Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|6341
Gene name
Location	scaffold_55:16697..18773
Strand	-
Gene length (bp)	2076
Transcript length (bp)	2019
Coding sequence length (bp)	2016
Protein length (aa)	672

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05064	Nsp1_C	Nsp1-like C-terminal region	6.2E-39	449	554
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	6.2E+01	9	90
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	8.3E-05	94	181
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	4.7E-02	275	340
PF13634	Nucleoporin_FG	Nucleoporin FG repeat region	2.2E-04	345	422

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|G0SBQ3\|NSP1_CHATD	Nucleoporin NSP1 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=NSP1 PE=1 SV=1	3	670	2.0E-108
sp\|Q10168\|NSP1_SCHPO	Nucleoporin nsp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nsp1 PE=1 SV=1	331	644	8.0E-36
sp\|Q63850\|NUP62_MOUSE	Nuclear pore glycoprotein p62 OS=Mus musculus GN=Nup62 PE=1 SV=2	447	644	3.0E-34
sp\|P37198\|NUP62_HUMAN	Nuclear pore glycoprotein p62 OS=Homo sapiens GN=NUP62 PE=1 SV=3	464	644	3.0E-34
sp\|P17955\|NUP62_RAT	Nuclear pore glycoprotein p62 OS=Rattus norvegicus GN=Nup62 PE=1 SV=1	447	644	1.0E-33

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|G0SBQ3\|NSP1_CHATD	Nucleoporin NSP1 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) GN=NSP1 PE=1 SV=1	3	670	2.0E-108
sp\|Q10168\|NSP1_SCHPO	Nucleoporin nsp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nsp1 PE=1 SV=1	331	644	8.0E-36
sp\|Q63850\|NUP62_MOUSE	Nuclear pore glycoprotein p62 OS=Mus musculus GN=Nup62 PE=1 SV=2	447	644	3.0E-34
sp\|P37198\|NUP62_HUMAN	Nuclear pore glycoprotein p62 OS=Homo sapiens GN=NUP62 PE=1 SV=3	464	644	3.0E-34
sp\|P17955\|NUP62_RAT	Nuclear pore glycoprotein p62 OS=Rattus norvegicus GN=Nup62 PE=1 SV=1	447	644	1.0E-33
sp\|P14907\|NSP1_YEAST	Nucleoporin NSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NSP1 PE=1 SV=1	398	644	2.0E-31
sp\|Q8L7F7\|NUP62_ARATH	Nuclear pore complex protein NUP62 OS=Arabidopsis thaliana GN=NUP62 PE=1 SV=1	458	639	2.0E-22
sp\|Q9H1M0\|N62CL_HUMAN	Nucleoporin-62 C-terminal-like protein OS=Homo sapiens GN=NUP62CL PE=1 SV=3	457	547	3.0E-07
sp\|P48837\|NUP57_YEAST	Nucleoporin NUP57 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP57 PE=1 SV=1	241	418	1.0E-06

