© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|6388 |
| Gene name | |
| Location | scaffold_558:3178..6185 |
| Strand | - |
| Gene length (bp) | 3007 |
| Transcript length (bp) | 2628 |
| Coding sequence length (bp) | 2625 |
| Protein length (aa) | 875 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00654 | Voltage_CLC | Voltage gated chloride channel | 4.5E-80 | 309 | 686 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9R279|CLCN3_CAVPO | H(+)/Cl(-) exchange transporter 3 OS=Cavia porcellus GN=CLCN3 PE=2 SV=1 | 121 | 869 | 7.0E-137 |
| sp|P51792|CLCN3_RAT | H(+)/Cl(-) exchange transporter 3 OS=Rattus norvegicus GN=Clcn3 PE=2 SV=2 | 121 | 869 | 1.0E-136 |
| sp|P51791|CLCN3_MOUSE | H(+)/Cl(-) exchange transporter 3 OS=Mus musculus GN=Clcn3 PE=1 SV=2 | 121 | 869 | 1.0E-136 |
| sp|O18894|CLCN3_RABIT | H(+)/Cl(-) exchange transporter 3 OS=Oryctolagus cuniculus GN=CLCN3 PE=2 SV=3 | 121 | 869 | 2.0E-136 |
| sp|P51790|CLCN3_HUMAN | H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens GN=CLCN3 PE=1 SV=2 | 121 | 869 | 2.0E-136 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9R279|CLCN3_CAVPO | H(+)/Cl(-) exchange transporter 3 OS=Cavia porcellus GN=CLCN3 PE=2 SV=1 | 121 | 869 | 7.0E-137 |
| sp|P51792|CLCN3_RAT | H(+)/Cl(-) exchange transporter 3 OS=Rattus norvegicus GN=Clcn3 PE=2 SV=2 | 121 | 869 | 1.0E-136 |
| sp|P51791|CLCN3_MOUSE | H(+)/Cl(-) exchange transporter 3 OS=Mus musculus GN=Clcn3 PE=1 SV=2 | 121 | 869 | 1.0E-136 |
| sp|O18894|CLCN3_RABIT | H(+)/Cl(-) exchange transporter 3 OS=Oryctolagus cuniculus GN=CLCN3 PE=2 SV=3 | 121 | 869 | 2.0E-136 |
| sp|P51790|CLCN3_HUMAN | H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens GN=CLCN3 PE=1 SV=2 | 121 | 869 | 2.0E-136 |
| sp|Q9TTU3|CLCN5_RABIT | H(+)/Cl(-) exchange transporter 5 OS=Oryctolagus cuniculus GN=CLCN5 PE=2 SV=1 | 121 | 870 | 3.0E-128 |
| sp|Q99P66|CLCN5_CAVPO | H(+)/Cl(-) exchange transporter 5 OS=Cavia porcellus GN=CLCN5 PE=2 SV=1 | 121 | 870 | 2.0E-127 |
| sp|Q5RDJ7|CLCN3_PONAB | H(+)/Cl(-) exchange transporter 3 OS=Pongo abelii GN=CLCN3 PE=2 SV=1 | 121 | 869 | 3.0E-127 |
| sp|Q5RBK4|CLCN5_PONAB | H(+)/Cl(-) exchange transporter 5 OS=Pongo abelii GN=CLCN5 PE=2 SV=1 | 121 | 870 | 2.0E-125 |
| sp|P51795|CLCN5_HUMAN | H(+)/Cl(-) exchange transporter 5 OS=Homo sapiens GN=CLCN5 PE=1 SV=1 | 121 | 870 | 2.0E-125 |
| sp|P51793|CLCN4_HUMAN | H(+)/Cl(-) exchange transporter 4 OS=Homo sapiens GN=CLCN4 PE=1 SV=2 | 104 | 870 | 2.0E-125 |
| sp|Q9GKE7|CLCN5_PIG | H(+)/Cl(-) exchange transporter 5 OS=Sus scrofa GN=CLCN5 PE=2 SV=1 | 121 | 870 | 4.0E-125 |
| sp|P51796|CLCN5_RAT | H(+)/Cl(-) exchange transporter 5 OS=Rattus norvegicus GN=Clcn5 PE=2 SV=1 | 121 | 870 | 9.0E-125 |
| sp|Q9WVD4|CLCN5_MOUSE | H(+)/Cl(-) exchange transporter 5 OS=Mus musculus GN=Clcn5 PE=1 SV=1 | 121 | 870 | 3.0E-124 |
| sp|P51794|CLCN4_RAT | H(+)/Cl(-) exchange transporter 4 OS=Rattus norvegicus GN=Clcn4 PE=2 SV=1 | 121 | 870 | 4.0E-123 |
