Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6374
Gene name
Locationscaffold_555:271..2194
Strand-
Gene length (bp)1923
Transcript length (bp)1923
Coding sequence length (bp)1920
Protein length (aa) 640

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1 SV=3 453 573 1.0E-21
sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1 SV=3 453 573 2.0E-21
sp|Q9NWF9|RN216_HUMAN E3 ubiquitin-protein ligase RNF216 OS=Homo sapiens GN=RNF216 PE=1 SV=3 213 372 1.0E-06
sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1 SV=3 217 372 8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 394 425 31

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6374
MVFSGLLSSGGDKASASRARSGSDTLIYDEAQLPCVPPERPNLRDLNTSLEALTAIFPDVQMDVFRELLSKFDGE
SRLALVAEALLKNRVAWVKGRWRTVADRQADPVSGSLSKADSFRSPEYLEAVRTLAWHEFRGLSRSTINAVLAES
NHSYLDARRTLVSLSSQSWRFTISSIILRRRKPIRPGEAERHPLVLWRPVGGGAVPAIRPTGSAELDRELYDALV
RPLQARDREAREAADRRLAVRLNHDEAGRAGAMYECACCFSTTAFEEFACCNQIGHMICFRCILHATKEALYGQA
WLSSIDVDTGTLKCLAIDGDGCAGYIPSDHLHRALMDDRTGADMVHRLDQRLAEHSLVASGLPLVRCPFCSYVEV
DDMSGPGREAWPRLKMDDVLGLILLVLAAAALVLSLPVALLSSLVCVVVGSDRSAWRLMRAEWDRALGRLYRRRR
GLRFSCQSPKCGRMSCLSCHKSWTDIHVCNESSLVALRTQVEQAMSMAIKRVCPRCNTSFVKNTGCNKLTCPCGY
KMCYVCRADLGDVGYRHFCDHFRPDGDPKPCRECDRCNLWESEDVERVLHEARAEAERRWKDKERRHLSGSEKAY
LETGVAGRRSAAASVGRMLGGGGLPTGPELLDLVVDALYA
Coding >Ophio5|6374
ATGGTCTTCTCCGGCCTGCTCTCCTCGGGCGGCGATAAGGCGTCAGCGAGCCGCGCTCGGTCCGGAAGCGATACT
CTCATCTACGACGAGGCTCAGCTGCCGTGCGTCCCGCCGGAGCGGCCCAACCTGCGCGATCTCAATACCAGCCTC
GAGGCTCTGACGGCCATCTTTCCCGATGTCCAGATGGACGTCTTCCGCGAGCTGCTGTCCAAGTTCGATGGGGAG
TCGCGTTTGGCGCTCGTGGCCGAGGCCCTTCTCAAGAACCGTGTGGCATGGGTCAAGGGTCGGTGGCGGACCGTG
GCGGATCGTCAGGCGGACCCTGTCTCCGGAAGTCTGTCCAAGGCCGACTCGTTCCGCAGCCCCGAGTATCTCGAG
GCCGTCCGGACGCTGGCCTGGCACGAGTTTCGCGGACTGTCGCGATCTACCATCAATGCCGTTCTCGCCGAGTCC
