGVYGLLAILTGYKLSVLQLSTYIYSIAVLAVVVYL
IPHIRRQSPFECLALAWVYLLDTVINGVYTVAFGLELYLASITVSDIESPPSSSLSSIVAKGLSGLRRESEAPVK
ASILQ
Coding >Ophio5|6447
ATGACAAGATTAACGAGGCTGCTTCTTCGGATACCCCGCCCGCAGAGCCTATTTGGCGTCATCAGCCTCCAGACA
GGCACTGAGCTCATCGCGCTGGCCCAGGTCTTTAACAAGGTCACCGGGGTGTACGGCTTGCTCGCCATTCTCACG
GGCTACAAGTTGTCGGTGCTGCAGCTGTCGACATATATCTACTCCATCGCCGTTCTCGCCGTCGTCGTCTACCTG
ATCCCGCACATCCGACGGCAAAGCCCGTTTGAGTGTCTCGCCCTGGCTTGGGTGTACCTCCTCGACACGGTCATC
AATGGAGTCTATACGGTCGCCTTCGGGCTCGAGCTGTATTTAGCCAGCATCACGGTCAGCGACATAGAGTCGCCG
CCGTCCTCGTCGCTCTCCAGCATCGTCGCCAAGGGTTTGAGCGGATTGCGGCGAGAGAGCGAGGCCCCAGTCAAG
GCGAGTATACTTCAG
Transcript >Ophio5|6447
ATGACAAGATTAACGAGGCTGCTTCTTCGGATACCCCGCCCGCAGAGCCTATTTGGCGTCATCAGCCTCCAGACA
GGCACTGAGCTCATCGCGCTGGCCCAGGTCTTTAACAAGGTCACCGGGGTGTACGGCTTGCTCGCCATTCTCACG
GGCTACAAGTTGTCGGTGCTGCAGCTGTCGACATATATCTACTCCATCGCCGTTCTCGCCGTCGTCGTCTACCTG
ATCCCGCACATCCGACGGCAAAGCCCGTTTGAGTGTCTCGCCCTGGCTTGGGTGTACCTCCTCGACACGGTCATC
AATGGAGTCTATACGGTCGCCTTCGGGCTCGAGCTGTATTTAGCCAGCATCACGGTCAGCGACATAGAGTCGCCG
CCGTCCTCGTCGCTCTCCAGCATCGTCGCCAAGGGTTTGAGCGGATTGCGGCGAGAGAGCGAGGCCCCAGTCAAG
GCGAGTATACTTCAGTAA
Gene >Ophio5|6447
ATGACAAGATTAACGAGGCTGCTTCTTCGGATACCCCGCCCGCAGGTCCGCAGACCCGCATGATGCAGGATGCAG
AGAGTTCGCTGACGCAGTGGACAGAGCCTATTTGGCGTCATCAGCCTCCAGACAGGCACTGAGCTCATCGCGCTG
GCCCAGGTCTTTAACAAGGTCACCGGGGTGTACGGCTTGCTCGCCATTCTCACGGGCTACAAGTTGTCGGTGCTG
CAGCTGTCGACATATATCTACTCCATCGCCGTTCTCGCCGTCGTCGTCTACCTGATCCCGCACATCCGACGGCAA
AGCCCGTTTGAGTGTCTCGCCCTGGCTTGGGTGTACCTCCTCGACACGGTCATCAATGGAGTCTATACGGTCGCC
TTCGGGCTCGAGCTGTATTTAGCCAGCATCACGGTCAGCGACATAGAGTCGCCGCCGTCCTCGTCGCTCTCCAGC
ATCGTCGCCAAGGGTTTGAGCGGATTGCGGCGAGAGAGCGAGGCCCCAGTCAAGGCGGTGGTTCCCCAGGAGACG
GCGACGAGCATGCTCCTGATTGTGGGACTGACGCTTCTCAGAGTATACTTCAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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