| sp|Q61418|CLCN4_MOUSE | H(+)/Cl(-) exchange transporter 4 OS=Mus musculus GN=Clcn4 PE=2 SV=2 | 121 | 870 | 2.0E-122 |
| sp|P0C197|CLCNX_USTMA | Probable chloride channel protein UM03490-D OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_11084 PE=3 SV=1 | 310 | 807 | 2.0E-90 |
| sp|O60159|YHYB_SCHPO | Putative anion/proton exchange transporter C19C7.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC19C7.11 PE=3 SV=2 | 310 | 875 | 1.0E-68 |
| sp|P37020|GEF1_YEAST | Anion/proton exchange transporter GEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GEF1 PE=1 SV=2 | 115 | 868 | 4.0E-68 |
| sp|Q54AX6|CLCA_DICDI | Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2 SV=1 | 310 | 797 | 2.0E-47 |
| sp|O94287|YOO2_SCHPO | Uncharacterized chloride channel protein C887.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.02 PE=3 SV=2 | 309 | 869 | 3.0E-47 |
| sp|Q75JF3|CLCC_DICDI | Chloride channel protein C OS=Dictyostelium discoideum GN=clcC PE=3 SV=1 | 310 | 709 | 2.0E-46 |
| sp|P35525|CLCN2_RAT | Chloride channel protein 2 OS=Rattus norvegicus GN=Clcn2 PE=1 SV=1 | 300 | 789 | 3.0E-45 |
| sp|P51788|CLCN2_HUMAN | Chloride channel protein 2 OS=Homo sapiens GN=CLCN2 PE=1 SV=2 | 300 | 789 | 1.0E-44 |
| sp|Q9R0A1|CLCN2_MOUSE | Chloride channel protein 2 OS=Mus musculus GN=Clcn2 PE=1 SV=2 | 300 | 789 | 2.0E-44 |
| sp|Q86AZ6|CLCB_DICDI | Chloride channel protein B OS=Dictyostelium discoideum GN=clcB PE=3 SV=1 | 310 | 709 | 6.0E-44 |
| sp|P51789|CLCN2_RABIT | Chloride channel protein 2 OS=Oryctolagus cuniculus GN=CLCN2 PE=2 SV=1 | 300 | 789 | 7.0E-44 |
| sp|Q54C67|CLCF_DICDI | Chloride channel protein F OS=Dictyostelium discoideum GN=clcF PE=3 SV=1 | 309 | 779 | 9.0E-44 |
| sp|Q9WU45|CLCN2_CAVPO | Chloride channel protein 2 OS=Cavia porcellus GN=CLCN2 PE=2 SV=1 | 300 | 724 | 2.0E-43 |
| sp|Q9BMK9|CLH3_CAEEL | Chloride channel protein clh-3 OS=Caenorhabditis elegans GN=clh-3 PE=1 SV=1 | 309 | 706 | 4.0E-42 |
| sp|Q64347|CLCN1_MOUSE | Chloride channel protein 1 OS=Mus musculus GN=Clcn1 PE=1 SV=3 | 309 | 803 | 1.0E-41 |
| sp|P35524|CLCN1_RAT | Chloride channel protein 1 OS=Rattus norvegicus GN=Clcn1 PE=1 SV=1 | 309 | 803 | 1.0E-41 |
| sp|P35523|CLCN1_HUMAN | Chloride channel protein 1 OS=Homo sapiens GN=CLCN1 PE=1 SV=3 | 305 | 784 | 2.0E-40 |
| sp|Q9VGH7|CLCN2_DROME | Chloride channel protein 2 OS=Drosophila melanogaster GN=ClC-a PE=2 SV=3 | 300 | 706 | 2.0E-40 |
| sp|Q9MZT1|CLCN1_CANLF | Chloride channel protein 1 OS=Canis lupus familiaris GN=CLCN1 PE=1 SV=1 | 309 | 784 | 5.0E-39 |
| sp|P92942|CLCB_ARATH | Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1 | 309 | 712 | 5.0E-39 |
| sp|P92941|CLCA_ARATH | Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2 | 305 | 858 | 7.0E-38 |
| sp|P35522|CICH_TORCA | Chloride channel protein OS=Torpedo californica PE=1 SV=3 | 309 | 706 | 3.0E-37 |
| sp|P21564|CICH_TORMA | Chloride channel protein OS=Torpedo marmorata PE=1 SV=1 | 309 | 706 | 5.0E-37 |
