Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6307
Gene name
Locationscaffold_545:4206..4626
Strand+
Gene length (bp)420
Transcript length (bp)420
Coding sequence length (bp)417
Protein length (aa) 139

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19026 HYPK_UBA HYPK UBA domain 5.7E-16 92 132

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 62 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6307
MADERPPNHTKGDSAAGPDADDEVPTAAKSAEDRKAASALASLDANHDDDAAAASAKNLDRDAVDKAIKRLGGAA
AVPGAKTAAAAPAAKNVKVDAADVALLVDELELSRPKATELLKSHDGDAVKAIRAYLQPSREQA
Coding >Ophio5|6307
ATGGCAGACGAGCGACCCCCTAATCACACAAAAGGCGACTCCGCCGCCGGCCCTGACGCCGACGACGAAGTGCCC
ACCGCAGCCAAGTCGGCCGAGGACCGCAAAGCCGCCTCGGCCCTGGCAAGCCTCGACGCCAACCACGACGACGAC
GCCGCTGCCGCTTCAGCCAAAAACTTGGACCGTGACGCCGTCGACAAGGCCATCAAGAGACTCGGCGGTGCCGCC
GCCGTCCCCGGCGCTAAGACGGCCGCTGCGGCTCCGGCTGCCAAGAACGTCAAGGTCGATGCCGCCGATGTTGCG
CTTCTCGTCGACGAGCTCGAGCTTTCGCGTCCCAAGGCCACTGAACTTCTCAAGAGCCACGATGGCGATGCTGTC
AAGGCGATACGGGCCTACCTTCAGCCGTCAAGGGAACAGGCT
Transcript >Ophio5|6307
ATGGCAGACGAGCGACCCCCTAATCACACAAAAGGCGACTCCGCCGCCGGCCCTGACGCCGACGACGAAGTGCCC
ACCGCAGCCAAGTCGGCCGAGGACCGCAAAGCCGCCTCGGCCCTGGCAAGCCTCGACGCCAACCACGACGACGAC
GCCGCTGCCGCTTCAGCCAAAAACTTGGACCGTGACGCCGTCGACAAGGCCATCAAGAGACTCGGCGGTGCCGCC
GCCGTCCCCGGCGCTAAGACGGCCGCTGCGGCTCCGGCTGCCAAGAACGTCAAGGTCGATGCCGCCGATGTTGCG
CTTCTCGTCGACGAGCTCGAGCTTTCGCGTCCCAAGGCCACTGAACTTCTCAAGAGCCACGATGGCGATGCTGTC
AAGGCGATACGGGCCTACCTTCAGCCGTCAAGGGAACAGGCTTGA
Gene >Ophio5|6307
ATGGCAGACGAGCGACCCCCTAATCACACAAAAGGCGACTCCGCCGCCGGCCCTGACGCCGACGACGAAGTGCCC
ACCGCAGCCAAGTCGGCCGAGGACCGCAAAGCCGCCTCGGCCCTGGCAAGCCTCGACGCCAACCACGACGACGAC
GCCGCTGCCGCTTCAGCCAAAAACTTGGACCGTGACGCCGTCGACAAGGCCATCAAGAGACTCGGCGGTGCCGCC
GCCGTCCCCGGCGCTAAGACGGCCGCTGCGGCTCCGGCTGCCAAGAACGTCAAGGTCGATGCCGCCGATGTTGCG
CTTCTCGTCGACGAGCTCGAGCTTTCGCGTCCCAAGGCCACTGAACTTCTCAAGAGCCACGATGGCGATGCTGTC
AAGGCGATACGGGCCTACCTTCAGCCGTCAAGGGAACAGGCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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