Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6348
Gene name
Locationscaffold_55:35044..36095
Strand+
Gene length (bp)1051
Transcript length (bp)939
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09335 SNARE_assoc SNARE associated Golgi protein 4.7E-15 59 173

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana (strain B05.10) GN=tvp38 PE=3 SV=1 1 289 4.0E-68
sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1 1 289 2.0E-66
sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2 23 274 1.0E-60
sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tvp38 PE=3 SV=1 23 239 3.0E-60
sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tvp38 PE=3 SV=1 23 245 6.0E-59
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Swissprot ID Swissprot Description Start End E-value
sp|A6RIB9|TVP38_BOTFB Golgi apparatus membrane protein tvp38 OS=Botryotinia fuckeliana (strain B05.10) GN=tvp38 PE=3 SV=1 1 289 4.0E-68
sp|A7EFY0|TVP38_SCLS1 Golgi apparatus membrane protein tvp38 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tvp38 PE=3 SV=1 1 289 2.0E-66
sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2 23 274 1.0E-60
sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tvp38 PE=3 SV=1 23 239 3.0E-60
sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tvp38 PE=3 SV=1 23 245 6.0E-59
sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=tvp38 PE=3 SV=1 5 245 1.0E-58
sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3 SV=1 23 245 9.0E-58
sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tvp38 PE=3 SV=1 23 237 2.0E-57
sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2 23 274 4.0E-56
sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1 23 241 5.0E-55
sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2 1 302 3.0E-46
sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=TVP38 PE=3 SV=1 33 227 1.0E-36
sp|A7TMU9|TVP38_VANPO Golgi apparatus membrane protein TVP38 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TVP38 PE=3 SV=1 6 225 1.0E-31
sp|Q6FTI0|TVP38_CANGA Golgi apparatus membrane protein TVP38 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TVP38 PE=3 SV=1 1 230 3.0E-31
sp|P36164|TVP38_YEAST Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TVP38 PE=1 SV=1 34 186 5.0E-27
sp|A7A047|TVP38_YEAS7 Golgi apparatus membrane protein TVP38 OS=Saccharomyces cerevisiae (strain YJM789) GN=TVP38 PE=3 SV=1 34 186 5.0E-27
sp|Q759P7|TVP38_ASHGO Golgi apparatus membrane protein TVP38 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TVP38 PE=3 SV=1 51 226 2.0E-26
sp|Q6CXJ8|TVP38_KLULA Golgi apparatus membrane protein TVP38 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TVP38 PE=3 SV=1 42 225 4.0E-24
sp|A8NX72|TVP38_COPC7 Golgi apparatus membrane protein TVP38 OS=Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) GN=TVP38 PE=3 SV=1 6 263 6.0E-24
sp|B2AMJ3|TVP38_PODAN Golgi apparatus membrane protein TVP38 OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=TVP38 PE=3 SV=1 51 227 9.0E-11
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 39 61 22
3 71 93 22
4 149 171 22
5 191 213 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6348
MVVLVGVVGVVVTAAYASHHFFFDWLAPRARVWRGKGGALAVVFLAVFLSAFPPLVGYSTAATVAGFVAGFPAGW
PLAASAAVAGSLAAFFASRSVLAACVERLVGKDTRFVALAQVLRRDGLLCLTAIRFCPLPFSLSNGFLATVPSVS