| sp|O70496|CLCN7_MOUSE | H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1 | 310 | 866 | 2.0E-36 |
| sp|P51799|CLCN7_RAT | H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1 | 310 | 866 | 2.0E-36 |
| sp|P92943|CLCD_ARATH | Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2 | 309 | 875 | 2.0E-36 |
| sp|Q96282|CLCC_ARATH | Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1 | 309 | 764 | 2.0E-36 |
| sp|Q9TT16|CLCN6_RABIT | Chloride transport protein 6 OS=Oryctolagus cuniculus GN=CLCN6 PE=2 SV=1 | 310 | 707 | 9.0E-34 |
| sp|Q9W701|CLCKB_XENLA | Chloride channel protein ClC-Kb OS=Xenopus laevis GN=clcnkb PE=1 SV=1 | 310 | 870 | 4.0E-33 |
| sp|Q4PKH3|CLCN7_BOVIN | H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1 | 310 | 866 | 7.0E-33 |
| sp|O35454|CLCN6_MOUSE | Chloride transport protein 6 OS=Mus musculus GN=Clcn6 PE=1 SV=1 | 310 | 707 | 7.0E-33 |
| sp|P51797|CLCN6_HUMAN | Chloride transport protein 6 OS=Homo sapiens GN=CLCN6 PE=1 SV=2 | 310 | 707 | 2.0E-32 |
| sp|P51798|CLCN7_HUMAN | H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2 | 310 | 872 | 2.0E-31 |
| sp|P60300|CLCG_ARATH | Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=CBSCLC6 PE=3 SV=2 | 309 | 849 | 3.0E-28 |
| sp|Q54LQ4|CLCE_DICDI | Chloride channel protein E OS=Dictyostelium discoideum GN=clcE PE=3 SV=1 | 310 | 710 | 7.0E-28 |
| sp|P51803|CLCKA_RABIT | Chloride channel protein ClC-Ka OS=Oryctolagus cuniculus GN=CLCNKA PE=2 SV=1 | 310 | 856 | 2.0E-26 |
| sp|P51804|CLCKB_RABIT | Chloride channel protein ClC-Kb OS=Oryctolagus cuniculus GN=CLCNKB PE=2 SV=1 | 310 | 853 | 4.0E-26 |
| sp|Q1ZXJ0|CLCD_DICDI | Chloride channel protein D OS=Dictyostelium discoideum GN=clcD PE=3 SV=1 | 526 | 865 | 1.0E-21 |
| sp|Q1ZXJ0|CLCD_DICDI | Chloride channel protein D OS=Dictyostelium discoideum GN=clcD PE=3 SV=1 | 306 | 519 | 7.0E-21 |
| sp|Q9WUB6|CLCKB_MOUSE | Chloride channel protein ClC-Kb OS=Mus musculus GN=Clcnkb PE=1 SV=2 | 309 | 754 | 7.0E-19 |
| sp|Q9WUB7|CLCKA_MOUSE | Chloride channel protein ClC-Ka OS=Mus musculus GN=Clcnka PE=1 SV=2 | 310 | 754 | 8.0E-19 |
| sp|Q06393|CLCKA_RAT | Chloride channel protein ClC-Ka OS=Rattus norvegicus GN=Clcnka PE=1 SV=3 | 310 | 856 | 2.0E-18 |
| sp|P51802|CLCKB_RAT | Chloride channel protein ClC-Kb OS=Rattus norvegicus GN=Clcnkb PE=1 SV=1 | 309 | 754 | 1.0E-17 |
| sp|P51800|CLCKA_HUMAN | Chloride channel protein ClC-Ka OS=Homo sapiens GN=CLCNKA PE=1 SV=1 | 309 | 754 | 2.0E-17 |
| sp|P51801|CLCKB_HUMAN | Chloride channel protein ClC-Kb OS=Homo sapiens GN=CLCNKB PE=1 SV=3 | 309 | 856 | 2.0E-17 |
| sp|B5Y1L4|CLCA_KLEP3 | H(+)/Cl(-) exchange transporter ClcA OS=Klebsiella pneumoniae (strain 342) GN=clcA PE=3 SV=1 | 310 | 695 | 5.0E-12 |
| sp|A7MGR4|CLCA_CROS8 | H(+)/Cl(-) exchange transporter ClcA OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=clcA PE=3 SV=1 | 309 | 695 | 5.0E-12 |
| sp|A8ALD3|CLCA_CITK8 | H(+)/Cl(-) exchange transporter ClcA OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-12 |
