Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|6311
Gene name
Location	scaffold_546:1728..3018
Strand	+
Gene length (bp)	1290
Transcript length (bp)	1290
Coding sequence length (bp)	1287
Protein length (aa)	429

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF14388	DUF4419	Domain of unknown function (DUF4419)	6.9E-93	93	392

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q5UQ60\|YL662_MIMIV	Uncharacterized protein L662 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L662 PE=4 SV=1	101	309	2.0E-15

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|6311 MRNTLLLALSGGLLSLTAAQGQEGITIWIDEDVPILPLQTDHVVHSAEELFNQSCPEEVSRYNSYHPQLLRTSYD TVHNASFENGEVFFSSSSFIRGAVEAWGQHQHLFLRPDEVWFEILTQLNAYMFKNAEKVRDIFVNHQGQENIRVA VWNDESAVDNLVTGFAYELRHRVKTPWLADWVKPGFSTTTPEDELTANVLMMGLLQQFFSYTGVLLCGLPSVTLL GTREDWEALSGKLEHLKDFGEEPTQYAEVLRPIMDGFLRSWDEPDSETTKDFWSKIVLGGKNYLCSGQTLVSGWI TGFSFWNKSGNLILTAAQRQNAERGTQLGNVKYVSRDVNLLPVSYAKVPVRMAKHPRLPPDSDVYLLAGNIGVHR TASPEGVFAEPLSGWYMYGPVDTQFEIRENSGNGEELRGISRSIDQCSLPALAS
Coding	>Ophio5\|6311 ATGCGCAACACGCTTCTGCTTGCCCTCTCCGGGGGGCTTCTCTCCCTCACCGCGGCCCAAGGCCAAGAGGGTATC ACCATCTGGATTGATGAGGACGTACCCATCCTTCCGCTCCAGACAGACCACGTCGTTCATTCTGCCGAGGAGCTT TTCAACCAGAGTTGCCCCGAAGAAGTGTCTCGCTACAACTCCTACCACCCTCAGCTGCTCAGAACGTCTTATGAT ACCGTCCACAACGCCTCATTCGAAAACGGCGAGGTTTTCTTCTCCTCGTCTAGCTTCATTCGCGGCGCTGTTGAG GCCTGGGGTCAGCATCAGCACTTATTCTTGCGTCCCGACGAGGTCTGGTTCGAGATCCTGACCCAGTTGAACGCC TACATGTTCAAAAACGCCGAAAAGGTTCGCGACATCTTTGTCAACCATCAGGGCCAGGAAAACATACGCGTCGCC GTCTGGAACGATGAGTCGGCTGTCGATAATTTGGTTACCGGCTTCGCCTACGAACTCCGACACAGAGTCAAGACG CCATGGCTCGCCGATTGGGTCAAGCCTGGCTTCAGTACCACCACTCCCGAGGACGAACTCACTGCCAATGTGCTC ATGATGGGTCTCTTGCAACAGTTTTTCAGTTACACTGGCGTCCTACTCTGCGGCCTTCCGTCTGTCACCCTGCTC GGCACCAGGGAGGATTGGGAGGCCCTGTCGGGCAAGCTGGAGCATCTCAAGGATTTTGGTGAAGAGCCGACGCAA TATGCCGAGGTGCTGCGGCCCATCATGGACGGTTTCCTTCGCTCTTGGGACGAGCCGGACTCCGAGACTACCAAG GATTTCTGGTCAAAGATCGTTCTTGGCGGCAAAAACTATCTTTGTAGCGGACAGACTTTGGTGTCCGGCTGGATC ACCGGCTTTTCCTTCTGGAACAAATCGGGCAACCTCATCTTGACCGCGGCCCAGCGCCAAAATGCGGAACGCGGA ACACAGCTCGGCAATGTCAAGTATGTCTCTCGGGACGTCAATCTGCTACCCGTCAGCTATGCCAAGGTTCCCGTC CGTATGGCTAAACATCCGAGGCTACCTCCGGACTCGGATGTTTACCTACTGGCCGGCAATATTGGCGTTCACAGG ACCGCGAGCCCCGAAGGCGTCTTTGCAGAACCACTCAGCGGCTGGTACATGTATGGCCCCGTGGATACTCAGTTT GAGATCAGGGAGAATTCTGGGAATGGCGAAGAGCTTCGTGGTATATCGAGAAGCATCGACCAGTGTTCACTGCCT GCACTCGCATCG