AACCACTCGTATCTCGACGCCCGCCGCACCCTTGTCTCGCTCTCCTCTCAGTCGTGGCGCTTTACCATCTCGTCT
ATTATCCTGCGCCGTCGGAAGCCGATCCGGCCCGGCGAGGCTGAGAGGCATCCGCTTGTACTGTGGCGCCCGGTC
GGCGGCGGCGCTGTGCCCGCCATCCGGCCGACCGGCAGCGCCGAGCTTGACCGTGAGCTCTACGATGCCCTCGTC
CGCCCCCTCCAGGCTCGCGACAGGGAGGCCCGCGAAGCGGCCGACCGCAGGCTTGCTGTCCGGCTCAACCACGAC
GAGGCCGGCCGGGCCGGCGCCATGTACGAGTGCGCGTGCTGCTTCTCGACGACGGCCTTTGAGGAGTTTGCGTGC
TGCAACCAGATTGGCCATATGATCTGTTTCCGCTGCATCCTGCACGCCACCAAGGAGGCGTTGTATGGCCAGGCA
TGGCTCAGCAGCATCGACGTCGACACGGGCACCCTCAAGTGTCTGGCGATTGACGGCGACGGCTGCGCCGGCTAC
ATCCCGTCGGATCACCTCCACCGGGCCCTGATGGACGACCGGACGGGCGCCGACATGGTCCACCGGCTGGATCAG
CGGCTGGCGGAGCACAGCCTGGTGGCGTCGGGACTACCGCTTGTCCGCTGTCCCTTCTGCAGCTACGTCGAGGTG
GACGACATGAGCGGGCCCGGACGCGAGGCCTGGCCGCGGCTCAAGATGGACGACGTGCTCGGCTTGATACTGCTG
GTGCTCGCGGCGGCGGCGCTGGTGCTGTCGCTGCCCGTGGCCCTGCTGTCGTCTCTCGTCTGCGTCGTCGTCGGC
TCGGACCGCTCGGCCTGGCGCCTCATGCGCGCGGAATGGGACCGGGCTCTCGGCAGGCTGTACCGGCGTCGGCGC
GGACTACGCTTCTCGTGCCAGAGCCCAAAGTGCGGACGGATGTCGTGTCTCTCGTGCCACAAGTCGTGGACGGAC
ATTCACGTCTGCAACGAGTCGTCGCTGGTGGCGCTCCGGACGCAGGTCGAGCAAGCCATGAGCATGGCCATCAAG
CGCGTGTGCCCGCGTTGCAACACGTCTTTCGTCAAGAACACGGGCTGCAACAAGCTGACGTGTCCCTGCGGCTAC
AAGATGTGCTACGTCTGCCGGGCCGACCTGGGCGACGTGGGCTACCGTCACTTCTGCGACCACTTCCGGCCGGAC
GGCGATCCCAAGCCGTGCCGCGAGTGCGACCGCTGCAACCTGTGGGAGTCGGAGGACGTCGAGCGCGTCCTGCAC
GAGGCCCGCGCCGAGGCCGAGCGGCGCTGGAAGGACAAGGAGAGGCGCCATCTGTCGGGCTCGGAAAAGGCCTAC
CTGGAGACGGGAGTTGCTGGTCGTCGCTCTGCCGCCGCCAGCGTCGGACGGATGCTCGGCGGCGGTGGCCTCCCG
ACGGGGCCGGAACTGCTGGATCTCGTCGTCGACGCTCTGTATGCT
Transcript >Ophio5|6374
ATGGTCTTCTCCGGCCTGCTCTCCTCGGGCGGCGATAAGGCGTCAGCGAGCCGCGCTCGGTCCGGAAGCGATACT
CTCATCTACGACGAGGCTCAGCTGCCGTGCGTCCCGCCGGAGCGGCCCAACCTGCGCGATCTCAATACCAGCCTC
GAGGCTCTGACGGCCATCTTTCCCGATGTCCAGATGGACGTCTTCCGCGAGCTGCTGTCCAAGTTCGATGGGGAG
TCGCGTTTGGCGCTCGTGGCCGAGGCCCTTCTCAAGAACCGTGTGGCATGGGTCAAGGGTCGGTGGCGGACCGTG
GCGGATCGTCAGGCGGACCCTGTCTCCGGAAGTCTGTCCAAGGCCGACTCGTTCCGCAGCCCCGAGTATCTCGAG