| sp|Q8ZRP8|CLCA_SALTY | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=clcA PE=1 SV=1 | 310 | 695 | 4.0E-11 |
| sp|A9N0Q1|CLCA_SALPB | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=clcA PE=3 SV=1 | 310 | 695 | 5.0E-11 |
| sp|B4SUY5|CLCA_SALNS | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella newport (strain SL254) GN=clcA PE=3 SV=1 | 310 | 695 | 5.0E-11 |
| sp|B5R3G7|CLCA_SALEP | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella enteritidis PT4 (strain P125109) GN=clcA PE=3 SV=1 | 310 | 695 | 5.0E-11 |
| sp|Q8Z9B3|CLCA_SALTI | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella typhi GN=clcA PE=3 SV=1 | 310 | 695 | 6.0E-11 |
| sp|B4TXQ7|CLCA_SALSV | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella schwarzengrund (strain CVM19633) GN=clcA PE=3 SV=1 | 310 | 695 | 6.0E-11 |
| sp|C0Q5R6|CLCA_SALPC | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella paratyphi C (strain RKS4594) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-11 |
| sp|Q57T52|CLCA_SALCH | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella choleraesuis (strain SC-B67) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-11 |
| sp|B4TK31|CLCA_SALHS | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella heidelberg (strain SL476) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-11 |
| sp|B5FJ02|CLCA_SALDC | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella dublin (strain CT_02021853) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-11 |
| sp|B5F8R6|CLCA_SALA4 | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella agona (strain SL483) GN=clcA PE=3 SV=1 | 310 | 695 | 7.0E-11 |
| sp|B5RHE1|CLCA_SALG2 | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=clcA PE=3 SV=1 | 310 | 695 | 8.0E-11 |
| sp|Q8XTT4|CLCL_RALSO | Putative chloride channel protein ClcB-like OS=Ralstonia solanacearum (strain GMI1000) GN=RSp0020 PE=3 SV=2 | 329 | 694 | 1.0E-10 |
| sp|A9MPK6|CLCA_SALAR | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=clcA PE=3 SV=1 | 310 | 695 | 2.0E-10 |
| sp|B5BL83|CLCA_SALPK | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella paratyphi A (strain AKU_12601) GN=clcA PE=3 SV=1 | 310 | 695 | 2.0E-10 |
| sp|Q5PD50|CLCA_SALPA | H(+)/Cl(-) exchange transporter ClcA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=clcA PE=3 SV=1 | 310 | 695 | 2.0E-10 |
| sp|Q8ZEB3|CLCB_YERPE | Voltage-gated ClC-type chloride channel ClcB OS=Yersinia pestis GN=clcB PE=3 SV=2 | 337 | 694 | 2.0E-09 |
| sp|A6T4V9|CLCA_KLEP7 | H(+)/Cl(-) exchange transporter ClcA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=clcA PE=3 SV=1 | 310 | 695 | 2.0E-09 |
| sp|Q9AGD5|CLCB_YERPS | Voltage-gated ClC-type chloride channel ClcB OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=clcB PE=3 SV=3 | 337 | 694 | 5.0E-09 |
| sp|A7FHW4|CLCB_YERP3 | Voltage-gated ClC-type chloride channel ClcB OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clcB PE=3 SV=1 | 337 | 694 | 5.0E-09 |