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 19	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|6341 MTSFNFVKPSSSSQPSDATSTPAPAAGSLFGAVTAPTKTVFCFSPLGGTANATGPASTGGFAPEQQQQQQQQQQG ADGNAQKPDATSSAPTLPFGASAPSTGTLFGANSSATPSSTGNPFGTMNPATSTPTTLTPKAGGLFGNLTGKPAT NLFGAAAGSATPGGGSILSQKNDQSSAFTAAASTPAKPMFPLASTTPAGAPPADSSQPAASSSLQVTAPASSQGL FSLAKAGSNAPGAGESVLGSNSAAPPAGGLLGNLGGNLAPGSSPAPAAEGSATPKLGSSLFGGMTTAPAAAGATT IGSGLFGSATATSTASTTGATKAPSGGMFGNTSTPAATTSAATPATSSTSAGLFGNAQPTASASASNTASSLFGA PAAASASQPTSAGGPTVAAGGLFGAKPATGGTSQTAGGLFGAKTATEGVDKAQDGQPAKPAAQNGTAGALGASTS GPTSQMPRLKNKTMEDIITRWASDLAKYQKDFKEQATVVSTWDRNLVNNGEKIQKLYLDTFEAERASHEIERQLA AVESQQDELEAWLDRYEAEVQDMFVKQVGPGEQLAGPDQERERTYKLAEKLTQQLDEKSRDLSKMVKDINDISGS LTKGAKVEDPLSQIVRVLNGHLTQLQWIDAHAAALQAKVAAAQKSSVALNSHYAGVENDAAESFYRSYMGRR
Coding	>Ophio5\|6341 ATGACCTCCTTCAACTTCGTGAAGCCAAGCTCGTCGAGCCAACCGTCGGACGCGACTTCGACTCCGGCACCCGCT GCTGGCAGTCTCTTCGGCGCTGTTACGGCCCCTACCAAAACCGTCTTCTGCTTCAGCCCGCTAGGAGGCACAGCC AACGCCACGGGCCCCGCCAGCACAGGAGGCTTTGCCCCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGG GCGGATGGAAACGCGCAGAAGCCGGATGCCACTTCTTCGGCTCCGACGCTGCCTTTCGGCGCAAGCGCGCCCTCG ACTGGGACCTTGTTTGGGGCCAACAGCTCTGCTACGCCGTCGTCCACCGGCAATCCCTTTGGCACCATGAATCCA GCCACTTCTACGCCGACAACCTTGACTCCAAAGGCTGGAGGACTTTTCGGCAACTTGACCGGCAAGCCGGCGACG AACCTGTTTGGCGCTGCTGCTGGCAGCGCAACCCCGGGGGGCGGCTCCATCCTTTCGCAGAAGAATGATCAATCC AGTGCATTCACGGCGGCAGCGTCCACTCCTGCGAAGCCCATGTTTCCTCTTGCCTCCACTACTCCGGCGGGGGCC CCTCCAGCAGATTCCTCACAGCCTGCCGCCTCCTCGTCATTGCAAGTTACGGCGCCCGCGTCTTCTCAGGGATTA TTCAGCCTCGCGAAGGCAGGTAGCAACGCCCCTGGTGCTGGGGAGAGCGTGTTGGGCTCAAACTCCGCAGCACCT CCCGCTGGGGGCCTGCTCGGGAACTTGGGGGGTAATTTGGCGCCGGGCTCGTCTCCCGCGCCGGCGGCGGAGGGC TCTGCAACTCCCAAACTGGGCAGCTCCCTGTTCGGTGGGATGACGACAGCACCCGCTGCGGCTGGAGCCACGACA ATCGGGAGTGGACTTTTCGGCAGCGCAACGGCCACGTCTACCGCCTCGACAACTGGCGCCACCAAGGCTCCCAGC GGTGGCATGTTCGGCAACACGTCGACCCCTGCAGCTACGACATCCGCTGCCACACCGGCTACTTCATCGACTTCA GCCGGCTTATTTGGGAACGCTCAGCCAACCGCCTCCGCCTCCGCGTCAAATACGGCCTCTTCGCTCTTTGGAGCT CCAGCCGCTGCCAGCGCTTCACAGCCGACGTCGGCCGGGGGACCGACAGTGGCCGCAGGCGGGCTTTTTGGGGCC AAGCCGGCCACTGGGGGCACATCTCAGACCGCAGGCGGACTGTTTGGGGCCAAGACGGCCACTGAAGGCGTGGAC AAGGCTCAGGATGGCCAGCCAGCCAAGCCCGCAGCGCAGAACGGGACTGCGGGCGCGCTGGGCGCCTCGACAAGC GGCCCAACCTCGCAGATGCCCCGGCTGAAGAACAAGACCATGGAGGACATCATCACCCGATGGGCCTCGGATCTC GCCAAATACCAAAAGGATTTCAAGGAGCAGGCCACGGTGGTGTCGACTTGGGATCGAAACCTAGTCAATAATGGA GAGAAGATTCAGAAGTTATACCTCGACACTTTCGAGGCCGAGAGAGCGAGCCACGAGATCGAACGACAGCTGGCG