Protein ID | Ophio5|6295 |
Gene name | |
Location | scaffold_543:1974..3994 |
Strand | + |
Gene length (bp) | 2020 |
Transcript length (bp) | 1734 |
Coding sequence length (bp) | 1731 |
Protein length (aa) | 577 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14737 | DUF4470 | Domain of unknown function (DUF4470) | 1.7E-24 | 95 | 198 |
PF01753 | zf-MYND | MYND finger | 1.2E-09 | 20 | 54 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.716 | 0.2758 | 0.4107 | 0.0306 | 0.2971 | 0.0113 | 0.0628 | 0.2576 | 0.2094 | 0.0996 |
Orthofinder run ID | 4 |
Orthogroup | 826 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6295 MAEIPLLPAACAHWTRQGFWCKNPGTKTCSNCKLVVYCGVSCQRAHWPEHRKQCKSAMAKQSWRPAWDCEFRRPA WAGDAAADTRHNPLGGRKHLWGNTPAIDMLQLEKNEGLDYQKDLSLLLAGESSGDLRHVVKTLSDVPETIHQQLH VVVNDGDFDVVARNVILLLLAFDGFRDEASSVASIIEAIIHVWYSAFIPQTVFSRLQQRVKPLIDDVCSRLASEN PDLVIRKSWEASNGASLNLVLRQEDWFRLRQFVNLPDGLTKEEASRIRAAVTLAPERADYRDRWNYKEATPFMRI AKQRFREDGLLLPFGHPRLGFDIPNPTLFQSKTWTLHDQADPTGGWTISAVGQRSWPAPGDWYGKLVAHLTMLLD KFITKLGKNFVCFQLFHTDARMLPLFLGARKYCRIEVSDMFDGGGFVGIHQTLSTLSPYLQHPKVNPHATLITVF INAVKEMSLLENPAGEVPNVNILSRLLPRPSMLSLAFNDSADLTRLWDARFLVTNVERLFQSYMAVCRFDTISAE VRVEMKADNTIVEKWPTRFNFRPGQNGNVDEFRLRLGSIFTHLERYVEWKRR |
Coding | >Ophio5|6295 ATGGCTGAAATCCCTCTACTCCCGGCCGCATGTGCTCACTGGACAAGACAAGGATTCTGGTGCAAGAACCCAGGC ACCAAGACCTGCAGCAATTGCAAACTCGTCGTCTACTGCGGAGTAAGCTGCCAAAGAGCCCACTGGCCCGAGCAC CGGAAGCAATGCAAGTCGGCCATGGCAAAGCAGTCTTGGCGCCCGGCCTGGGACTGCGAGTTCCGCAGACCGGCT TGGGCGGGTGATGCTGCTGCCGACACAAGGCACAACCCCCTTGGCGGCAGAAAGCATCTATGGGGCAATACTCCC GCCATCGACATGCTGCAACTGGAGAAGAATGAGGGGCTTGATTACCAGAAAGACCTCTCTTTACTACTCGCTGGC GAGTCGTCGGGAGATTTGCGTCACGTCGTCAAGACCCTCTCCGATGTGCCAGAAACGATCCATCAGCAACTTCAT GTCGTCGTCAACGACGGAGACTTTGATGTGGTGGCCAGGAACGTCATCTTGCTACTCCTTGCTTTCGATGGCTTC CGCGACGAAGCATCATCTGTTGCGAGCATCATAGAAGCCATCATTCACGTCTGGTACTCGGCCTTTATCCCTCAG ACGGTCTTCTCTCGACTGCAGCAACGCGTCAAGCCGTTGATCGACGACGTATGCAGCAGACTTGCGAGCGAGAAT CCAGACTTGGTCATAAGGAAATCCTGGGAGGCTTCCAACGGAGCAAGTCTGAACCTTGTGCTGAGGCAGGAAGAC TGGTTCCGACTCCGACAGTTCGTAAACCTACCCGACGGCCTAACGAAGGAAGAGGCAAGTCGCATACGCGCTGCT GTGACCCTGGCTCCGGAGAGGGCAGATTACCGCGATCGATGGAACTACAAGGAGGCAACCCCTTTTATGCGCATC GCCAAACAGCGATTTCGAGAAGACGGTCTCCTGTTGCCGTTTGGCCACCCACGACTCGGATTCGATATACCAAAT CCGACCCTCTTCCAGTCCAAGACCTGGACTCTCCACGACCAGGCCGATCCAACCGGCGGCTGGACGATTTCTGCC