GCCGTCCGGACGCTGGCCTGGCACGAGTTTCGCGGACTGTCGCGATCTACCATCAATGCCGTTCTCGCCGAGTCC
AACCACTCGTATCTCGACGCCCGCCGCACCCTTGTCTCGCTCTCCTCTCAGTCGTGGCGCTTTACCATCTCGTCT
ATTATCCTGCGCCGTCGGAAGCCGATCCGGCCCGGCGAGGCTGAGAGGCATCCGCTTGTACTGTGGCGCCCGGTC
GGCGGCGGCGCTGTGCCCGCCATCCGGCCGACCGGCAGCGCCGAGCTTGACCGTGAGCTCTACGATGCCCTCGTC
CGCCCCCTCCAGGCTCGCGACAGGGAGGCCCGCGAAGCGGCCGACCGCAGGCTTGCTGTCCGGCTCAACCACGAC
GAGGCCGGCCGGGCCGGCGCCATGTACGAGTGCGCGTGCTGCTTCTCGACGACGGCCTTTGAGGAGTTTGCGTGC
TGCAACCAGATTGGCCATATGATCTGTTTCCGCTGCATCCTGCACGCCACCAAGGAGGCGTTGTATGGCCAGGCA
TGGCTCAGCAGCATCGACGTCGACACGGGCACCCTCAAGTGTCTGGCGATTGACGGCGACGGCTGCGCCGGCTAC
ATCCCGTCGGATCACCTCCACCGGGCCCTGATGGACGACCGGACGGGCGCCGACATGGTCCACCGGCTGGATCAG
CGGCTGGCGGAGCACAGCCTGGTGGCGTCGGGACTACCGCTTGTCCGCTGTCCCTTCTGCAGCTACGTCGAGGTG
GACGACATGAGCGGGCCCGGACGCGAGGCCTGGCCGCGGCTCAAGATGGACGACGTGCTCGGCTTGATACTGCTG
GTGCTCGCGGCGGCGGCGCTGGTGCTGTCGCTGCCCGTGGCCCTGCTGTCGTCTCTCGTCTGCGTCGTCGTCGGC
TCGGACCGCTCGGCCTGGCGCCTCATGCGCGCGGAATGGGACCGGGCTCTCGGCAGGCTGTACCGGCGTCGGCGC
GGACTACGCTTCTCGTGCCAGAGCCCAAAGTGCGGACGGATGTCGTGTCTCTCGTGCCACAAGTCGTGGACGGAC
ATTCACGTCTGCAACGAGTCGTCGCTGGTGGCGCTCCGGACGCAGGTCGAGCAAGCCATGAGCATGGCCATCAAG
CGCGTGTGCCCGCGTTGCAACACGTCTTTCGTCAAGAACACGGGCTGCAACAAGCTGACGTGTCCCTGCGGCTAC
AAGATGTGCTACGTCTGCCGGGCCGACCTGGGCGACGTGGGCTACCGTCACTTCTGCGACCACTTCCGGCCGGAC
GGCGATCCCAAGCCGTGCCGCGAGTGCGACCGCTGCAACCTGTGGGAGTCGGAGGACGTCGAGCGCGTCCTGCAC
GAGGCCCGCGCCGAGGCCGAGCGGCGCTGGAAGGACAAGGAGAGGCGCCATCTGTCGGGCTCGGAAAAGGCCTAC
CTGGAGACGGGAGTTGCTGGTCGTCGCTCTGCCGCCGCCAGCGTCGGACGGATGCTCGGCGGCGGTGGCCTCCCG
ACGGGGCCGGAACTGCTGGATCTCGTCGTCGACGCTCTGTATGCTTGA
Gene >Ophio5|6374
ATGGTCTTCTCCGGCCTGCTCTCCTCGGGCGGCGATAAGGCGTCAGCGAGCCGCGCTCGGTCCGGAAGCGATACT
CTCATCTACGACGAGGCTCAGCTGCCGTGCGTCCCGCCGGAGCGGCCCAACCTGCGCGATCTCAATACCAGCCTC
GAGGCTCTGACGGCCATCTTTCCCGATGTCCAGATGGACGTCTTCCGCGAGCTGCTGTCCAAGTTCGATGGGGAG
