Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6304
Gene name
Locationscaffold_544:11973..12367
Strand-
Gene length (bp)394
Transcript length (bp)339
Coding sequence length (bp)336
Protein length (aa) 112

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P52751|MPG1_MAGO7 Hydrophobin-like protein MPG1 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=MPG1 PE=3 SV=1 44 110 8.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6304
MHSLKFLVLAIAGALAAPSIDQANSYEATFDKSGLVRRGATYGQVCGQNRIAHCCKDVEKKKGRTGLIPIDLGRC
SRIQVLSDLVHGSCNGQVCCSGNMRGLINLQCTDVQL
Coding >Ophio5|6304
ATGCACTCCCTCAAGTTCCTCGTCCTCGCCATCGCCGGCGCCCTCGCTGCCCCCTCCATCGACCAGGCTAACAGC
TACGAGGCAACCTTCGACAAGTCGGGCCTCGTCCGTCGGGGTGCCACCTACGGCCAAGTCTGCGGCCAGAACCGG
ATCGCCCACTGCTGCAAGGACGTCGAGAAGAAGAAAGGCCGGACCGGTCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATCCAGGTCCTTTCCGACCTCGTCCATGGCAGCTGCAATGGCCAGGTCTGCTGCTCCGGCAACATGAGG
GGCCTCATCAACCTTCAGTGCACCGATGTCCAGCTT
Transcript >Ophio5|6304
ATGCACTCCCTCAAGTTCCTCGTCCTCGCCATCGCCGGCGCCCTCGCTGCCCCCTCCATCGACCAGGCTAACAGC
TACGAGGCAACCTTCGACAAGTCGGGCCTCGTCCGTCGGGGTGCCACCTACGGCCAAGTCTGCGGCCAGAACCGG
ATCGCCCACTGCTGCAAGGACGTCGAGAAGAAGAAAGGCCGGACCGGTCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATCCAGGTCCTTTCCGACCTCGTCCATGGCAGCTGCAATGGCCAGGTCTGCTGCTCCGGCAACATGAGG
GGCCTCATCAACCTTCAGTGCACCGATGTCCAGCTTTAA
Gene >Ophio5|6304
ATGCACTCCCTCAAGTTCCTCGTCCTCGCCATCGCCGGCGCCCTCGCTGCCCCCTCCATCGACCAGGCTAACAGC
TACGAGGCAACCTTCGACAAGTCGGGCCTCGTCCGTCGGGGTGCCACCTACGGCCAAGTCTGCGGCCAGAACCGG
ATCGCCCACTGCTGCAAGGACGTCGAGAAGAAGAAAGGCCGGACCGGTCTGATCCCCATCGATCTCGGCCGCTGC
AGCCGGATCCAGGTCCTTTCCGACCTCGTCCATGGCAGCTGCAATGGCCAGGTCTGCTGCTCCGGCAACATGAGG
GTAAAAGGTCCTTTCTTGACGATTGCATCTCAGCTCTGCTAACAAACTCTTCCAGGGCCTCATCAACCTTCAGTG
CACCGATGTCCAGCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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