Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6423
Gene name
Locationscaffold_56:51749..52615
Strand+
Gene length (bp)866
Transcript length (bp)666
Coding sequence length (bp)663
Protein length (aa) 221

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07960 CBP4 CBP4 8.5E-28 107 211

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7SDU5|CBP4_NEUCR Assembly factor cbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cbp-4 PE=3 SV=1 106 218 2.0E-36
sp|A4RC22|CBP4_MAGO7 Assembly factor CBP4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBP4 PE=3 SV=1 107 218 5.0E-33
sp|Q2H4Y0|CBP4_CHAGB Assembly factor CBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CBP4 PE=3 SV=2 106 218 3.0E-32
sp|A6R620|CBP4_AJECN Assembly factor CBP4 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=CBP4 PE=3 SV=1 103 220 3.0E-28
sp|Q2UE23|CBP4_ASPOR Assembly factor cbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cbp4 PE=3 SV=2 111 221 2.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|Q7SDU5|CBP4_NEUCR Assembly factor cbp-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cbp-4 PE=3 SV=1 106 218 2.0E-36
sp|A4RC22|CBP4_MAGO7 Assembly factor CBP4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CBP4 PE=3 SV=1 107 218 5.0E-33
sp|Q2H4Y0|CBP4_CHAGB Assembly factor CBP4 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CBP4 PE=3 SV=2 106 218 3.0E-32
sp|A6R620|CBP4_AJECN Assembly factor CBP4 OS=Ajellomyces capsulatus (strain NAm1 / WU24) GN=CBP4 PE=3 SV=1 103 220 3.0E-28
sp|Q2UE23|CBP4_ASPOR Assembly factor cbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=cbp4 PE=3 SV=2 111 221 2.0E-27
sp|A1DLB6|CBP4_NEOFI Assembly factor cbp4 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbp4 PE=3 SV=1 111 221 4.0E-27
sp|A1CMM2|CBP4_ASPCL Assembly factor cbp4 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=cbp4 PE=3 SV=1 103 221 2.0E-26
sp|Q0ULB7|CBP4_PHANO Assembly factor CBP4 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=CBP4 PE=3 SV=2 111 214 3.0E-26
sp|A7EJE5|CBP4_SCLS1 Assembly factor cbp4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=cbp4 PE=3 SV=1 101 214 6.0E-26
sp|A2R065|CBP4_ASPNC Assembly factor cbp4 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=cbp4 PE=3 SV=2 111 221 2.0E-25
sp|A6SAY2|CBP4_BOTFB Assembly factor cbp4 OS=Botryotinia fuckeliana (strain B05.10) GN=cbp4 PE=3 SV=1 101 214 3.0E-25
sp|Q1DHX9|CBP4_COCIM Assembly factor CBP4 OS=Coccidioides immitis (strain RS) GN=CBP4 PE=3 SV=1 111 196 6.0E-25
sp|Q0CGN5|CBP4_ASPTN Assembly factor cbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=cbp4 PE=3 SV=1 111 221 8.0E-25
sp|Q5ASG4|CBP4_EMENI Assembly factor cbp4 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cbp4 PE=3 SV=1 111 215 2.0E-22
sp|Q6C5S0|CBP4_YARLI Assembly factor CBP4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CBP4 PE=3 SV=1 116 180 5.0E-08
sp|A3LQD9|CBP4_PICST Assembly factor CBP4 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=CBP4 PE=3 SV=1 108 180 8.0E-08
sp|Q6FVS6|CBP4_CANGA Assembly factor CBP4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CBP4 PE=3 SV=1 108 180 3.0E-07
sp|A5DM93|CBP4_PICGU Assembly factor CBP4 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=CBP4 PE=3 SV=2 108 180 4.0E-07
sp|Q6BI17|CBP4_DEBHA Assembly factor CBP4 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CBP4 PE=3 SV=2 108 180 6.0E-07
sp|A7TFK6|CBP4_VANPO Assembly factor CBP4 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=CBP4 PE=3 SV=1 108 180 2.0E-06
