Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6406
Gene name
Locationscaffold_56:12853..14112
Strand+
Gene length (bp)1259
Transcript length (bp)1047
Coding sequence length (bp)1044
Protein length (aa) 348

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6406
MHINSAILAGLLGAVAAQHADHDPSKCSQTSRGLCGKAHQVTPTPGVFLKQFQNMKLHAPEKKLDKSLIPMPTGV
KPTKRELPPTNTTTTTTTTSKPTKQVTLPTTTKPTKKQVTWTNTTMTTTTTTTTTAKRSAKAVTLPSTLTTTAKP
TKKQVTSATATTTTTTKRYRYRIFSELRTIRQEDSPRKWIIKPTGSKNTTSPAPTVKPTGSKNTTSPVPAPTTTP
TILERIKKEIIEKGAKNQTTTTTTTTTKTKKNKTKTKTKTKTTPTKPTLGKPTTTKPSIGKPTTTKPVILTEVHT
TKGTLQFSPRKRGEPSVDKNKDTAPPAPKTSPIAPKRETYLAPVEEED
Coding >Ophio5|6406
ATGCATATCAACAGTGCCATCCTGGCTGGCCTTTTAGGCGCCGTTGCCGCTCAGCACGCTGATCATGATCCCAGC
AAGTGCAGCCAGACGAGTCGTGGCTTGTGCGGGAAAGCTCACCAGGTTACGCCTACGCCTGGCGTCTTTCTGAAG
CAATTTCAAAATATGAAGCTCCATGCTCCCGAGAAAAAGCTCGACAAGTCGCTGATTCCAATGCCGACGGGGGTA
AAGCCCACCAAGAGGGAATTACCGCCCACTAACACGACGACGACGACGACGACGACGTCAAAGCCCACCAAGCAA
GTGACGTTGCCGACGACGACAAAGCCCACCAAGAAGCAAGTGACGTGGACCAATACAACGATGACGACGACGACG
ACGACGACGACGACGGCAAAGCGCTCCGCGAAGGCAGTGACGTTGCCGAGTACATTGACGACGACGGCAAAGCCC
ACCAAGAAGCAAGTGACGTCGGCCACGGCAACGACGACGACGACGACTAAGAGGTATCGTTACCGCATATTCTCC
GAACTCCGGACCATTCGGCAAGAGGACTCGCCGAGAAAGTGGATCATCAAGCCGACCGGCTCGAAGAACACAACC
AGTCCGGCCCCGACCGTGAAGCCGACCGGCTCGAAGAACACAACCAGCCCGGTCCCGGCCCCGACTACCACGCCG
ACCATCCTGGAGCGAATCAAGAAAGAAATCATCGAGAAAGGTGCCAAGAACCAGACGACGACGACGACGACGACG
ACGACCAAGACCAAGAAGAACAAGACCAAGACCAAGACCAAGACCAAGACCACGCCAACCAAGCCTACGCTCGGC
AAGCCCACCACCACCAAGCCTTCGATCGGCAAGCCCACCACCACCAAGCCCGTCATCCTAACCGAGGTCCACACC
ACCAAGGGCACCCTCCAATTCAGCCCACGCAAGCGAGGAGAACCCTCCGTTGACAAGAACAAGGACACGGCTCCC
CCGGCTCCGAAGACGAGCCCCATTGCCCCCAAGCGGGAAACTTATCTCGCCCCGGTTGAGGAAGAAGAC
Transcript >Ophio5|6406
ATGCATATCAACAGTGCCATCCTGGCTGGCCTTTTAGGCGCCGTTGCCGCTCAGCACGCTGATCATGATCCCAGC
AAGTGCAGCCAGACGAGTCGTGGCTTGTGCGGGAAAGCTCACCAGGTTACGCCTACGCCTGGCGTCTTTCTGAAG
CAATTTCAAAATATGAAGCTCCATGCTCCCGAGAAAAAGCTCGACAAGTCGCTGATTCCAATGCCGACGGGGGTA
AAGCCCACCAAGAGGGAATTACCGCCCACTAACACGACGACGACGACGACGACGACGTCAAAGCCCACCAAGCAA
GTGACGTTGCCGACGACGACAAAGCCCACCAAGAAGCAAGTGACGTGGACCAATACAACGATGACGACGACGACG
