Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6344
Gene name
Locationscaffold_55:24480..26117
Strand+
Gene length (bp)1637
Transcript length (bp)1512
Coding sequence length (bp)1509
Protein length (aa) 503

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 158 180 22
2 210 227 17
3 247 269 22
4 309 331 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6344
MALQPQPQPVGFADKKRPAALNLAPTRSASASSSSTNSLKLPRTPRFAEATSVHSPVGLTSPFSDPVKFQAAQSQ
PGDIGFGYINGTQARPESVAVPATPMSPLRSAIKTPGTPSRHFANTLSPTFREEDMLEKREQSTEKEQVKDVKMK
TRVRMAKFALRGVSFSCSLIILSMLSASFSIFNATKSLPTQSNMPAWAPNTSTNAWPQKLALAMACLSLFVCIVV
FAAYCRGGHKRAEKVNTYYQTFAVGWFITSLLLWVITAALFQHARDHGNNKDMWGWACVDNTRSDVFSQKVDYQL
VCRLQNWSLVCIVIEIVIEVISIALYSIVFYRYYTKRRLFKSMDLRDRARSDLYLAQLRSQSAPNTPGFCGPKSP
SLSHYAMSPRHPPAAYRNLSDIDEANPFTPGGHVAQPQSQFSAPLPGFKLQPPPTKAPSATPKMNQGAFAPNLVP
VIRTPSPPGETVAEHAPQAADEPTYEAVPIPGAYTGQAIKSPAPTANSFSQTR
Coding >Ophio5|6344
ATGGCTCTTCAACCACAACCTCAGCCCGTGGGCTTTGCCGACAAGAAGCGGCCTGCCGCTCTGAATCTGGCGCCT
ACCCGTTCTGCTTCTGCTTCATCCTCTTCCACAAACTCGCTCAAGCTCCCTCGTACGCCTCGTTTTGCCGAGGCA
ACTTCCGTTCACTCGCCTGTCGGCCTCACGTCTCCCTTCTCCGATCCTGTCAAGTTCCAAGCAGCCCAGTCGCAG
CCCGGCGATATCGGCTTCGGCTACATCAACGGCACCCAGGCCAGACCCGAGTCCGTCGCTGTCCCTGCCACCCCA
ATGTCACCGCTCAGGAGTGCCATCAAGACGCCGGGAACACCGAGCAGGCATTTCGCCAACACGCTCAGCCCGACC
TTCCGGGAAGAGGATATGCTCGAGAAGCGTGAGCAATCGACCGAGAAGGAGCAGGTCAAGGACGTTAAAATGAAG
ACGCGGGTTCGCATGGCCAAGTTTGCTCTTCGCGGCGTCAGCTTCAGCTGCTCTCTCATCATTCTCTCTATGCTC
TCTGCCTCCTTTTCCATCTTCAACGCTACCAAGAGTCTGCCCACTCAGAGCAACATGCCGGCATGGGCCCCCAAC
ACCTCCACCAATGCGTGGCCGCAGAAGCTCGCTCTAGCCATGGCTTGTCTTTCTCTTTTTGTCTGCATTGTTGTC
TTCGCCGCCTACTGTCGAGGTGGACACAAACGCGCGGAAAAGGTCAACACCTACTACCAGACCTTTGCCGTCGGC
TGGTTCATCACCAGCCTGCTCCTTTGGGTCATCACAGCCGCCCTTTTCCAGCACGCCAGGGATCACGGCAACAAC
AAGGACATGTGGGGATGGGCTTGCGTCGATAACACCCGCTCCGACGTCTTCAGCCAAAAGGTCGACTATCAGCTG
GTCTGTCGCCTGCAGAACTGGTCTCTGGTGTGCATTGTCATCGAGATCGTCATCGAAGTCATCTCCATCGCCCTC
