Protein ID | Ophio5|6384 |
Gene name | |
Location | scaffold_557:3275..5825 |
Strand | + |
Gene length (bp) | 2550 |
Transcript length (bp) | 2250 |
Coding sequence length (bp) | 2247 |
Protein length (aa) | 749 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane | Signal peptide|Transmembrane domain | 0.0841 | 0.0595 | 0.1152 | 0.7338 | 0.0188 | 0.0104 | 0.301 | 0.4636 | 0.4265 | 0.0062 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 643 | 665 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 169 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6384 MNISIASALIAAGIFLARQICPNALVYICSKRLGYSNSAATCAYDEGVRPSVVWIGRLVPAVAILLSIASVVTPL GLYSVVVAGKPVEATFQYVRDSSIFGRNTVRLPDGDMPLRSCSVFTNISRPQRGCYTGEGRLRIQSVSPALREVF SSGADDGTLSTVFDIRWRRRLTKAMDNNQVPVVTSKPLHRGTFRSIKSILLNERYDAIEGLIVDTIKGGVGFRNH TVPIGQKLGAEWREDLLFVEPETVCVDTDISIDWMVDEGDVTYGKGYVADRGGLAGLALNKRPEPEIGHPQRKAD LHGRARAAAWDFVSMFDDFFNGSFSTSDGSAASVSNDSSIFPLPLWAVTNDIRLSNDFSSELSWIRYETEVAGSR RGVIEYVKPPQMLVARSTSINDGCRGVQSSAFATPRGIFVQCGIMRSWVLKPAYGYRRNNFYACASAVKAVIKSV GFTYNGTTPHLEGLQVTDIRDKQYEDGESMPLWGVEDTRDAHGKGPLSPLWGIISPEYADGPNLTTYRQPSLYLS GPMTGSGVQVDAFGEFGNLAGIHFAGQMMRSAYCTDDSRNEWNQTACPRIFDYHGRTSMALQEKWVKLTASAETA STIPNLIFTDLAANAVTGTKGVGVEKRVVRPQVPTVTFNLVYMPPAALGLAATLLIIMMAFAEAFRGESGIAAMR HHMQRLAPGRIFTTLLGPAGKEEGLNMGSKAWSSRFGARTYDTFKLYRVVESVDEYPERTSDHEQVSGKGGDVE |
Coding | >Ophio5|6384 ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGCGCGGCAAATCTGCCCCAACGCCCTC GTCTATATATGCTCGAAACGCTTAGGATACTCTAATTCAGCAGCGACGTGCGCGTACGACGAGGGCGTGCGGCCC AGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGTCCGTCGTTACGCCATTG GGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCAATACGTGCGCGATTCCTCCATATTC GGCCGGAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGA CCCCAACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTT TCCAGCGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATG GACAATAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTC TTGAACGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCAT ACCGTTCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGC GTTGATACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGAT CGAGGCGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGAT CTGCACGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCG ACCTCTGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAAC GACATCCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGA CGTGGCGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAACGACGGGTGCCGC GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAG |
Transcript | >Ophio5|6384 ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGCGCGGCAAATCTGCCCCAACGCCCTC GTCTATATATGCTCGAAACGCTTAGGATACTCTAATTCAGCAGCGACGTGCGCGTACGACGAGGGCGTGCGGCCC AGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGTCCGTCGTTACGCCATTG GGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCAATACGTGCGCGATTCCTCCATATTC GGCCGGAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGA CCCCAACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTT TCCAGCGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATG GACAATAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTC TTGAACGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCAT ACCGTTCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGC GTTGATACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGAT CGAGGCGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGAT CTGCACGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCG ACCTCTGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAAC GACATCCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGA CGTGGCGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAACGACGGGTGCCGC GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAGTGA |
Gene | >Ophio5|6384 ATGAATATCAGCATTGCCTCTGCTTTGATAGCAGCGGGAATCTTCCTCGGTCCGTAGCCATATCCACTCATAGTG CAGACAAGCTGACGACTTTGGCTTACAGCGCGGCAAATCTGCCCCAACGCCCTCGTCTATATATGCTCGAAACGC TTAGGATACTCTAATTCAGCAGCGACGTGGTATGTCCGACGTGCAACAGCGTTTCGGCGAGGCTGATCCCCTTGG CCGACAGGACGGCGAGCTCCAAGATAATGGAGCAGTCATACTGGCCCTTTCTGCTTCGGACTGACAGCGCGTACG ACGAGGGCGTGCGGCCCAGCGTCGTTTGGATCGGAAGGCTCGTTCCTGCTGTGGCGATTCTGCTCTCGATCGCGT CCGTCGTTACGCCATTGGGGCTGTATAGCGTCGTGGTGGCGGGGAAGCCTGTCGAGGCAACGTTTCGTGAGAAGC AGCAAATGTATTGAACATTGCGCGGGATAACTGATACAAGCTAGAATACGTGCGCGATTCCTCCATATTCGGCCG GAACACGGTCAGGCTTCCTGACGGCGACATGCCGTTGCGAAGCTGTTCTGTCTTCACCAACATCTCCAGACCCCA ACGGGGCTGCTACACCGGCGAGGGACGTCTGAGGATACAAAGTGTCTCTCCTGCATTGCGCGAGGTGTTTTCCAG CGGCGCCGATGACGGGACCTTGTCTACTGTCTTCGACATCCGCTGGAGGCGTCGCCTTACAAAGGCAATGGACAA TAATCAGGTCCCCGTCGTGACTTCGAAGCCTCTACACAGGGGCACCTTTCGAAGCATCAAAAGTATTCTCTTGAA CGAGCGTTATGATGCCATCGAGGGGCTCATCGTCGACACGATCAAAGGCGGCGTGGGATTTCGAAACCATACCGT TCCTATTGGTCAGAAGCTAGGCGCTGAATGGCGAGAAGATCTCCTTTTTGTCGAACCAGAGACCGTCTGCGTTGA TACAGACATCTCCATCGATTGGATGGTCGACGAGGGCGACGTCACGTACGGCAAAGGTTACGTCGCCGATCGAGG CGGCCTCGCGGGACTTGCGCTGAACAAAAGGCCGGAGCCGGAAATTGGCCATCCTCAGCGAAAGGCCGATCTGCA CGGAAGAGCCAGGGCCGCTGCTTGGGATTTTGTCTCCATGTTTGACGACTTCTTCAACGGCAGTTTCTCGACCTC TGACGGTTCCGCGGCATCAGTCTCGAATGACAGCAGCATATTTCCCCTACCCCTATGGGCTGTGACCAACGACAT CCGCTTATCCAACGACTTTTCCAGCGAGCTATCTTGGATCAGATACGAGACAGAAGTGGCAGGGTCGAGACGTGG CGTCATTGAGTATGTGAAGCCGCCCCAGATGTTGGTCGCACGTTCTACCTCGATAAGTATGTGCAAGCCCACGAA TGAACGAAAGAAAGACTTGAGTCTTACGTCGGATACTGAGCCAGAGATACCAAACTCCAAGACGACGGGTGCCGC GGAGTCCAGAGTAGTGCATTCGCCACGCCACGGGGCATCTTCGTCCAGTGCGGAATCATGCGAAGCTGGGTACTC AAGCCTGCTTACGGTTACAGAAGAAACAACTTTTACGCATGTGCCTCGGCCGTCAAAGCAGTCATCAAGAGCGTC GGCTTCACATACAACGGCACGACACCACATCTAGAAGGACTTCAGGTCACAGACATCCGGGATAAGCAGTACGAA GACGGTGAGAGCATGCCTCTCTGGGGTGTGGAAGACACCAGAGACGCACACGGAAAGGGCCCGCTGAGTCCGCTC TGGGGTATTATATCGCCCGAGTATGCGGACGGGCCGAACCTGACCACCTATCGCCAGCCATCCCTCTACCTCTCA GGGCCGATGACAGGTTCTGGCGTGCAGGTAGACGCATTTGGCGAATTCGGAAACCTGGCGGGCATCCACTTCGCT GGCCAGATGATGCGAAGTGCTTACTGCACCGACGATAGCCGCAACGAGTGGAATCAGACGGCTTGCCCTAGGATA TTCGATTACCACGGCCGGACGAGCATGGCTCTCCAGGAGAAGTGGGTTAAGCTCACTGCCAGCGCAGAAACGGCA TCCACGATCCCAAACCTGATCTTCACAGATCTAGCCGCCAACGCCGTCACCGGCACAAAGGGCGTCGGAGTGGAG AAAAGAGTCGTCAGACCGCAAGTCCCAACCGTCACGTTTAACCTCGTCTACATGCCACCAGCCGCCCTCGGGCTC GCCGCCACCCTCCTCATCATCATGATGGCTTTTGCAGAGGCGTTTCGTGGGGAGAGCGGAATAGCTGCCATGAGG CACCACATGCAGCGGCTGGCTCCGGGACGTATATTCACGACGCTTCTCGGGCCGGCTGGCAAGGAGGAAGGCTTA AACATGGGAAGTAAAGCCTGGAGCAGTCGATTTGGGGCGAGGACATATGACACTTTCAAGTTATACCGGGTAGTC GAGAGTGTTGACGAGTATCCGGAGAGGACATCTGACCACGAACAAGTATCGGGGAAGGGTGGAGATGTTGAGTGA |