Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6401
Gene name
Locationscaffold_56:4571..5757
Strand-
Gene length (bp)1186
Transcript length (bp)1083
Coding sequence length (bp)1080
Protein length (aa) 360

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19445 eIF3h_C C-terminal region of eIF3h 2.7E-15 146 206
PF19445 eIF3h_C C-terminal region of eIF3h 1.4E-23 238 352
PF01398 JAB JAB1/Mov34/MPN/PAD-1 ubiquitin protease 5.9E-05 11 132

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q7S9Y9|EIF3H_NEUCR Eukaryotic translation initiation factor 3 subunit H OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=eif3h PE=3 SV=1 1 360 0.0E+00
sp|Q2GZK0|EIF3H_CHAGB Eukaryotic translation initiation factor 3 subunit H OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CHGG_05046 PE=3 SV=1 26 360 0.0E+00
sp|A7E7B3|EIF3H_SCLS1 Eukaryotic translation initiation factor 3 subunit H OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_01190 PE=3 SV=1 4 360 0.0E+00
sp|A6RQZ9|EIF3H_BOTFB Eukaryotic translation initiation factor 3 subunit H OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_03240 PE=3 SV=1 6 360 2.0E-179
sp|A4QT78|EIF3H_MAGO7 Eukaryotic translation initiation factor 3 subunit H OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_05156 PE=3 SV=1 1 360 3.0E-177
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Swissprot ID Swissprot Description Start End E-value
sp|Q7S9Y9|EIF3H_NEUCR Eukaryotic translation initiation factor 3 subunit H OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=eif3h PE=3 SV=1 1 360 0.0E+00
sp|Q2GZK0|EIF3H_CHAGB Eukaryotic translation initiation factor 3 subunit H OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=CHGG_05046 PE=3 SV=1 26 360 0.0E+00
sp|A7E7B3|EIF3H_SCLS1 Eukaryotic translation initiation factor 3 subunit H OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_01190 PE=3 SV=1 4 360 0.0E+00
sp|A6RQZ9|EIF3H_BOTFB Eukaryotic translation initiation factor 3 subunit H OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_03240 PE=3 SV=1 6 360 2.0E-179
sp|A4QT78|EIF3H_MAGO7 Eukaryotic translation initiation factor 3 subunit H OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MGG_05156 PE=3 SV=1 1 360 3.0E-177
sp|Q0UMR2|EIF3H_PHANO Eukaryotic translation initiation factor 3 subunit H OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) GN=SNOG_06952 PE=3 SV=3 1 359 6.0E-167
sp|Q1DHB6|EIF3H_COCIM Eukaryotic translation initiation factor 3 subunit H OS=Coccidioides immitis (strain RS) GN=CIMG_10297 PE=3 SV=2 6 359 6.0E-159
sp|A1CQB4|EIF3H_ASPCL Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_025520 PE=3 SV=1 6 359 1.0E-156
