Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6376
Gene name
Locationscaffold_555:4109..5492
Strand-
Gene length (bp)1383
Transcript length (bp)1383
Coding sequence length (bp)1380
Protein length (aa) 460

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF15463 ECM11 Extracellular mutant protein 11 2.0E-42 325 454

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6376
MPPSLKEKSGRLQAFVRKDSDGAETMAQEFQTADMMRLEEAQLSSRSPTRQELADAARLSMPVALRNGRVSHRRQ
GSLAAGRTHPTSPQRAVNTARQGSGEVFTGSQLGDDFMNSGISTPQNEAESSEEGDATPNAKKTNQTRQDNTGRG
IQNGPPPSAFRIEENLMMSIIPTKERRVLPHIMDGFHDDVVPAIKRTSYGPQQKRPSSTLLLRPELPTREVKVKR
LPSNSRHVAHERREVTRSSSTDGTKWQGQRELSHVRPAGTVIELDDDLGSVSAHEESYPPPKPDNPKGVNRRPLG
GSPVPANIALQKQPKERKRRRLSADYDDNMLSSMTFSDLQNEAFDVDPAKVSSQNGHDASAKLPLKLEQFRQQEE
KEQKHMFESMSMDDWEASGDWFVEQFTDLMKRLREARRSKRRMIQAFEDEAARREEAVRHRSETIDRKLIKMRQD
GQRVVEDRRA
Coding >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCG
Transcript >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCGTAG
Gene >Ophio5|6376
ATGCCCCCGAGTCTTAAGGAGAAGAGCGGCCGTTTGCAGGCTTTCGTCCGCAAGGACTCGGACGGTGCCGAAACG
ATGGCGCAAGAATTTCAGACTGCGGACATGATGCGGCTGGAAGAAGCTCAACTTTCCTCACGCAGCCCGACCCGA
CAAGAACTGGCCGACGCCGCCAGGCTCTCCATGCCAGTGGCTCTTCGCAACGGCCGCGTCTCGCATCGGCGACAA
GGGAGCCTCGCTGCCGGTCGCACGCATCCAACATCGCCGCAACGCGCCGTCAACACAGCTCGGCAGGGCTCGGGC
GAAGTCTTTACCGGCTCGCAGCTTGGCGACGACTTTATGAACTCGGGTATCTCGACTCCCCAGAATGAGGCCGAG
AGCTCTGAAGAAGGAGACGCCACCCCCAACGCGAAAAAGACCAACCAGACTCGTCAAGACAACACCGGCAGGGGC
ATACAGAACGGTCCGCCACCGTCCGCATTTCGCATTGAGGAAAATCTCATGATGTCCATTATCCCGACGAAAGAG
CGCCGCGTGCTGCCGCACATCATGGATGGTTTTCATGATGACGTAGTGCCTGCAATCAAGAGAACCAGCTACGGG
CCCCAACAAAAGCGACCATCTTCGACACTTTTGCTCAGGCCGGAGCTTCCCACTCGCGAGGTCAAGGTCAAGAGG
CTGCCGTCGAACAGCCGACATGTCGCGCACGAGAGACGAGAAGTGACCAGGTCGTCTTCCACTGACGGCACAAAG
TGGCAAGGACAGCGTGAACTAAGTCATGTACGCCCGGCCGGCACCGTCATCGAGTTGGACGATGATCTCGGCTCC
GTCTCTGCACATGAGGAATCTTATCCGCCGCCAAAGCCGGACAACCCGAAGGGCGTAAATCGGCGGCCGCTGGGA
GGCAGCCCCGTGCCCGCCAACATTGCGCTGCAGAAGCAGCCCAAGGAACGAAAGCGACGTCGGCTCAGCGCAGAT
TACGACGACAACATGCTCAGCTCCATGACGTTCAGCGATCTGCAGAATGAAGCTTTTGATGTCGACCCTGCCAAG
GTATCCAGCCAGAACGGCCACGATGCATCGGCCAAACTCCCTCTCAAGCTGGAGCAGTTCCGGCAACAGGAAGAG
AAGGAGCAGAAACACATGTTTGAGTCCATGTCCATGGACGACTGGGAGGCCTCGGGCGATTGGTTTGTAGAGCAG
TTTACGGATCTGATGAAGCGACTACGAGAGGCCAGACGCAGCAAGCGCCGCATGATACAAGCCTTTGAAGACGAG
GCTGCGCGGCGCGAGGAGGCTGTCCGCCACCGGTCCGAGACGATTGACCGAAAACTGATCAAGATGAGGCAGGAC
GGGCAGCGCGTGGTCGAGGATAGGAGGGCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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