| sp|A7FM08|CLCA_YERP3 | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|B2K549|CLCA_YERPB | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|B1JK21|CLCA_YERPY | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|A4TPW7|CLCA_YERPP | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pestis (strain Pestoides F) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|Q1CLU6|CLCA_YERPN | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|A9R1E4|CLCA_YERPG | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pestis bv. Antiqua (strain Angola) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|Q8ZBM0|CLCA_YERPE | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pestis GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|Q1C3X2|CLCA_YERPA | H(+)/Cl(-) exchange transporter ClcA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=clcA PE=3 SV=1 | 334 | 481 | 2.0E-06 |
| sp|Q87WD2|ERIC_PSESM | Chloride/fluoride channel protein OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=eriC PE=1 SV=1 | 340 | 511 | 9.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0016020 | membrane | Yes |
| GO:0005247 | voltage-gated chloride channel activity | Yes |
| GO:0006821 | chloride transport | Yes |
| GO:0051234 | establishment of localization | No |
| GO:0008150 | biological_process | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| GO:0005244 | voltage-gated ion channel activity | No |
| GO:0006810 | transport | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0005254 | chloride channel activity | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0005216 | ion channel activity | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0022832 | voltage-gated channel activity | No |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0015267 | channel activity | No |
| GO:0006820 | anion transport | No |
| GO:0009987 | cellular process | No |
| GO:0015108 | chloride transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015698 | inorganic anion transport | No |
| GO:0006811 | ion transport | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0022836 | gated channel activity | No |
| GO:0005253 | anion channel activity | No |
| GO:0008308 | voltage-gated anion channel activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 154 | 176 | 22 |
| 2 | 234 | 254 | 20 |
| 3 | 325 | 347 | 22 |
| 4 | 357 | 374 | 17 |
| 5 | 387 | 409 | 22 |
| 6 | 424 | 441 | 17 |
| 7 | 461 | 480 | 19 |
| 8 | 500 | 522 | 22 |
| 9 | 569 | 591 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|6388 MADREPPDGYSPPSSPLMMRQPPSNRRRHSSDEPNERSALLAPPPPMTTTTRPRVRIRSGADSPRLPSLSRTQSY AGSYLGARHHNRHESLSQRLISAFADGRGSFSGSKSSMFIDERVWYDQFTSTDWVHDAIADSHRVKALRSRKGFW GRIAILFDGVQGWILSALSGFIIALIAYTVDVSEATVFDYKDGYCAKAWYLGEQKCCPRGPCDDWKNWSEVITFS PLGPGWTEFTIYMSGVVGFAVFSCWLALWTETVVPSAYRLTTLDENLAAVSPPQVLEDGQTDDSASPRRRGEAEA GNPPMVYYSAAGSGVAEVRVILSGFVLHGFLGFKTLVIKMLSLVFSVSSGLSLGKEGPFVHMATCVGNIACRLFP KYDQNDAKRREALSAAAAAGVAVAFGAPLGGVLFGLEEVAYFFPAKTLFRTFFCCIVAALSLKFLNPYGTHKIVM FEVRYLVDWEFFELLGFIFVGVLGGAIGALFIKAHKHWAHSFRRIRVIKAYPMFEVFLVAVITGLMSYWNVLTKL PVAKLLFNLASPCDYSADGYEDELGLCSNSVEDIPRIIRNLLIAFIVKGFLTVITFGIKVPSGIYIPSMVVGGLM GRIVGHLVQWMVLSAPHWRIFHGCATAVEGSCIQPGVYGLIAAGATMCGTTRLSVTLAVILFELTGSLDYVLPFS LSVLVSKWTADAIEPHSIYDLLTSMNSYPFLDNKRKPIFTSDLEDIVPRLRRERVIDITDSPLVSASSLRTKLEV LHRSAELDGGLPIVRRGVLVGLIPAPDLEYALDQLEDEETSMCLMDRVPSIDDDDVCDADPTDFARYIDPAPVAL DIRSPMDLVYECFVKLGLRYICVLKDGKYAGMTHKKTFVKYMRQLEEAGD |