sp|Q4WTA6|EIF3H_ASPFU Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_1G09970 PE=3 SV=1 7 359 2.0E-156
sp|B0XQB9|EIF3H_ASPFC Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_009410 PE=3 SV=1 7 359 2.0E-156
sp|Q0D1J4|EIF3H_ASPTN Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_00190 PE=3 SV=1 6 359 7.0E-156
sp|Q5BDW0|EIF3H_EMENI Eukaryotic translation initiation factor 3 subunit H OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN1270 PE=3 SV=2 9 359 6.0E-155
sp|Q2U2J1|EIF3H_ASPOR Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090038000435 PE=3 SV=1 6 359 2.0E-153
sp|A2QQA2|EIF3H_ASPNC Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g01790 PE=3 SV=1 6 359 4.0E-152
sp|A1D379|EIF3H_NEOFI Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_015650 PE=3 SV=1 21 359 2.0E-148
sp|Q6C1I3|EIF3H_YARLI Eukaryotic translation initiation factor 3 subunit H OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0F16005g PE=3 SV=1 13 358 1.0E-81
sp|Q9UT48|EIF3H_SCHPO Eukaryotic translation initiation factor 3 subunit H OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eif3h PE=1 SV=1 9 354 4.0E-75
sp|Q4PI64|EIF3H_USTMA Eukaryotic translation initiation factor 3 subunit H OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_00199 PE=3 SV=1 12 339 7.0E-68
sp|Q9C5Z2|EIF3H_ARATH Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=1 SV=2 9 354 4.0E-64
sp|A7SA47|EIF3H_NEMVE Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis GN=v1g168210 PE=3 SV=1 2 351 1.0E-57
sp|Q9GV27|EIF3H_BOMMO Eukaryotic translation initiation factor 3 subunit H OS=Bombyx mori PE=2 SV=1 13 351 5.0E-54
sp|Q5PPY6|EIF3H_XENLA Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1 13 351 9.0E-54
sp|B5RI54|EIF3H_SALSA Eukaryotic translation initiation factor 3 subunit H OS=Salmo salar GN=eif3h PE=2 SV=1 7 351 9.0E-54
sp|Q6AXJ2|EI3HA_DANRE Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio GN=eif3ha PE=2 SV=1 5 351 1.0E-51
sp|Q54UD0|EIF3H_DICDI Eukaryotic translation initiation factor 3 subunit H OS=Dictyostelium discoideum GN=eif3H PE=3 SV=1 7 355 6.0E-51
sp|Q5PR67|EI3HB_DANRE Eukaryotic translation initiation factor 3 subunit H-B OS=Danio rerio GN=eif3hb PE=2 SV=2 3 351 2.0E-50
sp|O15372|EIF3H_HUMAN Eukaryotic translation initiation factor 3 subunit H OS=Homo sapiens GN=EIF3H PE=1 SV=1 7 351 4.0E-50
sp|Q56JZ5|EIF3H_BOVIN Eukaryotic translation initiation factor 3 subunit H OS=Bos taurus GN=EIF3H PE=2 SV=1 7 351 9.0E-50
sp|Q6P381|EIF3H_XENTR Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1 13 351 1.0E-49
sp|Q91WK2|EIF3H_MOUSE Eukaryotic translation initiation factor 3 subunit H OS=Mus musculus GN=Eif3h PE=1 SV=1 7 351 1.0E-49