GCGGTGGAAAGCCAGCAGGACGAGCTCGAGGCTTGGCTGGACCGGTACGAAGCAGAAGTGCAAGACATGTTCGTC AAGCAAGTCGGCCCGGGCGAGCAGCTGGCCGGTCCAGACCAGGAGCGAGAGCGGACCTACAAGCTGGCCGAGAAG CTCACGCAGCAGCTCGACGAAAAGTCGCGAGACCTTTCCAAGATGGTCAAGGACATTAACGACATCTCGGGAAGC CTGACCAAGGGAGCCAAGGTTGAGGACCCATTGAGCCAGATTGTACGCGTACTCAACGGCCACCTCACCCAGCTG CAGTGGATCGACGCCCACGCCGCGGCGCTGCAGGCGAAGGTGGCGGCGGCACAGAAGTCGAGCGTGGCTCTGAAC AGCCATTACGCCGGGGTGGAAAACGACGCCGCAGAGAGCTTCTACCGGTCGTACATGGGGCGACGG
Transcript	>Ophio5\|6341 ATGACCTCCTTCAACTTCGTGAAGCCAAGCTCGTCGAGCCAACCGTCGGACGCGACTTCGACTCCGGCACCCGCT GCTGGCAGTCTCTTCGGCGCTGTTACGGCCCCTACCAAAACCGTCTTCTGCTTCAGCCCGCTAGGAGGCACAGCC AACGCCACGGGCCCCGCCAGCACAGGAGGCTTTGCCCCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGG GCGGATGGAAACGCGCAGAAGCCGGATGCCACTTCTTCGGCTCCGACGCTGCCTTTCGGCGCAAGCGCGCCCTCG ACTGGGACCTTGTTTGGGGCCAACAGCTCTGCTACGCCGTCGTCCACCGGCAATCCCTTTGGCACCATGAATCCA GCCACTTCTACGCCGACAACCTTGACTCCAAAGGCTGGAGGACTTTTCGGCAACTTGACCGGCAAGCCGGCGACG AACCTGTTTGGCGCTGCTGCTGGCAGCGCAACCCCGGGGGGCGGCTCCATCCTTTCGCAGAAGAATGATCAATCC AGTGCATTCACGGCGGCAGCGTCCACTCCTGCGAAGCCCATGTTTCCTCTTGCCTCCACTACTCCGGCGGGGGCC CCTCCAGCAGATTCCTCACAGCCTGCCGCCTCCTCGTCATTGCAAGTTACGGCGCCCGCGTCTTCTCAGGGATTA TTCAGCCTCGCGAAGGCAGGTAGCAACGCCCCTGGTGCTGGGGAGAGCGTGTTGGGCTCAAACTCCGCAGCACCT CCCGCTGGGGGCCTGCTCGGGAACTTGGGGGGTAATTTGGCGCCGGGCTCGTCTCCCGCGCCGGCGGCGGAGGGC TCTGCAACTCCCAAACTGGGCAGCTCCCTGTTCGGTGGGATGACGACAGCACCCGCTGCGGCTGGAGCCACGACA ATCGGGAGTGGACTTTTCGGCAGCGCAACGGCCACGTCTACCGCCTCGACAACTGGCGCCACCAAGGCTCCCAGC GGTGGCATGTTCGGCAACACGTCGACCCCTGCAGCTACGACATCCGCTGCCACACCGGCTACTTCATCGACTTCA GCCGGCTTATTTGGGAACGCTCAGCCAACCGCCTCCGCCTCCGCGTCAAATACGGCCTCTTCGCTCTTTGGAGCT CCAGCCGCTGCCAGCGCTTCACAGCCGACGTCGGCCGGGGGACCGACAGTGGCCGCAGGCGGGCTTTTTGGGGCC AAGCCGGCCACTGGGGGCACATCTCAGACCGCAGGCGGACTGTTTGGGGCCAAGACGGCCACTGAAGGCGTGGAC AAGGCTCAGGATGGCCAGCCAGCCAAGCCCGCAGCGCAGAACGGGACTGCGGGCGCGCTGGGCGCCTCGACAAGC GGCCCAACCTCGCAGATGCCCCGGCTGAAGAACAAGACCATGGAGGACATCATCACCCGATGGGCCTCGGATCTC GCCAAATACCAAAAGGATTTCAAGGAGCAGGCCACGGTGGTGTCGACTTGGGATCGAAACCTAGTCAATAATGGA GAGAAGATTCAGAAGTTATACCTCGACACTTTCGAGGCCGAGAGAGCGAGCCACGAGATCGAACGACAGCTGGCG GCGGTGGAAAGCCAGCAGGACGAGCTCGAGGCTTGGCTGGACCGGTACGAAGCAGAAGTGCAAGACATGTTCGTC AAGCAAGTCGGCCCGGGCGAGCAGCTGGCCGGTCCAGACCAGGAGCGAGAGCGGACCTACAAGCTGGCCGAGAAG CTCACGCAGCAGCTCGACGAAAAGTCGCGAGACCTTTCCAAGATGGTCAAGGACATTAACGACATCTCGGGAAGC CTGACCAAGGGAGCCAAGGTTGAGGACCCATTGAGCCAGATTGTACGCGTACTCAACGGCCACCTCACCCAGCTG CAGTGGATCGACGCCCACGCCGCGGCGCTGCAGGCGAAGGTGGCGGCGGCACAGAAGTCGAGCGTGGCTCTGAAC AGCCATTACGCCGGGGTGGAAAACGACGCCGCAGAGAGCTTCTACCGGTCGTACATGGGGCGACGGTGA