TACAGTATCGTCTTCTACCGCTACTACACCAAGCGCCGCCTCTTCAAGTCCATGGATCTGCGGGACAGGGCTCGT
TCGGATCTCTACCTGGCCCAGCTCCGCTCCCAGTCGGCCCCCAACACCCCCGGCTTCTGCGGCCCCAAGTCGCCT
TCTCTGAGCCATTACGCCATGTCCCCTCGCCACCCGCCTGCCGCCTACCGCAACCTCTCCGACATTGACGAGGCC
AACCCATTCACTCCTGGCGGCCACGTCGCCCAGCCCCAGTCCCAGTTCTCGGCGCCCCTGCCCGGCTTCAAGCTG
CAACCACCCCCTACCAAGGCCCCGTCCGCCACGCCCAAGATGAACCAGGGTGCCTTCGCCCCCAACCTCGTCCCT
GTCATCAGGACGCCCTCCCCACCGGGCGAGACCGTCGCCGAGCACGCCCCTCAAGCCGCCGACGAGCCGACGTAC
GAGGCCGTTCCCATCCCCGGCGCCTACACGGGCCAGGCCATCAAGAGCCCTGCGCCGACGGCGAACTCGTTCTCT
CAGACCCGC
Transcript >Ophio5|6344
ATGGCTCTTCAACCACAACCTCAGCCCGTGGGCTTTGCCGACAAGAAGCGGCCTGCCGCTCTGAATCTGGCGCCT
ACCCGTTCTGCTTCTGCTTCATCCTCTTCCACAAACTCGCTCAAGCTCCCTCGTACGCCTCGTTTTGCCGAGGCA
ACTTCCGTTCACTCGCCTGTCGGCCTCACGTCTCCCTTCTCCGATCCTGTCAAGTTCCAAGCAGCCCAGTCGCAG
CCCGGCGATATCGGCTTCGGCTACATCAACGGCACCCAGGCCAGACCCGAGTCCGTCGCTGTCCCTGCCACCCCA
ATGTCACCGCTCAGGAGTGCCATCAAGACGCCGGGAACACCGAGCAGGCATTTCGCCAACACGCTCAGCCCGACC
TTCCGGGAAGAGGATATGCTCGAGAAGCGTGAGCAATCGACCGAGAAGGAGCAGGTCAAGGACGTTAAAATGAAG
ACGCGGGTTCGCATGGCCAAGTTTGCTCTTCGCGGCGTCAGCTTCAGCTGCTCTCTCATCATTCTCTCTATGCTC
TCTGCCTCCTTTTCCATCTTCAACGCTACCAAGAGTCTGCCCACTCAGAGCAACATGCCGGCATGGGCCCCCAAC
ACCTCCACCAATGCGTGGCCGCAGAAGCTCGCTCTAGCCATGGCTTGTCTTTCTCTTTTTGTCTGCATTGTTGTC
TTCGCCGCCTACTGTCGAGGTGGACACAAACGCGCGGAAAAGGTCAACACCTACTACCAGACCTTTGCCGTCGGC
TGGTTCATCACCAGCCTGCTCCTTTGGGTCATCACAGCCGCCCTTTTCCAGCACGCCAGGGATCACGGCAACAAC
AAGGACATGTGGGGATGGGCTTGCGTCGATAACACCCGCTCCGACGTCTTCAGCCAAAAGGTCGACTATCAGCTG
GTCTGTCGCCTGCAGAACTGGTCTCTGGTGTGCATTGTCATCGAGATCGTCATCGAAGTCATCTCCATCGCCCTC
TACAGTATCGTCTTCTACCGCTACTACACCAAGCGCCGCCTCTTCAAGTCCATGGATCTGCGGGACAGGGCTCGT
TCGGATCTCTACCTGGCCCAGCTCCGCTCCCAGTCGGCCCCCAACACCCCCGGCTTCTGCGGCCCCAAGTCGCCT
TCTCTGAGCCATTACGCCATGTCCCCTCGCCACCCGCCTGCCGCCTACCGCAACCTCTCCGACATTGACGAGGCC
AACCCATTCACTCCTGGCGGCCACGTCGCCCAGCCCCAGTCCCAGTTCTCGGCGCCCCTGCCCGGCTTCAAGCTG
CAACCACCCCCTACCAAGGCCCCGTCCGCCACGCCCAAGATGAACCAGGGTGCCTTCGCCCCCAACCTCGTCCCT