PWAFALATAISSPKLLVHVFIGSRLALLADEGDTMSSTDKAINYLSMLLSALIGLVVGLVVYRRTMARAAQLARE
GLHHHHQHHHHHHHHHLSSSAAAAEVGYHDADAPLLDPDDAAAVMLDDDLPLWPVDDADARHDDDDHHAKATEQV
GRTGHPPHEFSV
Coding >Ophio5|6348
ATGGTGGTCTTGGTCGGCGTCGTGGGCGTCGTCGTCACGGCAGCCTACGCCTCGCACCACTTCTTCTTCGACTGG
CTCGCGCCACGAGCACGAGTCTGGCGAGGAAAGGGCGGAGCTCTGGCCGTCGTCTTCCTCGCCGTCTTCCTCTCC
GCCTTCCCTCCTCTGGTGGGCTACTCGACGGCGGCGACGGTGGCCGGCTTCGTAGCCGGCTTCCCCGCCGGTTGG
CCGCTGGCCGCTTCCGCCGCCGTCGCCGGTAGCTTGGCCGCCTTTTTCGCTAGTCGCTCCGTCCTCGCTGCCTGT
GTCGAGAGGTTGGTCGGTAAGGATACGAGGTTTGTCGCTTTGGCCCAAGTCTTGAGGAGGGATGGCTTGTTGTGC
TTGACTGCCATTCGCTTTTGTCCCTTGCCGTTTAGTTTGAGTAATGGCTTTCTGGCTACGGTGCCGAGTGTGTCG
CCTTGGGCTTTTGCCCTCGCTACCGCCATTTCCAGTCCAAAGCTCCTCGTCCACGTCTTCATCGGAAGTCGTCTC
GCCCTCCTCGCCGACGAAGGCGACACCATGTCTTCCACCGACAAAGCCATCAACTATCTAAGCATGCTCCTCAGC
GCCCTCATCGGCCTCGTCGTCGGTCTCGTCGTCTACCGTCGCACCATGGCCCGCGCCGCCCAACTAGCCCGTGAA
GGGCTTCATCATCATCACCAACATCATCATCATCATCATCATCATCATCTGTCTTCTTCCGCCGCCGCCGCCGAG
GTCGGCTACCACGATGCCGACGCTCCCCTGCTTGACCCGGATGACGCCGCGGCTGTCATGCTCGATGACGACTTG
CCGCTGTGGCCTGTCGATGACGCTGACGCCCGCCATGACGACGATGACCACCACGCTAAAGCTACAGAGCAGGTG
GGACGCACCGGGCATCCGCCTCACGAGTTTTCTGTC
Transcript >Ophio5|6348
ATGGTGGTCTTGGTCGGCGTCGTGGGCGTCGTCGTCACGGCAGCCTACGCCTCGCACCACTTCTTCTTCGACTGG
CTCGCGCCACGAGCACGAGTCTGGCGAGGAAAGGGCGGAGCTCTGGCCGTCGTCTTCCTCGCCGTCTTCCTCTCC
GCCTTCCCTCCTCTGGTGGGCTACTCGACGGCGGCGACGGTGGCCGGCTTCGTAGCCGGCTTCCCCGCCGGTTGG
CCGCTGGCCGCTTCCGCCGCCGTCGCCGGTAGCTTGGCCGCCTTTTTCGCTAGTCGCTCCGTCCTCGCTGCCTGT
GTCGAGAGGTTGGTCGGTAAGGATACGAGGTTTGTCGCTTTGGCCCAAGTCTTGAGGAGGGATGGCTTGTTGTGC
TTGACTGCCATTCGCTTTTGTCCCTTGCCGTTTAGTTTGAGTAATGGCTTTCTGGCTACGGTGCCGAGTGTGTCG
CCTTGGGCTTTTGCCCTCGCTACCGCCATTTCCAGTCCAAAGCTCCTCGTCCACGTCTTCATCGGAAGTCGTCTC
GCCCTCCTCGCCGACGAAGGCGACACCATGTCTTCCACCGACAAAGCCATCAACTATCTAAGCATGCTCCTCAGC
GCCCTCATCGGCCTCGTCGTCGGTCTCGTCGTCTACCGTCGCACCATGGCCCGCGCCGCCCAACTAGCCCGTGAA
GGGCTTCATCATCATCACCAACATCATCATCATCATCATCATCATCATCTGTCTTCTTCCGCCGCCGCCGCCGAG
GTCGGCTACCACGATGCCGACGCTCCCCTGCTTGACCCGGATGACGCCGCGGCTGTCATGCTCGATGACGACTTG
CCGCTGTGGCCTGTCGATGACGCTGACGCCCGCCATGACGACGATGACCACCACGCTAAAGCTACAGAGCAGGTG
GGACGCACCGGGCATCCGCCTCACGAGTTTTCTGTCTAA
Gene >Ophio5|6348
ATGGTGGTCTTGGTCGGCGTCGTGGGCGTCGTCGTCACGGCAGCCTACGCCTCGCACCACTTCTTCTTCGACTGG
CTCGCGCCACGAGCACGAGTCTGGCGAGGAAAGGGCGGAGCTCTGGCCGTCGTCTTCCTCGCCGTCTTCCTCTCC
GCCTTCCCTCCTCTGGTGGGCTACTCGACGGCGGCGACGGTGGCCGGCTTCGTAGCCGGCTTCCCCGCCGGTTGG
CCGCTGGCCGCTTCCGCCGCCGTCGCCGGTAGCTTGGCCGCCTTTTTCGCTAGTCGCTCCGTCCTCGCTGCCTGT
GTCGAGAGGTTGGTCGGTAAGGATACGAGGTTTGTCGCTTTGGCCCAAGTCTTGAGGAGGGATGGCTTGTTGTGC
TTGACTGCCATTCGCTTTTGTCCCTTGCCGTTTAGTTTGAGTAATGGCTTTCTGGCTACGGTGCCGAGTGTGTCG
CCTTGGGCTTTTGCCCTCGCTACCGCCATTTCCAGGTTTGTCTTGTCCACCTCCCATCATCATCATCATCATCAT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCGAGGTTTTGTGACTTACACCTCGAATTGAATTACAAAGTCC
AAAGCTCCTCGTCCACGTCTTCATCGGAAGTCGTCTCGCCCTCCTCGCCGACGAAGGCGACACCATGTCTTCCAC
CGACAAAGCCATCAACTATCTAAGCATGCTCCTCAGCGCCCTCATCGGCCTCGTCGTCGGTCTCGTCGTCTACCG
TCGCACCATGGCCCGCGCCGCCCAACTAGCCCGTGAAGGGCTTCATCATCATCACCAACATCATCATCATCATCA
TCATCATCATCTGTCTTCTTCCGCCGCCGCCGCCGAGGTCGGCTACCACGATGCCGACGCTCCCCTGCTTGACCC
GGATGACGCCGCGGCTGTCATGCTCGATGACGACTTGCCGCTGTGGCCTGTCGATGACGCTGACGCCCGCCATGA
CGACGATGACCACCACGCTAAAGCTACAGAGCAGGTGGGACGCACCGGGCATCCGCCTCACGAGTTTTCTGTCTA
A

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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