Gene	>Ophio5\|6341 ATGACCTCCTTCAACTTCGTGAAGCCAAGCTCGTCGAGCCAACCGTCGGACGCGACTTCGACTCCGGCACCCGCT GCTGGCAGTCTCTTCGGCGCTGTTACGGCCCCTACCAAAACCGTCTTCTGCTTCAGCCCGCTAGGAGGCACAGCC AACGCCACGGGCCCCGCCAGCACAGGAGGCTTTGCCCCCGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGG GCGGATGGAAACGCGCAGAAGCCGGATGCCACTTCTTCGGCTCCGACGCTGCCTTTCGGCGCAAGCGCGCCCTCG ACTGGGACCTTGTTTGGGGCCAACAGCTCTGCTACGCCGTCGTCCACCGGCAATCCCTTTGGCACCATGAATCCA GCCACTTCTACGCCGACAACCTTGACTCCAAAGGCTGGAGGACTTTTCGGCAACTTGACCGGCAAGCCGGCGACG AACCTGTTTGGCGCTGCTGCTGGCAGCGCAACCCCGGGGGGCGGCTCCATCCTTTCGCAGAAGAATGATCAATCC AGTGCATTCACGGCGGCAGCGTCCACTCCTGCGAAGCCCATGTTTCCTCTTGCCTCCACTACTCCGGCGGGGGCC CCTCCAGCAGATTCCTCACAGCCTGCCGCCTCCTCGTCATTGCAAGTTACGGCGCCCGCGTCTTCTCAGGGATTA TTCAGCCTCGCGAAGGCAGGTAGCAACGCCCCTGGTGCTGGGGAGAGCGTGTTGGGCTCAAACTCCGCAGCACCT CCCGCTGGGGGCCTGCTCGGGAACTTGGGGGGTAATTTGGCGCCGGGCTCGTCTCCCGCGCCGGCGGCGGAGGGC TCTGCAACTCCCAAACTGGGCAGCTCCCTGTTCGGTGGGATGACGACAGCACCCGCTGCGGCTGGAGCCACGACA ATCGGGAGTGGACTTTTCGGCAGCGCAACGGCCACGTCTACCGCCTCGACAACTGGCGCCACCAAGGCTCCCAGC GGTGGCATGTTCGGCAACACGTCGACCCCTGCAGCTACGACATCCGCTGCCACACCGGCTACTTCATCGACTTCA GCCGGCTTATTTGGGAACGCTCAGCCAACCGCCTCCGCCTCCGCGTCAAATACGGCCTCTTCGCTCTTTGGAGCT CCAGCCGCTGCCAGCGCTTCACAGCCGACGTCGGCCGGGGGACCGACAGTGGCCGCAGGCGGGCTTTTTGGGGCC AAGCCGGCCACTGGGGGCACATCTCAGACCGCAGGCGGACTGTTTGGGGCCAAGACGGCCACTGAAGGCGTGGAC AAGGCTCAGGATGGCCAGCCAGCCAAGCCCGCAGCGCAGAACGGGACTGCGGGCGCGCTGGGCGCCTCGACAAGC GGCCCAACCTCGCAGATGCCCCGGCTGAAGAACAAGACCATGGAGGACATCATCACCCGATGGGCCTCGGATCTC GCCAAATACCAAAAGGATTTCAAGGAGCAGGCCACGGTGGTGTCGACTTGGGATCGAAACCTAGTCAATAATGGA GAGAAGATTCAGAAGTTATACCTCGACACTTTCGAGGCCGAGAGAGCGAGCCACGAGATCGAACGACAGCTGGCG GCGGTGGAAAGCCAGCAGGACGAGCTCGAGGCTTGGCTGGACCGGTACGAAGCAGAAGTGCAAGACATGTTCGTC AAGCAAGTCGGCCCGGGCGAGCAGCTGGCCGGTCCAGACCAGGAGCGAGAGCGGACCTACAAGCTGGCCGAGAAG CTCACGCAGCAGCTCGACGAAAAGTCGCGAGACCTTTCCAAGATGGTCAAGGACATTAACGACATCTCGGGAAGC CTGACCAAGGGAGCCAAGGTTGAGGACCCAGTAAGCATGGCCGCCTAGTGAAGCTCCGTCCGCGCCGAAGCTGAC TTGTGACGACAGTTGAGCCAGATTGTACGCGTACTCAACGGCCACCTCACCCAGCTGCAGTGGATCGACGCCCAC GCCGCGGCGCTGCAGGCGAAGGTGGCGGCGGCACAGAAGTCGAGCGTGGCTCTGAACAGCCATTACGCCGGGGTG GAAAACGACGCCGCAGAGAGCTTCTACCGGTCGTACATGGGGCGACGGTGA

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