sp|Q170C2|EIF3H_AEDAE Eukaryotic translation initiation factor 3 subunit H OS=Aedes aegypti GN=AAEL007945 PE=2 SV=1 7 351 4.0E-49
sp|Q6P9U8|EIF3H_RAT Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus GN=Eif3h PE=1 SV=1 7 351 6.0E-49
sp|B0WDA9|EIF3H_CULQU Eukaryotic translation initiation factor 3 subunit H OS=Culex quinquefasciatus GN=CPIJ005299 PE=3 SV=1 7 351 7.0E-49
sp|B5FY35|EIF3H_TAEGU Eukaryotic translation initiation factor 3 subunit H OS=Taeniopygia guttata GN=EIF3H PE=2 SV=1 7 351 4.0E-48
sp|Q5ZLE6|EIF3H_CHICK Eukaryotic translation initiation factor 3 subunit H OS=Gallus gallus GN=EIF3H PE=2 SV=1 4 351 9.0E-48
sp|B4I1C2|EIF3H_DROSE Eukaryotic translation initiation factor 3 subunit H OS=Drosophila sechellia GN=eIF-3p40 PE=3 SV=1 7 351 1.0E-45
sp|B3N4F1|EIF3H_DROER Eukaryotic translation initiation factor 3 subunit H OS=Drosophila erecta GN=eIF-3p40 PE=3 SV=1 7 351 3.0E-45
sp|Q7PVR3|EIF3H_ANOGA Eukaryotic translation initiation factor 3 subunit H OS=Anopheles gambiae GN=AGAP009204 PE=3 SV=3 5 351 7.0E-45
sp|Q9U9Q4|EIF3H_DROME Eukaryotic translation initiation factor 3 subunit H OS=Drosophila melanogaster GN=eIF-3p40 PE=2 SV=2 7 351 7.0E-45
sp|B4JAS7|EIF3H_DROGR Eukaryotic translation initiation factor 3 subunit H OS=Drosophila grimshawi GN=eIF-3p40 PE=3 SV=1 13 351 2.0E-44
sp|B3MP94|EIF3H_DROAN Eukaryotic translation initiation factor 3 subunit H OS=Drosophila ananassae GN=eIF-3p40 PE=3 SV=1 7 351 2.0E-44
sp|B4LTW0|EIF3H_DROVI Eukaryotic translation initiation factor 3 subunit H OS=Drosophila virilis GN=eIF-3p40 PE=3 SV=1 7 351 2.0E-44
sp|B4KGS4|EIF3H_DROMO Eukaryotic translation initiation factor 3 subunit H OS=Drosophila mojavensis GN=eIF-3p40 PE=3 SV=1 13 351 8.0E-44
sp|B4P3T9|EIF3H_DROYA Eukaryotic translation initiation factor 3 subunit H OS=Drosophila yakuba GN=eIF-3p40 PE=3 SV=1 7 351 1.0E-43
sp|B5DJJ2|EIF3H_DROPS Eukaryotic translation initiation factor 3 subunit H OS=Drosophila pseudoobscura pseudoobscura GN=eIF-3p40 PE=3 SV=1 7 351 2.0E-43
sp|B4N116|EIF3H_DROWI Eukaryotic translation initiation factor 3 subunit H OS=Drosophila willistoni GN=eIF-3p40 PE=3 SV=1 13 351 1.0E-42
sp|A9V3P1|EIF3H_MONBE Eukaryotic translation initiation factor 3 subunit H OS=Monosiga brevicollis GN=9558 PE=3 SV=1 13 354 1.0E-36
sp|A8QCY3|EIF3H_BRUMA Eukaryotic translation initiation factor 3 subunit H OS=Brugia malayi GN=Bm1_50170 PE=3 SV=1 13 329 3.0E-22
sp|O01974|EIF3H_CAEEL Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis elegans GN=eif-3.H PE=3 SV=2 13 351 6.0E-20
sp|A8WVY9|EIF3H_CAEBR Eukaryotic translation initiation factor 3 subunit H OS=Caenorhabditis briggsae GN=eif-3.H PE=3 SV=3 13 349 1.0E-19