GTGGGACAGCGTTCTTGGCCTGCTCCCGGAGATTGGTACGGCAAACTCGTCGCTCACTTGACCATGTTGTTGGAC AAGTTCATCACCAAGCTGGGCAAGAACTTTGTCTGCTTTCAACTCTTCCACACGGACGCACGGATGCTACCGCTG TTCCTCGGGGCAAGGAAATACTGTCGAATCGAGGTATCCGACATGTTCGACGGAGGAGGCTTCGTCGGCATCCAC CAAACTCTGTCCACCTTGTCCCCTTATCTACAGCATCCAAAGGTGAATCCTCACGCAACCCTCATCACCGTCTTT ATCAACGCCGTCAAGGAGATGTCGTTACTGGAGAATCCTGCAGGGGAGGTGCCCAACGTGAATATCTTGTCTCGC TTGCTTCCCCGTCCCTCGATGCTTTCCTTGGCCTTTAATGATAGCGCCGATCTTACCAGGCTTTGGGATGCGCGA TTTCTCGTCACCAATGTGGAGAGGCTGTTCCAAAGCTATATGGCAGTGTGTCGGTTTGATACCATCTCCGCCGAG GTGAGAGTTGAGATGAAAGCGGACAACACTATTGTCGAGAAGTGGCCTACTCGCTTCAACTTCCGTCCCGGTCAG AATGGAAATGTCGACGAGTTTCGATTGCGTCTCGGTTCCATATTCACCCATCTGGAGCGTTATGTGGAGTGGAAG AGACGA |
Transcript | >Ophio5|6295 ATGGCTGAAATCCCTCTACTCCCGGCCGCATGTGCTCACTGGACAAGACAAGGATTCTGGTGCAAGAACCCAGGC ACCAAGACCTGCAGCAATTGCAAACTCGTCGTCTACTGCGGAGTAAGCTGCCAAAGAGCCCACTGGCCCGAGCAC CGGAAGCAATGCAAGTCGGCCATGGCAAAGCAGTCTTGGCGCCCGGCCTGGGACTGCGAGTTCCGCAGACCGGCT TGGGCGGGTGATGCTGCTGCCGACACAAGGCACAACCCCCTTGGCGGCAGAAAGCATCTATGGGGCAATACTCCC GCCATCGACATGCTGCAACTGGAGAAGAATGAGGGGCTTGATTACCAGAAAGACCTCTCTTTACTACTCGCTGGC GAGTCGTCGGGAGATTTGCGTCACGTCGTCAAGACCCTCTCCGATGTGCCAGAAACGATCCATCAGCAACTTCAT GTCGTCGTCAACGACGGAGACTTTGATGTGGTGGCCAGGAACGTCATCTTGCTACTCCTTGCTTTCGATGGCTTC CGCGACGAAGCATCATCTGTTGCGAGCATCATAGAAGCCATCATTCACGTCTGGTACTCGGCCTTTATCCCTCAG ACGGTCTTCTCTCGACTGCAGCAACGCGTCAAGCCGTTGATCGACGACGTATGCAGCAGACTTGCGAGCGAGAAT CCAGACTTGGTCATAAGGAAATCCTGGGAGGCTTCCAACGGAGCAAGTCTGAACCTTGTGCTGAGGCAGGAAGAC TGGTTCCGACTCCGACAGTTCGTAAACCTACCCGACGGCCTAACGAAGGAAGAGGCAAGTCGCATACGCGCTGCT GTGACCCTGGCTCCGGAGAGGGCAGATTACCGCGATCGATGGAACTACAAGGAGGCAACCCCTTTTATGCGCATC GCCAAACAGCGATTTCGAGAAGACGGTCTCCTGTTGCCGTTTGGCCACCCACGACTCGGATTCGATATACCAAAT CCGACCCTCTTCCAGTCCAAGACCTGGACTCTCCACGACCAGGCCGATCCAACCGGCGGCTGGACGATTTCTGCC GTGGGACAGCGTTCTTGGCCTGCTCCCGGAGATTGGTACGGCAAACTCGTCGCTCACTTGACCATGTTGTTGGAC AAGTTCATCACCAAGCTGGGCAAGAACTTTGTCTGCTTTCAACTCTTCCACACGGACGCACGGATGCTACCGCTG TTCCTCGGGGCAAGGAAATACTGTCGAATCGAGGTATCCGACATGTTCGACGGAGGAGGCTTCGTCGGCATCCAC CAAACTCTGTCCACCTTGTCCCCTTATCTACAGCATCCAAAGGTGAATCCTCACGCAACCCTCATCACCGTCTTT ATCAACGCCGTCAAGGAGATGTCGTTACTGGAGAATCCTGCAGGGGAGGTGCCCAACGTGAATATCTTGTCTCGC TTGCTTCCCCGTCCCTCGATGCTTTCCTTGGCCTTTAATGATAGCGCCGATCTTACCAGGCTTTGGGATGCGCGA TTTCTCGTCACCAATGTGGAGAGGCTGTTCCAAAGCTATATGGCAGTGTGTCGGTTTGATACCATCTCCGCCGAG GTGAGAGTTGAGATGAAAGCGGACAACACTATTGTCGAGAAGTGGCCTACTCGCTTCAACTTCCGTCCCGGTCAG AATGGAAATGTCGACGAGTTTCGATTGCGTCTCGGTTCCATATTCACCCATCTGGAGCGTTATGTGGAGTGGAAG AGACGATGA |