TCGCGTTTGGCGCTCGTGGCCGAGGCCCTTCTCAAGAACCGTGTGGCATGGGTCAAGGGTCGGTGGCGGACCGTG
GCGGATCGTCAGGCGGACCCTGTCTCCGGAAGTCTGTCCAAGGCCGACTCGTTCCGCAGCCCCGAGTATCTCGAG
GCCGTCCGGACGCTGGCCTGGCACGAGTTTCGCGGACTGTCGCGATCTACCATCAATGCCGTTCTCGCCGAGTCC
AACCACTCGTATCTCGACGCCCGCCGCACCCTTGTCTCGCTCTCCTCTCAGTCGTGGCGCTTTACCATCTCGTCT
ATTATCCTGCGCCGTCGGAAGCCGATCCGGCCCGGCGAGGCTGAGAGGCATCCGCTTGTACTGTGGCGCCCGGTC
GGCGGCGGCGCTGTGCCCGCCATCCGGCCGACCGGCAGCGCCGAGCTTGACCGTGAGCTCTACGATGCCCTCGTC
CGCCCCCTCCAGGCTCGCGACAGGGAGGCCCGCGAAGCGGCCGACCGCAGGCTTGCTGTCCGGCTCAACCACGAC
GAGGCCGGCCGGGCCGGCGCCATGTACGAGTGCGCGTGCTGCTTCTCGACGACGGCCTTTGAGGAGTTTGCGTGC
TGCAACCAGATTGGCCATATGATCTGTTTCCGCTGCATCCTGCACGCCACCAAGGAGGCGTTGTATGGCCAGGCA
TGGCTCAGCAGCATCGACGTCGACACGGGCACCCTCAAGTGTCTGGCGATTGACGGCGACGGCTGCGCCGGCTAC
ATCCCGTCGGATCACCTCCACCGGGCCCTGATGGACGACCGGACGGGCGCCGACATGGTCCACCGGCTGGATCAG
CGGCTGGCGGAGCACAGCCTGGTGGCGTCGGGACTACCGCTTGTCCGCTGTCCCTTCTGCAGCTACGTCGAGGTG
GACGACATGAGCGGGCCCGGACGCGAGGCCTGGCCGCGGCTCAAGATGGACGACGTGCTCGGCTTGATACTGCTG
GTGCTCGCGGCGGCGGCGCTGGTGCTGTCGCTGCCCGTGGCCCTGCTGTCGTCTCTCGTCTGCGTCGTCGTCGGC
TCGGACCGCTCGGCCTGGCGCCTCATGCGCGCGGAATGGGACCGGGCTCTCGGCAGGCTGTACCGGCGTCGGCGC
GGACTACGCTTCTCGTGCCAGAGCCCAAAGTGCGGACGGATGTCGTGTCTCTCGTGCCACAAGTCGTGGACGGAC
ATTCACGTCTGCAACGAGTCGTCGCTGGTGGCGCTCCGGACGCAGGTCGAGCAAGCCATGAGCATGGCCATCAAG
CGCGTGTGCCCGCGTTGCAACACGTCTTTCGTCAAGAACACGGGCTGCAACAAGCTGACGTGTCCCTGCGGCTAC
AAGATGTGCTACGTCTGCCGGGCCGACCTGGGCGACGTGGGCTACCGTCACTTCTGCGACCACTTCCGGCCGGAC
GGCGATCCCAAGCCGTGCCGCGAGTGCGACCGCTGCAACCTGTGGGAGTCGGAGGACGTCGAGCGCGTCCTGCAC
GAGGCCCGCGCCGAGGCCGAGCGGCGCTGGAAGGACAAGGAGAGGCGCCATCTGTCGGGCTCGGAAAAGGCCTAC
CTGGAGACGGGAGTTGCTGGTCGTCGCTCTGCCGCCGCCAGCGTCGGACGGATGCTCGGCGGCGGTGGCCTCCCG
ACGGGGCCGGAACTGCTGGATCTCGTCGTCGACGCTCTGTATGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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