Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|629
Gene name
Locationscaffold_117:8521..9056
Strand-
Gene length (bp)535
Transcript length (bp)477
Coding sequence length (bp)474
Protein length (aa) 158

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular 0.0412 0.1197 0.9237 0.5168 0.0828 0.022 0.2359 0.0597 0.0884 0.0067

SignalP

SignalP signal predicted Location Score
Yes 1 - 19 0.999317

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup16160
Change Orthofinder run
Species Protein ID
Ophiocordyceps kimflemingae Ophio5|629 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|629
MLRLAPLSLLLALGAAQQRQATSALNAAASAPGELQSPVGAISIPGNIKATLSSALASATDRAGSGLSSASEVLD
ANSSESTTTSTSTSTSSGTSSTTSGTSESTTTSTATVTPSSTSRSTSRTSSSTRSSSNPAAMPTAFANGVAVAAA
VAGFAAAL
Coding >Ophio5|629
ATGCTCCGCCTCGCCCCCCTCAGCCTCCTCCTCGCCCTCGGCGCCGCCCAGCAGCGGCAAGCTACCTCGGCTCTC
AACGCCGCTGCCTCTGCTCCCGGCGAGCTCCAGTCTCCCGTCGGCGCCATCAGCATCCCCGGCAACATCAAGGCC
ACCCTCTCATCCGCTCTCGCCTCTGCCACTGACAGAGCCGGCAGCGGCCTGAGCTCCGCATCCGAAGTCTTGGAC
GCAAACTCCAGCGAGTCTACGACCACGTCCACCTCCACGTCCACCTCCTCCGGAACCTCCTCCACAACCTCCGGC
ACCTCCGAGTCGACCACCACCTCCACAGCCACCGTCACTCCCTCCTCCACCTCCAGATCCACCTCTCGGACCTCC
TCCTCCACCCGGTCCTCTTCTAATCCCGCTGCCATGCCCACCGCTTTCGCCAACGGCGTCGCTGTCGCAGCCGCC
GTCGCCGGCTTTGCCGCTGCACTC
Transcript >Ophio5|629
ATGCTCCGCCTCGCCCCCCTCAGCCTCCTCCTCGCCCTCGGCGCCGCCCAGCAGCGGCAAGCTACCTCGGCTCTC
AACGCCGCTGCCTCTGCTCCCGGCGAGCTCCAGTCTCCCGTCGGCGCCATCAGCATCCCCGGCAACATCAAGGCC
ACCCTCTCATCCGCTCTCGCCTCTGCCACTGACAGAGCCGGCAGCGGCCTGAGCTCCGCATCCGAAGTCTTGGAC
GCAAACTCCAGCGAGTCTACGACCACGTCCACCTCCACGTCCACCTCCTCCGGAACCTCCTCCACAACCTCCGGC
ACCTCCGAGTCGACCACCACCTCCACAGCCACCGTCACTCCCTCCTCCACCTCCAGATCCACCTCTCGGACCTCC
TCCTCCACCCGGTCCTCTTCTAATCCCGCTGCCATGCCCACCGCTTTCGCCAACGGCGTCGCTGTCGCAGCCGCC
GTCGCCGGCTTTGCCGCTGCACTCTGA
Gene >Ophio5|629
ATGCTCCGCCTCGCCCCCCTCAGCCTCCTCCTCGCCCTCGGCGCCGCCCAGCAGCGGCAAGCTACCTCGGCTCTC
AACGCCGCTGCCTCTGCTCCCGGCGAGCTCCAGTCTCCCGTCGGCGCCATCAGCATCCCCGGCAACATCAAGGCC
ACCCTCTCATCCGCTCTCGCCTCTGCCACTGACAGGTTCGTCTTTTCCACCCTACCCCTCTGTCCTATATCCTAT
GCTGACTCTCCCGTCTAGAGCCGGCAGCGGCCTGAGCTCCGCATCCGAAGTCTTGGACGCAAACTCCAGCGAGTC
TACGACCACGTCCACCTCCACGTCCACCTCCTCCGGAACCTCCTCCACAACCTCCGGCACCTCCGAGTCGACCAC
CACCTCCACAGCCACCGTCACTCCCTCCTCCACCTCCAGATCCACCTCTCGGACCTCCTCCTCCACCCGGTCCTC
TTCTAATCCCGCTGCCATGCCCACCGCTTTCGCCAACGGCGTCGCTGTCGCAGCCGCCGTCGCCGGCTTTGCCGC
TGCACTCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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