| Coding | >Ophio5|6388 ATGGCTGACCGGGAGCCGCCCGACGGTTACTCTCCGCCATCATCTCCTCTAATGATGCGCCAACCTCCCTCCAAC CGCCGTCGCCATTCGAGCGACGAGCCCAACGAGCGTTCTGCACTCCTGGCGCCACCCCCGCCGATGACGACGACG ACGAGGCCCCGAGTCCGCATCCGCAGCGGCGCCGACTCTCCCCGTCTGCCTTCTCTTTCTCGAACCCAAAGCTAT GCGGGGAGCTACCTCGGCGCGCGACACCATAATCGACACGAGTCACTGAGCCAGAGGCTAATTTCAGCCTTTGCC GACGGGCGTGGATCCTTTTCGGGATCCAAGAGCTCCATGTTCATCGACGAACGAGTTTGGTACGATCAGTTTACC AGCACCGACTGGGTACACGATGCCATTGCCGATTCCCATCGCGTCAAGGCTCTCCGCAGCAGAAAAGGCTTCTGG GGCCGTATCGCCATACTGTTTGACGGCGTCCAGGGATGGATTCTCAGCGCCCTCTCGGGATTCATCATTGCCCTC ATTGCCTACACCGTCGACGTGAGCGAAGCCACCGTTTTCGATTACAAGGACGGCTACTGTGCCAAGGCGTGGTAC CTCGGTGAGCAGAAATGCTGCCCCCGTGGCCCTTGCGACGATTGGAAGAACTGGTCCGAGGTCATTACCTTTAGC CCCCTCGGGCCGGGATGGACCGAATTCACCATCTACATGTCGGGTGTCGTCGGCTTCGCCGTCTTTTCCTGCTGG CTGGCCTTGTGGACCGAGACGGTAGTGCCATCGGCGTACCGTCTGACGACACTGGACGAGAACCTCGCGGCCGTG AGCCCGCCTCAGGTACTGGAAGACGGCCAGACGGACGATTCGGCGAGCCCCCGCCGCCGTGGCGAGGCCGAGGCC GGTAACCCACCCATGGTCTACTACTCGGCAGCGGGCAGCGGCGTGGCGGAGGTGCGCGTCATTCTCAGCGGTTTC GTGTTGCACGGATTCCTCGGCTTCAAGACACTGGTCATCAAGATGCTGTCGCTCGTCTTCAGCGTCTCGTCCGGC CTCAGTCTGGGAAAGGAGGGGCCCTTTGTCCACATGGCGACGTGTGTCGGCAATATCGCCTGCCGCTTGTTTCCC AAGTACGACCAGAACGACGCCAAGCGGCGAGAGGCCCTTTCGGCAGCGGCAGCGGCGGGCGTCGCCGTCGCTTTC GGCGCGCCGCTCGGAGGCGTCTTGTTCGGCCTCGAGGAGGTGGCCTACTTCTTTCCGGCGAAGACGCTGTTCAGG ACCTTTTTCTGTTGCATCGTCGCCGCGCTGTCTCTCAAGTTCCTCAACCCCTACGGCACCCACAAGATCGTCATG TTCGAGGTGCGCTACCTCGTGGACTGGGAGTTTTTCGAGTTGCTCGGCTTCATCTTCGTCGGCGTCCTGGGCGGC GCCATCGGCGCGCTCTTCATCAAGGCGCACAAGCACTGGGCTCATAGCTTCCGCCGGATACGCGTCATCAAGGCC TACCCTATGTTCGAAGTCTTTCTCGTCGCCGTCATCACGGGCCTCATGAGCTACTGGAACGTGCTGACGAAGCTG CCCGTGGCCAAGCTGCTCTTCAACCTGGCGTCGCCCTGCGACTACTCGGCCGACGGTTACGAGGACGAGCTGGGC CTGTGTTCGAATTCGGTCGAGGACATACCGCGCATCATACGAAACCTCTTGATCGCCTTTATCGTCAAGGGGTTT CTCACTGTCATCACCTTCGGCATCAAAGTTCCATCGGGTATTTACATTCCGTCCATGGTGGTGGGCGGTCTGATG GGCCGCATCGTCGGCCACCTCGTGCAATGGATGGTTCTGTCGGCGCCGCACTGGCGCATCTTTCACGGCTGTGCC ACGGCCGTAGAGGGGAGTTGCATCCAGCCCGGCGTCTACGGCCTCATCGCCGCTGGAGCGACCATGTGCGGAACG ACGAGGCTGTCGGTGACGCTGGCCGTGATTCTGTTTGAGCTGACGGGCAGCCTGGACTACGTGCTCCCGTTTTCT CTATCCGTCTTGGTTTCCAAGTGGACGGCGGATGCCATTGAGCCGCACAGCATCTACGACCTCCTCACGAGCATG AATTCGTACCCCTTCCTCGACAATAAGCGCAAGCCCATCTTCACCAGCGACTTGGAGGACATTGTGCCGCGGCTG CGGCGGGAGCGGGTGATTGACATTACCGACTCGCCGCTCGTGTCGGCCTCGAGCCTCCGGACCAAGCTGGAGGTG CTGCACCGGTCGGCCGAGCTCGACGGCGGGCTGCCCATTGTGCGACGCGGGGTGCTGGTCGGGCTCATCCCGGCG CCAGACCTCGAGTACGCGCTGGATCAGCTGGAAGACGAGGAAACGAGCATGTGTCTCATGGATCGGGTACCGAGC ATCGATGATGACGACGTGTGCGATGCCGACCCGACGGACTTTGCCCGGTACATAGATCCGGCTCCGGTGGCGCTA GACATCAGGTCGCCCATGGACCTCGTGTACGAGTGTTTCGTCAAGCTGGGCCTGCGGTACATTTGCGTGCTGAAG GACGGCAAATACGCGGGCATGACACACAAGAAGACGTTTGTCAAGTACATGAGGCAACTCGAAGAGGCTGGGGAC |