sp|A5DTG8|CBP4_LODEL Assembly factor CBP4 OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=CBP4 PE=3 SV=1 108 180 4.0E-06
sp|P37267|CBP4_YEAST Assembly factor CBP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CBP4 PE=1 SV=3 103 180 9.0E-06
sp|C8Z970|CBP4_YEAS8 Assembly factor CBP4 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=CBP4 PE=3 SV=2 103 180 9.0E-06
sp|A6ZUI6|CBP4_YEAS7 Assembly factor CBP4 OS=Saccharomyces cerevisiae (strain YJM789) GN=CBP4 PE=3 SV=2 103 180 9.0E-06
sp|C7GT24|CBP4_YEAS2 Assembly factor CBP4 OS=Saccharomyces cerevisiae (strain JAY291) GN=CBP4 PE=3 SV=2 103 180 9.0E-06
sp|B3LI56|CBP4_YEAS1 Assembly factor CBP4 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=CBP4 PE=3 SV=2 103 180 9.0E-06
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6423
MTALVRRHVFVTSNELESPSFVEGGPSKEVGWDVGSRFTAFLNCILPICDRKTANDATPQAFASADDHRLIFVFP
PPPPFPPPISEFSLPSLDEARCARRLPMARINWSLWAKVLIGGTLVSVGGPALTMYLTPTEEELRSRYNPDLRKK
SLETREERQQEFNDFVTQLKTHSKSDKPIWIAMKEDEQRRKQAALEAGRTQQREADACRDEMRREAGLGSK
Coding >Ophio5|6423
ATGACGGCCCTCGTACGTCGTCACGTCTTCGTAACGAGCAACGAGTTGGAGTCTCCGTCATTCGTCGAGGGAGGC
CCAAGCAAAGAAGTCGGATGGGATGTCGGATCCCGGTTCACCGCCTTCCTCAATTGTATTCTGCCGATATGCGAT
CGAAAGACTGCCAATGACGCAACTCCTCAAGCCTTTGCATCTGCAGACGATCATCGCCTCATCTTTGTGTTCCCC
CCCCCCCCCCCCTTTCCCCCTCCTATCTCTGAATTCTCTTTGCCATCGCTGGACGAGGCGCGGTGCGCACGACGC
CTGCCAATGGCGCGCATCAACTGGAGCCTCTGGGCCAAGGTGCTGATCGGCGGAACCTTGGTCAGTGTAGGCGGT
CCAGCGCTGACCATGTACCTCACTCCGACGGAAGAGGAGCTTCGGTCGCGGTATAACCCGGACCTGCGCAAGAAG
AGCCTCGAGACGAGAGAGGAACGACAGCAGGAGTTTAATGACTTCGTCACCCAGTTGAAGACTCACTCCAAGTCG
GATAAGCCGATCTGGATCGCCATGAAGGAGGACGAGCAGCGACGCAAACAGGCGGCATTGGAGGCGGGCAGGACG
CAACAGCGCGAGGCGGATGCGTGCCGTGACGAGATGCGGCGCGAGGCAGGTCTGGGGTCAAAG
Transcript >Ophio5|6423
ATGACGGCCCTCGTACGTCGTCACGTCTTCGTAACGAGCAACGAGTTGGAGTCTCCGTCATTCGTCGAGGGAGGC
CCAAGCAAAGAAGTCGGATGGGATGTCGGATCCCGGTTCACCGCCTTCCTCAATTGTATTCTGCCGATATGCGAT
CGAAAGACTGCCAATGACGCAACTCCTCAAGCCTTTGCATCTGCAGACGATCATCGCCTCATCTTTGTGTTCCCC
CCCCCCCCCCCCTTTCCCCCTCCTATCTCTGAATTCTCTTTGCCATCGCTGGACGAGGCGCGGTGCGCACGACGC
CTGCCAATGGCGCGCATCAACTGGAGCCTCTGGGCCAAGGTGCTGATCGGCGGAACCTTGGTCAGTGTAGGCGGT
CCAGCGCTGACCATGTACCTCACTCCGACGGAAGAGGAGCTTCGGTCGCGGTATAACCCGGACCTGCGCAAGAAG
AGCCTCGAGACGAGAGAGGAACGACAGCAGGAGTTTAATGACTTCGTCACCCAGTTGAAGACTCACTCCAAGTCG
GATAAGCCGATCTGGATCGCCATGAAGGAGGACGAGCAGCGACGCAAACAGGCGGCATTGGAGGCGGGCAGGACG
CAACAGCGCGAGGCGGATGCGTGCCGTGACGAGATGCGGCGCGAGGCAGGTCTGGGGTCAAAGTAA
Gene >Ophio5|6423
ATGACGGCCCTCGTGTCTTTCACTCTTTTTTGGGGGGGGCTGCTGCCGATTTGTGTTCTCTTCGTGACGAATTAA
AGACGTCGTCACGTCTTCGTAACGAGCAACGAGTTGGAGTCTCCGTCATTCGTCGAGGGAGGCCCAAGCAAAGAA
GTCGGATGGGATGTCGGATCCCGGTTCACCGCCTTCCTCAATTGTATTCTGCCGATATGCGATCGAAAGACTGCC
AATGACGCAACTCCTCAAGCCTTTGCATCTGCAGACGATCATCGCCTCATCTTTGTGTTCCCCCCCCCCCCCCCC
TTTCCCCCTCCTATCTCTGAATTCTCTTTGCCATCGCTGGACGAGGCGCGGTGCGCACGACGCCTGCCAATGGCG
CGCATCAACTGGAGCCTCTGGGCCAAGGTGCTGATCGGGTACGCCGGAATCCAATCATTGCCTCTGGACAGCAGC
CAGGCCTGACAACAAAGACCGCAACAGCGGAACCTTGGTCAGTGTAGGCGGTCCAGCGCTGACCATGTACCTCAC
TCCGACGGAAGAGGAGCTTCGGTCGCGGTATAACCCGGACCTGCGCAAGAAGAGCCTCGAGACGAGAGAGGAACG
ACAGCAGGAGTTTAATGACTTCGTCACCCAGTTGAAGACTCACTCCAAGTCGGATAAGCCGAGTCCGTTTATAAA
ATTAAACCCCCCCTTTCCCCCTGCTTGTATAAGAAGAGCTCGAGAGCTGACTAGTCTTAGTCTGGATCGCCATGA
AGGAGGACGAGCAGCGACGCAAACAGGCGGCATTGGAGGCGGGCAGGACGCAACAGCGCGAGGCGGATGCGTGCC
GTGACGAGATGCGGCGCGAGGCAGGTCTGGGGTCAAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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