sp|Q750E9|RPN11_ASHGO 26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPN11 PE=3 SV=1 2 159 4.0E-08
sp|P43588|RPN11_YEAST Ubiquitin carboxyl-terminal hydrolase RPN11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN11 PE=1 SV=1 2 174 8.0E-07
sp|Q6FKS1|RPN11_CANGA 26S proteasome regulatory subunit RPN11 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPN11 PE=3 SV=1 2 174 8.0E-07
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GO

GO Term Description Terminal node
GO:0140492 metal-dependent deubiquitinase activity Yes
GO:0005515 protein binding Yes
GO:0070122 obsolete isopeptidase activity Yes
GO:0016787 hydrolase activity No
GO:0005488 binding No
GO:0101005 deubiquitinase activity No
GO:0140096 catalytic activity, acting on a protein No
GO:0003824 catalytic activity No
GO:0019783 ubiquitin-like protein peptidase activity No
GO:0008233 peptidase activity No
GO:0003674 molecular_function No
GO:0008237 metallopeptidase activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 273.38 138.22 408.55
CcL In ants, during behavior modification 437.47 191.20 683.74
CcD In ants, recently dead 347.19 168.38 525.99

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.076867 no
SC16a CcD 0.362125 no
CcL CcD 0.418050 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6401
MSETPKDGPFHAVQVEALVVIKIAKHCSSTFPTTATGMTVGMDQNGLFEVTNSFPFPSVEGAAVDSHQNDASLLA
AAAPRQKANMLYQAEIIRHLKEVNVDANNIGWYTSATMGNFINLAFIENQYHYQKDNDRTVALVYDASKSSQGNL
TLRAFRLTAVFMNAYKEAKFTTENLQKSKLTFRDIIVELPITIHNSHLLTSFLHQIVTPPSPDEIEPPSSLADIE
RNPVKAPLYPSIDSLDVSIDPFLEKTCDFLLESIESHYTDLNNFQFYQRQLGREQAKITQWQIKRKAENAQRAVA
KQPPLPEDEWQRLYKLPQEPSRLEGMLNAKQVEQYSKQVDGFTATVTAKMFAVREDLLPQ
Coding >Ophio5|6401
ATGAGCGAAACGCCCAAGGATGGGCCGTTCCACGCGGTTCAGGTTGAGGCCCTGGTGGTCATCAAGATCGCCAAG
CACTGCTCCTCGACCTTTCCGACGACAGCGACGGGCATGACGGTCGGCATGGATCAGAACGGGCTCTTTGAGGTC
ACGAACTCGTTTCCATTTCCCTCCGTCGAGGGCGCCGCCGTCGACAGCCACCAAAACGATGCGTCGTTGCTTGCC
GCCGCCGCGCCGCGACAAAAGGCCAACATGTTGTATCAGGCCGAGATTATCCGCCACCTTAAGGAGGTCAACGTC
GACGCCAACAACATCGGCTGGTACACGAGCGCGACAATGGGTAACTTTATCAACTTGGCTTTCATCGAGAATCAG
TATCACTACCAGAAGGACAATGACCGCACTGTCGCCCTCGTCTACGACGCCAGCAAGAGCTCGCAAGGGAACCTG
ACACTCCGCGCTTTTCGCCTGACGGCCGTCTTCATGAACGCCTACAAGGAGGCCAAGTTCACGACGGAGAATTTG
CAAAAGTCGAAGCTGACCTTCCGCGACATCATCGTCGAGCTTCCCATCACCATCCACAATTCGCACCTTCTCACC
TCTTTCCTCCACCAAATTGTCACCCCTCCTTCACCGGACGAGATTGAACCGCCCAGCTCGCTCGCCGACATCGAG
CGCAACCCCGTCAAGGCGCCTCTGTATCCGTCCATCGACAGCCTCGACGTTTCCATCGACCCCTTCCTCGAGAAG
ACGTGCGACTTTTTGCTCGAGAGCATCGAGTCTCACTACACAGACCTCAACAACTTCCAATTCTACCAGCGACAG
CTCGGGAGGGAGCAGGCCAAGATCACCCAGTGGCAGATCAAGCGCAAGGCGGAGAATGCCCAGCGGGCGGTGGCC