| Transcript | >Ophio5|6388 ATGGCTGACCGGGAGCCGCCCGACGGTTACTCTCCGCCATCATCTCCTCTAATGATGCGCCAACCTCCCTCCAAC CGCCGTCGCCATTCGAGCGACGAGCCCAACGAGCGTTCTGCACTCCTGGCGCCACCCCCGCCGATGACGACGACG ACGAGGCCCCGAGTCCGCATCCGCAGCGGCGCCGACTCTCCCCGTCTGCCTTCTCTTTCTCGAACCCAAAGCTAT GCGGGGAGCTACCTCGGCGCGCGACACCATAATCGACACGAGTCACTGAGCCAGAGGCTAATTTCAGCCTTTGCC GACGGGCGTGGATCCTTTTCGGGATCCAAGAGCTCCATGTTCATCGACGAACGAGTTTGGTACGATCAGTTTACC AGCACCGACTGGGTACACGATGCCATTGCCGATTCCCATCGCGTCAAGGCTCTCCGCAGCAGAAAAGGCTTCTGG GGCCGTATCGCCATACTGTTTGACGGCGTCCAGGGATGGATTCTCAGCGCCCTCTCGGGATTCATCATTGCCCTC ATTGCCTACACCGTCGACGTGAGCGAAGCCACCGTTTTCGATTACAAGGACGGCTACTGTGCCAAGGCGTGGTAC CTCGGTGAGCAGAAATGCTGCCCCCGTGGCCCTTGCGACGATTGGAAGAACTGGTCCGAGGTCATTACCTTTAGC CCCCTCGGGCCGGGATGGACCGAATTCACCATCTACATGTCGGGTGTCGTCGGCTTCGCCGTCTTTTCCTGCTGG CTGGCCTTGTGGACCGAGACGGTAGTGCCATCGGCGTACCGTCTGACGACACTGGACGAGAACCTCGCGGCCGTG AGCCCGCCTCAGGTACTGGAAGACGGCCAGACGGACGATTCGGCGAGCCCCCGCCGCCGTGGCGAGGCCGAGGCC GGTAACCCACCCATGGTCTACTACTCGGCAGCGGGCAGCGGCGTGGCGGAGGTGCGCGTCATTCTCAGCGGTTTC GTGTTGCACGGATTCCTCGGCTTCAAGACACTGGTCATCAAGATGCTGTCGCTCGTCTTCAGCGTCTCGTCCGGC CTCAGTCTGGGAAAGGAGGGGCCCTTTGTCCACATGGCGACGTGTGTCGGCAATATCGCCTGCCGCTTGTTTCCC AAGTACGACCAGAACGACGCCAAGCGGCGAGAGGCCCTTTCGGCAGCGGCAGCGGCGGGCGTCGCCGTCGCTTTC GGCGCGCCGCTCGGAGGCGTCTTGTTCGGCCTCGAGGAGGTGGCCTACTTCTTTCCGGCGAAGACGCTGTTCAGG ACCTTTTTCTGTTGCATCGTCGCCGCGCTGTCTCTCAAGTTCCTCAACCCCTACGGCACCCACAAGATCGTCATG TTCGAGGTGCGCTACCTCGTGGACTGGGAGTTTTTCGAGTTGCTCGGCTTCATCTTCGTCGGCGTCCTGGGCGGC GCCATCGGCGCGCTCTTCATCAAGGCGCACAAGCACTGGGCTCATAGCTTCCGCCGGATACGCGTCATCAAGGCC TACCCTATGTTCGAAGTCTTTCTCGTCGCCGTCATCACGGGCCTCATGAGCTACTGGAACGTGCTGACGAAGCTG CCCGTGGCCAAGCTGCTCTTCAACCTGGCGTCGCCCTGCGACTACTCGGCCGACGGTTACGAGGACGAGCTGGGC CTGTGTTCGAATTCGGTCGAGGACATACCGCGCATCATACGAAACCTCTTGATCGCCTTTATCGTCAAGGGGTTT CTCACTGTCATCACCTTCGGCATCAAAGTTCCATCGGGTATTTACATTCCGTCCATGGTGGTGGGCGGTCTGATG GGCCGCATCGTCGGCCACCTCGTGCAATGGATGGTTCTGTCGGCGCCGCACTGGCGCATCTTTCACGGCTGTGCC ACGGCCGTAGAGGGGAGTTGCATCCAGCCCGGCGTCTACGGCCTCATCGCCGCTGGAGCGACCATGTGCGGAACG ACGAGGCTGTCGGTGACGCTGGCCGTGATTCTGTTTGAGCTGACGGGCAGCCTGGACTACGTGCTCCCGTTTTCT CTATCCGTCTTGGTTTCCAAGTGGACGGCGGATGCCATTGAGCCGCACAGCATCTACGACCTCCTCACGAGCATG AATTCGTACCCCTTCCTCGACAATAAGCGCAAGCCCATCTTCACCAGCGACTTGGAGGACATTGTGCCGCGGCTG CGGCGGGAGCGGGTGATTGACATTACCGACTCGCCGCTCGTGTCGGCCTCGAGCCTCCGGACCAAGCTGGAGGTG CTGCACCGGTCGGCCGAGCTCGACGGCGGGCTGCCCATTGTGCGACGCGGGGTGCTGGTCGGGCTCATCCCGGCG CCAGACCTCGAGTACGCGCTGGATCAGCTGGAAGACGAGGAAACGAGCATGTGTCTCATGGATCGGGTACCGAGC ATCGATGATGACGACGTGTGCGATGCCGACCCGACGGACTTTGCCCGGTACATAGATCCGGCTCCGGTGGCGCTA GACATCAGGTCGCCCATGGACCTCGTGTACGAGTGTTTCGTCAAGCTGGGCCTGCGGTACATTTGCGTGCTGAAG GACGGCAAATACGCGGGCATGACACACAAGAAGACGTTTGTCAAGTACATGAGGCAACTCGAAGAGGCTGGGGAC TAG |