ACGACGACGACGACGGCAAAGCGCTCCGCGAAGGCAGTGACGTTGCCGAGTACATTGACGACGACGGCAAAGCCC
ACCAAGAAGCAAGTGACGTCGGCCACGGCAACGACGACGACGACGACTAAGAGGTATCGTTACCGCATATTCTCC
GAACTCCGGACCATTCGGCAAGAGGACTCGCCGAGAAAGTGGATCATCAAGCCGACCGGCTCGAAGAACACAACC
AGTCCGGCCCCGACCGTGAAGCCGACCGGCTCGAAGAACACAACCAGCCCGGTCCCGGCCCCGACTACCACGCCG
ACCATCCTGGAGCGAATCAAGAAAGAAATCATCGAGAAAGGTGCCAAGAACCAGACGACGACGACGACGACGACG
ACGACCAAGACCAAGAAGAACAAGACCAAGACCAAGACCAAGACCAAGACCACGCCAACCAAGCCTACGCTCGGC
AAGCCCACCACCACCAAGCCTTCGATCGGCAAGCCCACCACCACCAAGCCCGTCATCCTAACCGAGGTCCACACC
ACCAAGGGCACCCTCCAATTCAGCCCACGCAAGCGAGGAGAACCCTCCGTTGACAAGAACAAGGACACGGCTCCC
CCGGCTCCGAAGACGAGCCCCATTGCCCCCAAGCGGGAAACTTATCTCGCCCCGGTTGAGGAAGAAGACTGA
Gene >Ophio5|6406
ATGCATATCAACAGTGCCATCCTGGCTGGCCTTTTAGGCGCCGTTGCCGCTCAGCACGCTGATCATGATCCCAGC
AAGTGCAGCCAGACGAGTCGTGGCTTGTAAGTCTTCTCATCGTGGAACGTTGAGGAATGACTTCAGAGCTGATCC
TTTTTTTTTCTTCTCCTTCTCTAGGTGCGGGAAAGCTCACCAGGTTACGCCTACGCCTGGCGTCTTTCTGAAGCA
ATTTCAAAATATGAAGCTCCATGTAAGGATATATCCCCCCATGGAAGACCACAGGCACTTGACGGGAAAACGCCA
TGGGCCGGGAGTCTTGTCACGAATGTCAAGAAGGAGGCGGATAAGATTGATGACTCTCTGGTTCACTGACAAAGA
AACCTTTTCAGGCTCCCGAGAAAAAGCTCGACAAGTCGCTGATTCCAATGCCGACGGGGGTAAAGCCCACCAAGA
GGGAATTACCGCCCACTAACACGACGACGACGACGACGACGACGTCAAAGCCCACCAAGCAAGTGACGTTGCCGA
CGACGACAAAGCCCACCAAGAAGCAAGTGACGTGGACCAATACAACGATGACGACGACGACGACGACGACGACGA
CGGCAAAGCGCTCCGCGAAGGCAGTGACGTTGCCGAGTACATTGACGACGACGGCAAAGCCCACCAAGAAGCAAG
TGACGTCGGCCACGGCAACGACGACGACGACGACTAAGAGGTATCGTTACCGCATATTCTCCGAACTCCGGACCA
TTCGGCAAGAGGACTCGCCGAGAAAGTGGATCATCAAGCCGACCGGCTCGAAGAACACAACCAGTCCGGCCCCGA
CCGTGAAGCCGACCGGCTCGAAGAACACAACCAGCCCGGTCCCGGCCCCGACTACCACGCCGACCATCCTGGAGC
GAATCAAGAAAGAAATCATCGAGAAAGGTGCCAAGAACCAGACGACGACGACGACGACGACGACGACCAAGACCA
AGAAGAACAAGACCAAGACCAAGACCAAGACCAAGACCACGCCAACCAAGCCTACGCTCGGCAAGCCCACCACCA
CCAAGCCTTCGATCGGCAAGCCCACCACCACCAAGCCCGTCATCCTAACCGAGGTCCACACCACCAAGGGCACCC
TCCAATTCAGCCCACGCAAGCGAGGAGAACCCTCCGTTGACAAGAACAAGGACACGGCTCCCCCGGCTCCGAAGA
CGAGCCCCATTGCCCCCAAGCGGGAAACTTATCTCGCCCCGGTTGAGGAAGAAGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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