GTCATCAGGACGCCCTCCCCACCGGGCGAGACCGTCGCCGAGCACGCCCCTCAAGCCGCCGACGAGCCGACGTAC
GAGGCCGTTCCCATCCCCGGCGCCTACACGGGCCAGGCCATCAAGAGCCCTGCGCCGACGGCGAACTCGTTCTCT
CAGACCCGCTGA
Gene >Ophio5|6344
ATGGCTCTTCAACCACAACCTCAGCCCGTGGGCTTTGCCGACAAGAAGCGGCCTGCCGCTCTGAATCTGGCGCCT
ACCCGTTCTGCTTCTGCTTCATCCTCTTCCACAAACTCGCTCAAGCTCCCTCGTACGCCTCGTTTTGCCGAGGCA
ACTTCCGTTCACTCGCCTGTCGGCCTCACGTCTCCCTTCTCCGATCCTGTCAAGTTCCAAGCAGCCCAGTCGCAG
CCCGGCGATATCGGCTTCGGCTACATCAACGGCACCCAGGCCAGACCCGAGTCCGTCGCTGTCCCTGCCACCCCA
ATGTCACCGCTCAGGAGTGCCATCAAGACGCCGGGAACACCGAGCAGGCATTTCGCCAACACGCTCAGCCCGACC
TTCCGGGAAGAGGATATGCTCGAGAAGCGTGAGCAATCGACCGAGAAGGAGCAGGTCAAGGACGTTGTAGGTTCT
ACCAAGTTCCTCGTCTAGACAGACCAACCGCTGACGGGTTCTCCAGAAAATGAAGACGCGGGTTCGCATGGCCAA
GTTTGCTCTTCGCGGCGTCAGCTTCAGCTGCTCTCTCATCATTCTCTCTATGCTCTCTGCCTCCTTTTCCATCTT
CAACGCTACCAAGAGTCTGCCCACTCAGAGCAACATGCCGGCATGGGCCCCCAACACCTCCACCAATGCGTGGCC
GCAGAAGCTCGCTCTAGCCATGGCTTGTCTTTCTCTTTTTGTCTGCATTGTTGTCTTCGCCGCCTACTGTCGAGG
TGGACACAAACGCGCGGAAAAGGTCAACACCTACTACCAGACCTTTGCCGTCGGCTGGGTGAGTTTGTCCCGCCT
CCACTACCGGTTTTCGTCGCCCGAGCTCGTTGGCTGACCTATGGACGGGGTAGTTCATCACCAGCCTGCTCCTTT
GGGTCATCACAGCCGCCCTTTTCCAGCACGCCAGGGATCACGGCAACAACAAGGACATGTGGGGATGGGCTTGCG
TCGATAACACCCGCTCCGACGTCTTCAGCCAAAAGGTCGACTATCAGCTGGTCTGTCGCCTGCAGAACTGGTCTC
TGGTGTGCATTGTCATCGAGATCGTCATCGAAGTCATCTCCATCGCCCTCTACAGTATCGTCTTCTACCGCTACT
ACACCAAGCGCCGCCTCTTCAAGTCCATGGATCTGCGGGACAGGGCTCGTTCGGATCTCTACCTGGCCCAGCTCC
GCTCCCAGTCGGCCCCCAACACCCCCGGCTTCTGCGGCCCCAAGTCGCCTTCTCTGAGCCATTACGCCATGTCCC
CTCGCCACCCGCCTGCCGCCTACCGCAACCTCTCCGACATTGACGAGGCCAACCCATTCACTCCTGGCGGCCACG
TCGCCCAGCCCCAGTCCCAGTTCTCGGCGCCCCTGCCCGGCTTCAAGCTGCAACCACCCCCTACCAAGGCCCCGT
CCGCCACGCCCAAGATGAACCAGGGTGCCTTCGCCCCCAACCTCGTCCCTGTCATCAGGACGCCCTCCCCACCGG
GCGAGACCGTCGCCGAGCACGCCCCTCAAGCCGCCGACGAGCCGACGTACGAGGCCGTTCCCATCCCCGGCGCCT
ACACGGGCCAGGCCATCAAGAGCCCTGCGCCGACGGCGAACTCGTTCTCTCAGACCCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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