Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6384
Gene name
Locationscaffold_557:3275..5825
Strand+
Gene length (bp)2550
Transcript length (bp)2250
Coding sequence length (bp)2247
Protein length (aa) 749

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.5

Transmembrane Domains

Domain # Start End Length
1 643 665 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.02 0.0 0.14
CcL In ants, during behavior modification 0.19 0.0 0.49
CcD In ants, recently dead 0.06 0.0 0.25

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 1.0 no
SC16a CcD 1.0 no
CcL CcD 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6384
MNISIASALIAAGIFLARQICPNALVYICSKRLGYSNSAATCAYDEGVRPSVVWIGRLVPAVAILLSIASVVTPL
GLYSVVVAGKPVEATFQYVRDSSIFGRNTVRLPDGDMPLRSCSVFTNISRPQRGCYTGEGRLRIQSVSPALREVF
SSGADDGTLSTVFDIRWRRRLTKAMDNNQVPVVTSKPLHRGTFRSIKSILLNERYDAIEGLIVDTIKGGVGFRNH
TVPIGQKLGAEWREDLLFVEPETVCVDTDISIDWMVDEGDVTYGKGYVADRGGLAGLALNKRPEPEIGHPQRKAD
LHGRARAAAWDFVSMFDDFFNGSFSTSDGSAASVSNDSSIFPLPLWAVTNDIRLSNDFSSELSWIRYETEVAGSR
RGVIEYVKPPQMLVARSTSINDGCRGVQSSAFATPRGIFVQCGIMRSWVLKPAYGYRRNNFYACASAVKAVIKSV
GFTYNGTTPHLEGLQVTDIRDKQYEDGESMPLWGVEDTRDAHGKGPLSPLWGIISPEYADGPNLTTYRQPSLYLS
GPMTGSGVQVDAFGEFGNLAGIHFAGQMMRSAYCTDDSRNEWNQTACPRIFDYHGRTSMALQEKWVKLTASAETA
STIPNLIFTDLAANAVTGTKGVGVEKRVVRPQVPTVTFNLVYMPPAALGLAATLLIIMMAFAEAFRGESGIAAMR
HHMQRLAPGRIFTTLLGPAGKEEGLNMGSKAWSSRFGARTYDTFKLYRVVESVDEYPERTSDHEQVSGKGGDVE
Coding >Ophio5|6384
ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGCGCGGCAAATCTGCCCCAACGCCCTC
GTCTATATATGCTCGAAACGCTTAGGATACTCTAATTCAGCAGCGACGTGCGCGTACGACGAGGGCGTGCGGCCC
AGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGTCCGTCGTTACGCCATTG
GGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCAATACGTGCGCGATTCCTCCATATTC
GGCCGGAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGA
CCCCAACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTT
TCCAGCGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATG
GACAATAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTC
TTGAACGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCAT
ACCGTTCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGC
GTTGATACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGAT
CGAGGCGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGAT
CTGCACGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCG
ACCTCTGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAAC
GACATCCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGA
CGTGGCGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAACGACGGGTGCCGC
GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC
AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC
GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA
GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC
TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA
GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT
GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA
TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA
TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG
AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC
GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG
CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA
AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC
GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAG
Transcript >Ophio5|6384
ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGCGCGGCAAATCTGCCCCAACGCCCTC
GTCTATATATGCTCGAAACGCTTAGGATACTCTAATTCAGCAGCGACGTGCGCGTACGACGAGGGCGTGCGGCCC
AGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGTCCGTCGTTACGCCATTG
GGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCAATACGTGCGCGATTCCTCCATATTC
GGCCGGAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGA
CCCCAACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTT
TCCAGCGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATG
GACAATAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTC
TTGAACGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCAT
ACCGTTCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGC
GTTGATACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGAT
CGAGGCGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGAT
CTGCACGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCG
ACCTCTGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAAC
GACATCCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGA
CGTGGCGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAACGACGGGTGCCGC
GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC
AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC
GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA
GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC
TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA
GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT
GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA
TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA
TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG
AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC
GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG
CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA
AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC
GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAGTGA
Gene >Ophio5|6384
ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGGTCCGTAGCCATATCCACTCATAGTG
CAGACAAGCTGACGACTTTGGCTTACAGCGCGGCAAATCTGCCCCAACGCCCTCGTCTATATATGCTCGAAACGC
TTAGGATACTCTAATTCAGCAGCGACGTGGTATGTCCGACGTGCAACAGCGTTTCGGCGAGGCTGATCCCCTTGG
CCGACAGGACGGCGAGCTCCAAGATAATGGAGCAGTCATACTGGCCCTTTCTGCTTCGGACTGACAGCGCGTACG
ACGAGGGCGTGCGGCCCAGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGT
CCGTCGTTACGCCATTGGGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCGTGAGAAGC
AGCAAATGTATTGAACATTGCGCGGGATAACTGATACAAGCTAGAATACGTGCGCGATTCCTCCATATTCGGCCG
GAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGACCCCA
ACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTTTCCAG
CGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATGGACAA
TAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTCTTGAA
CGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCATACCGT
TCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGCGTTGA
TACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGATCGAGG
CGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGATCTGCA
CGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCGACCTC
TGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAACGACAT
CCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGACGTGG
CGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAGTATGTGCAAGCCCACGAA
TGAACGAAAGAAAGACTTGAGTCTTACGTCGGATACTGAGCCAGAGATACCAAACTCCAAGACGACGGGTGCCGC
GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC
AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC
GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA
GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC
TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA
GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT
GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA
TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA
TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG
AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC
GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG
CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA
AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC
GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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