Transcript	>Ophio5\|6311 ATGCGCAACACGCTTCTGCTTGCCCTCTCCGGGGGGCTTCTCTCCCTCACCGCGGCCCAAGGCCAAGAGGGTATC ACCATCTGGATTGATGAGGACGTACCCATCCTTCCGCTCCAGACAGACCACGTCGTTCATTCTGCCGAGGAGCTT TTCAACCAGAGTTGCCCCGAAGAAGTGTCTCGCTACAACTCCTACCACCCTCAGCTGCTCAGAACGTCTTATGAT ACCGTCCACAACGCCTCATTCGAAAACGGCGAGGTTTTCTTCTCCTCGTCTAGCTTCATTCGCGGCGCTGTTGAG GCCTGGGGTCAGCATCAGCACTTATTCTTGCGTCCCGACGAGGTCTGGTTCGAGATCCTGACCCAGTTGAACGCC TACATGTTCAAAAACGCCGAAAAGGTTCGCGACATCTTTGTCAACCATCAGGGCCAGGAAAACATACGCGTCGCC GTCTGGAACGATGAGTCGGCTGTCGATAATTTGGTTACCGGCTTCGCCTACGAACTCCGACACAGAGTCAAGACG CCATGGCTCGCCGATTGGGTCAAGCCTGGCTTCAGTACCACCACTCCCGAGGACGAACTCACTGCCAATGTGCTC ATGATGGGTCTCTTGCAACAGTTTTTCAGTTACACTGGCGTCCTACTCTGCGGCCTTCCGTCTGTCACCCTGCTC GGCACCAGGGAGGATTGGGAGGCCCTGTCGGGCAAGCTGGAGCATCTCAAGGATTTTGGTGAAGAGCCGACGCAA TATGCCGAGGTGCTGCGGCCCATCATGGACGGTTTCCTTCGCTCTTGGGACGAGCCGGACTCCGAGACTACCAAG GATTTCTGGTCAAAGATCGTTCTTGGCGGCAAAAACTATCTTTGTAGCGGACAGACTTTGGTGTCCGGCTGGATC ACCGGCTTTTCCTTCTGGAACAAATCGGGCAACCTCATCTTGACCGCGGCCCAGCGCCAAAATGCGGAACGCGGA ACACAGCTCGGCAATGTCAAGTATGTCTCTCGGGACGTCAATCTGCTACCCGTCAGCTATGCCAAGGTTCCCGTC CGTATGGCTAAACATCCGAGGCTACCTCCGGACTCGGATGTTTACCTACTGGCCGGCAATATTGGCGTTCACAGG ACCGCGAGCCCCGAAGGCGTCTTTGCAGAACCACTCAGCGGCTGGTACATGTATGGCCCCGTGGATACTCAGTTT GAGATCAGGGAGAATTCTGGGAATGGCGAAGAGCTTCGTGGTATATCGAGAAGCATCGACCAGTGTTCACTGCCT GCACTCGCATCGTAG
Gene	>Ophio5\|6311 ATGCGCAACACGCTTCTGCTTGCCCTCTCCGGGGGGCTTCTCTCCCTCACCGCGGCCCAAGGCCAAGAGGGTATC ACCATCTGGATTGATGAGGACGTACCCATCCTTCCGCTCCAGACAGACCACGTCGTTCATTCTGCCGAGGAGCTT TTCAACCAGAGTTGCCCCGAAGAAGTGTCTCGCTACAACTCCTACCACCCTCAGCTGCTCAGAACGTCTTATGAT ACCGTCCACAACGCCTCATTCGAAAACGGCGAGGTTTTCTTCTCCTCGTCTAGCTTCATTCGCGGCGCTGTTGAG GCCTGGGGTCAGCATCAGCACTTATTCTTGCGTCCCGACGAGGTCTGGTTCGAGATCCTGACCCAGTTGAACGCC TACATGTTCAAAAACGCCGAAAAGGTTCGCGACATCTTTGTCAACCATCAGGGCCAGGAAAACATACGCGTCGCC GTCTGGAACGATGAGTCGGCTGTCGATAATTTGGTTACCGGCTTCGCCTACGAACTCCGACACAGAGTCAAGACG CCATGGCTCGCCGATTGGGTCAAGCCTGGCTTCAGTACCACCACTCCCGAGGACGAACTCACTGCCAATGTGCTC ATGATGGGTCTCTTGCAACAGTTTTTCAGTTACACTGGCGTCCTACTCTGCGGCCTTCCGTCTGTCACCCTGCTC GGCACCAGGGAGGATTGGGAGGCCCTGTCGGGCAAGCTGGAGCATCTCAAGGATTTTGGTGAAGAGCCGACGCAA TATGCCGAGGTGCTGCGGCCCATCATGGACGGTTTCCTTCGCTCTTGGGACGAGCCGGACTCCGAGACTACCAAG GATTTCTGGTCAAAGATCGTTCTTGGCGGCAAAAACTATCTTTGTAGCGGACAGACTTTGGTGTCCGGCTGGATC ACCGGCTTTTCCTTCTGGAACAAATCGGGCAACCTCATCTTGACCGCGGCCCAGCGCCAAAATGCGGAACGCGGA ACACAGCTCGGCAATGTCAAGTATGTCTCTCGGGACGTCAATCTGCTACCCGTCAGCTATGCCAAGGTTCCCGTC CGTATGGCTAAACATCCGAGGCTACCTCCGGACTCGGATGTTTACCTACTGGCCGGCAATATTGGCGTTCACAGG ACCGCGAGCCCCGAAGGCGTCTTTGCAGAACCACTCAGCGGCTGGTACATGTATGGCCCCGTGGATACTCAGTTT GAGATCAGGGAGAATTCTGGGAATGGCGAAGAGCTTCGTGGTATATCGAGAAGCATCGACCAGTGTTCACTGCCT GCACTCGCATCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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