| Gene | >Ophio5|6388 ATGGCTGACCGGGAGCCGCCCGACGGTTACTCTCCGCCATCATCTCCTCTAATGATGCGCCAACCTCCCTCCAAC CGCCGTCGCCATTCGAGCGACGAGCCCAACGAGCGTTCTGCACTCCTGGCGCCACCCCCGCCGATGACGACGACG ACGAGGCCCCGAGTCCGCATCCGCAGCGGCGCCGACTCTCCCCGTCTGCCTTCTCTTTCTCGAACCCAAAGCTAT GCGGGCAAGCCAGCCTCTTCCTCGACTTGTTCTCATCCAGCTGCTGACCCCGATCTGGCTCATAGGGAGCTACCT CGGCGCGCGACACCATAATCGACACGAGTCACTGAGCCAGAGGCTAATTTCAGCCTTTGCCGACGGGCGTGGATC CTTTTCGGGATCCAAGAGCTCCATGTTCATCGACGAACGAGTTTGGTACGATCAGTTTACCAGCACCGACTGGGT ACACGATGCCATTGCCGATTCCCATCGCGTCAAGGCTCTCCGCAGCAGAAAAGGCTTCTGGGGCCGTATCGCCAT ACTGTTTGACGGCGTCCAGGGATGGATTCTCAGCGCCCTCTCGGGATTCATCATTGCCCTCATTGCCTACACCGT CGACGTGAGCGAAGCCACCGTTTTCGATTACAAGGACGGCTACTGTGCCAAGGCGTGGTACCTCGGTGAGCAGGT GAGGCATCCACTCCCAGGGCGCTTGATGGAGGGAGCCTTGGCACCTGCTTACGCTTCACAGAAATGCTGCCCCCG TGGCCCTTGCGACGATTGGAAGAACTGGTCCGAGGTCATTACCTTTAGCCCCCTCGGGCCGGGATGGACCGAATT CACCATCTACATGTCGGGTGTCGTCGGCTTCGCCGTCTTTTCCTGCTGGCTGGCCTTGTGGACCGAGACGGTAGT GCCATCGGCGTACCGTCTGACGACACTGGACGAGAACCTCGCGGCCGTGAGCCCGCCTCAGGTACTGGAAGACGG CCAGACGGACGATTCGGCGAGCCCCCGCCGCCGTGGCGAGGCCGAGGCCGGTAACCCACCCATGGTCTACTACTC GGCAGCGGGCAGCGGCGTGGCGGAGGTGCGCGTCATTCTCAGCGGTTTCGTGTTGCACGGATTCCTCGGCTTCAA GACACTGGTCATCAAGATGCTGTCGCTCGTCTTCAGCGTCTCGTCCGGCCTCAGTCTGGGAAAGGAGGGGCCCTT TGTCCACATGGCGACGTGTGTCGGCAATATCGCCTGCCGCTTGTTTCCCAAGTACGACCAGAACGACGCCAAGCG GCGAGAGGCCCTTTCGGCAGCGGCAGCGGCGGGCGTCGCCGTCGCTTTCGGCGCGCCGCTCGGAGGCGTCTTGTT CGGCCTCGAGGAGGTGGCCTACTTCTTTCCGGCGAAGACGCTGTTCAGGACCTTTTTCTGTTGCATCGTCGCCGC GCTGTCTCTCAAGTTCCTCAACCCCTACGGCACCCACAAGATCGTCATGTTCGAGGTGCGCTACCTCGTGGACTG GGAGTTTTTCGAGTTGCTCGGCTTCATCTTCGTCGGCGTCCTGGGCGGCGCCATCGGCGCGCTCTTCATCAAGGC GCACAAGCACTGGGCTCATAGCTTCCGCCGGATACGCGTCATCAAGGCCTACCCTATGTTCGAAGTCTTTCTCGT CGCCGTCATCACGGGCCTCATGAGCTACTGGAACGTGCTGACGAAGCTGCCCGTGGCCAAGCTGCTCTTCAACCT GGCGTCGCCCTGCGACTACTCGGCCGACGGTTACGAGGACGAGCTGGGCCTGTGTTCGAATTCGGTCGAGGACAT ACCGCGCATCATACGAAACCTCTTGATCGCCTTTATCGTCAAGGGGTTTCTCACTGTCATCACCTTCGGCATCGT GAGTAAAGCAGACGGCTGAGATAGGGGGGGGTTGTGACTGACAGATCGGACAGAAAGTTCCATCGGGTATTTACA TTCCGTCCATGGTGGTGGGCGGTCTGATGGGCCGCATCGTCGGCCACCTCGTGCAATGGATGGTTCTGTCGGCGC CGCACTGGCGCATCTTTCACGGCTGTGCCACGGCCGTAGAGGGGAGTTGCATCCAGCCCGGCGTCTACGGCCTCA TCGCCGCTGGAGCGACCATGTGCGGAACGACGAGGCTGTCGGTGACGCTGGCCGTGATTCTGTTTGAGCTGACGG GCAGCCTGGACTACGTGCTCCCGTTTTCTCTATCCGTCTTGGTTTCCAAGTGGACGGCGGATGCCATTGAGCCGC ACAGCATCTACGTCAGCTCAGGTTTTCCCCCAAAAGAGGCGAGGCTCACCAGCTGACGACGACGCAGGACCTCCT CACGAGCATGAATTCGTACCCCTTCCTCGACAATAAGCGCAAGCCCATCTTCACCAGCGACTTGGAGGACATTGT GCCGCGGCTGCGGCGGGAGCGGGTGATTGACATTACCGACTCGCCGCTCGTGTCGGCCTCGAGCCTCCGGACCAA GCTGGAGGTGCTGCACCGGTCGGCCGAGCTCGACGGCGGGCTGCCCATTGTGCGACGCGGGGTGCTGGTCGGGCT CATCCCGGCGCCAGACCTCGAGTACGCGCTGGATCAGCTGGAAGACGAGGAAACGAGCATGTGTCTCATGGATCG GGTACCGAGCATCGATGATGACGACGTGTGCGATGCCGACCCGACGGACTTTGCCCGGTACATAGATCCGGTGAG TCGGCCGCGGGTCCCCGGAGAGAGGGGGGGAAGGAGAGCTGCTACTGACAGAAGTGTGTGTGTGTGTGTGTGGTG TGGCAGGCTCCGGTGGCGCTAGACATCAGGTCGCCCATGGACCTCGTGTACGAGTGTTTCGTCAAGCTGGGCCTG CGGTACATTTGCGTGCTGAAGGACGGCAAATACGCGGGCATGGTAAGCAGTGCGGGCTCTCACCATGCTACGTGG TGTACTGACACGGACGACGATGCAGACACACAAGAAGACGTTTGTCAAGTACATGAGGCAACTCGAAGAGGCTGG GGACTAG |