Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6376
Gene name
Locationscaffold_555:4109..5492
Strand-
Gene length (bp)1383
Transcript length (bp)1383
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15463 ECM11 Extracellular mutant protein 11 2.0E-42 325 454

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 28.94 14.39 43.49
CcL In ants, during behavior modification 54.08 26.81 81.35
CcD In ants, recently dead 44.09 23.58 64.61

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.011056 yes
SC16a CcD 0.083613 no
CcL CcD 0.421409 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6376
MPPSLKEKSGRLQAFVRKDSDGAETMAQEFQTADMMRLEEAQLSSRSPTRQELADAARLSMPVALRNGRVSHRRQ
GSLAAGRTHPTSPQRAVNTARQGSGEVFTGSQLGDDFMNSGISTPQNEAESSEEGDATPNAKKTNQTRQDNTGRG
IQNGPPPSAFRIEENLMMSIIPTKERRVLPHIMDGFHDDVVPAIKRTSYGPQQKRPSSTLLLRPELPTREVKVKR
LPSNSRHVAHERREVTRSSSTDGTKWQGQRELSHVRPAGTVIELDDDLGSVSAHEESYPPPKPDNPKGVNRRPLG
GSPVPANIALQKQPKERKRRRLSADYDDNMLSSMTFSDLQNEAFDVDPAKVSSQNGHDASAKLPLKLEQFRQQEE
KEQKHMFESMSMDDWEASGDWFVEQFTDLMKRLREARRSKRRMIQAFEDEAARREEAVRHRSETIDRKLIKMRQD
GQRVVEDRRA
Coding >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCG
Transcript >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCGTAG
Gene >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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