Gene | >Ophio5|6295 ATGGCTGAAATCCCTCTACTCCCGGCCGCATGTGCTCACTGGACAAGACAAGGATTCTGGTGCAAGAACCCAGGC ACCAAGACCTGCAGCAATTGCAAACTCGTCGTCGTGAGTGCACACCGGATGGTAAGGAGCAGCAGATACTCATCA TCATAACTCTAGTACTGCGGAGTAAGCTGCCAAAGAGCCCACTGGCCCGAGCACCGGAAGCAATGCAAGTCGGCC ATGGCAAAGCAGTCTTGGCGCCCGGCCTGGGACTGCGAGTTCCGCAGACCGGCTTGGGCGGGTGATGCTGCTGCC GACACAAGGCACAACCCCCTTGGCGGCAGAAAGCATCTATGGGGCAATACTCCCGCCATCGACATGCTGCAACTG GAGAAGAATGAGGGGCTTGATTACCAGAAAGACCTCTCTTTACTACTCGCTGGCGAGTGTTTGGTCCAGGGCCCC CTTGGGGAAGCCGTGGCGATGCTGACTTGTACCAGCGTCGGGAGATTTGCGTCACGTCGTCAAGACCCTCTCCGA TGTGCCAGAAACGATCCATCAGCAACTTCATGTCGTCGTCAACGACGGAGACTTTGATGTGGTGGCCAGGAACGT CATCTTGCTACTCCTTGCTTTCGATGGCTTCCGCGACGAAGCATCATCTGTTGCGAGCATCATAGAAGCCATCAT TCACGTCTGGTACTCGGCCTTTATCCCTCAGACGGTCTTCTCTCGACTGCAGCAACGCGTCAAGCCGTTGATCGA CGACGTATGCAGCAGACTTGCGAGCGAGAATCCAGACTTGGTCATAAGGAAATCCTGGGAGGCTTCCAACGGAGC AAGTCTGAACCTTGTGCTGAGGCAGGAAGACTGGTTCCGACTCCGACAGTTCGTAAACCTACCCGACGGCCTAAC GAAGGAAGAGGCAAGTCGCATACGCGCTGCTGTGACCCTGGCTCCGGAGAGGGCAGATTACCGCGATCGATGGAA CTACAAGGAGGCAACCCCTTTTATGCGCATCGCCAAACAGCGATTTCGAGAAGACGGTCTCCTGTTGCCGTTTGG CCACCCACGACTCGGATTCGATATACCAAATCCGTGCGTGTTGGGAGGGGAAAAAAAAAGAGAAGCTTTTTTACC AAGGCTGACACTGACTGGAATTCAGGACCCTCTTCCAGTCCAAGACCTGGACTCTCCACGACCAGGCCGATCCAA CCGGCGGCTGGACGATTTCTGCCGTGGGACAGCGTTCTTGGCCTGCTCCCGGAGATTGGTACGGCAAACTCGTCG CTCACTTGACCATGTTGTTGGACAAGTTCATCACCAAGCTGGGCAAGAACTTTGTCTGCTTTCAACTCTTCCACA CGGACGCACGGATGCTACCGCTGTTCCTCGGGGCAAGGAAATACTGTCGAATCGAGGTAAGGCCAGTACACGTCC TCTTTGCATTCTGCGGCTAAACCCGTGGTCAGGTATCCGACATGTTCGACGGAGGAGGCTTCGTCGGCATCCACC AAACTCTGTCCACCTTGTCCCCTTATCTACAGCATCCAAAGGTGAATCCTCACGCAACCCTCATCACCGTCTTTA TCAACGCCGTCAAGGAGATGTCGTTACTGGAGAATCCTGCAGGGGAGGTGCCCAACGTGAATATCTTGTCTCGCT TGCTTCCCCGTCCCTCGATGCTTTCCTTGGCCTTTAATGATAGCGCCGATCTTACCAGGCTTTGGGATGCGCGAT TTCTCGTCACCAATGTGGAGAGGCTGTTCCAAAGGTAGGGAGGCAGATGGCATGAAAATCTCCGTGTCAGGCCCA AAGCTGACAGACAGCCTCAAGCTATATGGCAGTGTGTCGGTTTGATACCATCTCCGCCGAGGTGAGAGTTGAGAT GAAAGCGGACAACACTATTGTCGAGAAGTGGCCTACTCGCTTCAACTTCCGTCCCGGTCAGAATGGAAATGTCGA CGAGTTTCGATTGCGTCTCGGTTCCATATTCACCCATCTGGAGCGTTATGTGGAGTGGAAGAGACGATGA |