AAGCAGCCACCGCTGCCCGAGGACGAGTGGCAGCGGCTCTACAAGCTACCGCAGGAGCCCAGTCGGTTGGAGGGA
ATGCTGAATGCGAAGCAGGTGGAGCAGTATAGCAAGCAGGTCGACGGCTTCACTGCCACCGTCACGGCAAAGATG
TTTGCTGTGAGGGAGGATCTGCTACCGCAG
Transcript >Ophio5|6401
ATGAGCGAAACGCCCAAGGATGGGCCGTTCCACGCGGTTCAGGTTGAGGCCCTGGTGGTCATCAAGATCGCCAAG
CACTGCTCCTCGACCTTTCCGACGACAGCGACGGGCATGACGGTCGGCATGGATCAGAACGGGCTCTTTGAGGTC
ACGAACTCGTTTCCATTTCCCTCCGTCGAGGGCGCCGCCGTCGACAGCCACCAAAACGATGCGTCGTTGCTTGCC
GCCGCCGCGCCGCGACAAAAGGCCAACATGTTGTATCAGGCCGAGATTATCCGCCACCTTAAGGAGGTCAACGTC
GACGCCAACAACATCGGCTGGTACACGAGCGCGACAATGGGTAACTTTATCAACTTGGCTTTCATCGAGAATCAG
TATCACTACCAGAAGGACAATGACCGCACTGTCGCCCTCGTCTACGACGCCAGCAAGAGCTCGCAAGGGAACCTG
ACACTCCGCGCTTTTCGCCTGACGGCCGTCTTCATGAACGCCTACAAGGAGGCCAAGTTCACGACGGAGAATTTG
CAAAAGTCGAAGCTGACCTTCCGCGACATCATCGTCGAGCTTCCCATCACCATCCACAATTCGCACCTTCTCACC
TCTTTCCTCCACCAAATTGTCACCCCTCCTTCACCGGACGAGATTGAACCGCCCAGCTCGCTCGCCGACATCGAG
CGCAACCCCGTCAAGGCGCCTCTGTATCCGTCCATCGACAGCCTCGACGTTTCCATCGACCCCTTCCTCGAGAAG
ACGTGCGACTTTTTGCTCGAGAGCATCGAGTCTCACTACACAGACCTCAACAACTTCCAATTCTACCAGCGACAG
CTCGGGAGGGAGCAGGCCAAGATCACCCAGTGGCAGATCAAGCGCAAGGCGGAGAATGCCCAGCGGGCGGTGGCC
AAGCAGCCACCGCTGCCCGAGGACGAGTGGCAGCGGCTCTACAAGCTACCGCAGGAGCCCAGTCGGTTGGAGGGA
ATGCTGAATGCGAAGCAGGTGGAGCAGTATAGCAAGCAGGTCGACGGCTTCACTGCCACCGTCACGGCAAAGATG
TTTGCTGTGAGGGAGGATCTGCTACCGCAGTAG
Gene >Ophio5|6401
ATGAGCGAAACGCCCAAGGATGGGCCGTTCCACGCGGTTCAGGTTGAGGCCCTGGTGAGCTCGCTAACCTTTGCT
CCTCTCGTCTACAGCTGCTCACCCAGATTCGCAGGTGGTCATCAAGATCGCCAAGCACTGCTCCTCGACCTTTCC
GACGACAGCGACGGGCATGACGGTCGGCATGGATCAGAACGGGCTCTTTGAGGTCACGAACTCGTTTCCATTTCC
CTCCGTCGAGGGCGCCGCCGTCGACAGCCACCAAAACGATGCGTCGTTGCTTGCCGCCGCCGCGCCGCGACAAAA
GGCCAACATGTTGTATCAGGCCGAGATTATCCGCCACCTTAAGGAGGTCAACGTCGACGCCAACAACATCGGCTG
GTACACGAGCGCGACAATGGGTAACTTTATCAACTTGGCTTTCATCGAGAATCAGTATCACTACCAGAAGGACAA
TGACCGCACTGTCGCCCTCGTCTACGACGCCAGCAAGAGCTCGCAAGGGAACCTGACACTCCGCGCTTTTCGCCT
GACGGCCGTCTTCATGAACGCCTACAAGGAGGCCAAGTTCACGACGGAGAAGTGGGTTCGCCCCGTGGTCATGCA
CGGCCTTAGCTGACGACGATGCAGTTTGCAAAAGTCGAAGCTGACCTTCCGCGACATCATCGTCGAGCTTCCCAT
CACCATCCACAATTCGCACCTTCTCACCTCTTTCCTCCACCAAATTGTCACCCCTCCTTCACCGGACGAGATTGA
ACCGCCCAGCTCGCTCGCCGACATCGAGCGCAACCCCGTCAAGGCGCCTCTGTATCCGTCCATCGACAGCCTCGA
CGTTTCCATCGACCCCTTCCTCGAGAAGACGTGCGACTTTTTGCTCGAGAGCATCGAGTCTCACTACACAGACCT
CAACAACTTCCAATTCTACCAGCGACAGCTCGGGAGGGAGCAGGCCAAGATCACCCAGTGGCAGATCAAGCGCAA
GGCGGAGAATGCCCAGCGGGCGGTGGCCAAGCAGCCACCGCTGCCCGAGGACGAGTGGCAGCGGCTCTACAAGCT
ACCGCAGGAGCCCAGTCGGTTGGAGGGAATGCTGAATGCGAAGCAGGTGGAGCAGTATAGCAAGCAGGTCGACGG
CTTCACTGCCACCGTCACGGCAAAGATGTTTGCTGTGAGGGAGGATCTGCTACCGCAGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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