Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6276
Gene name
Locationscaffold_54:53038..54986
Strand-
Gene length (bp)1948
Transcript length (bp)1611
Coding sequence length (bp)1608
Protein length (aa) 536

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06814 Lung_7-TM_R Lung seven transmembrane receptor 1.2E-69 145 434

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTM1 PE=1 SV=2 27 477 4.0E-83
sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PTM1 PE=3 SV=1 27 477 4.0E-83
sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2 3 492 3.0E-65
sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1 SV=1 22 475 5.0E-63
sp|Q9Y7Y9|YOD2_SCHPO Uncharacterized membrane protein C18A7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC18A7.02c PE=3 SV=1 1 433 3.0E-32
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Swissprot ID Swissprot Description Start End E-value
sp|P32857|PTM1_YEAST Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTM1 PE=1 SV=2 27 477 4.0E-83
sp|A6ZZS6|PTM1_YEAS7 Membrane protein PTM1 OS=Saccharomyces cerevisiae (strain YJM789) GN=PTM1 PE=3 SV=1 27 477 4.0E-83
sp|O13989|YEG7_SCHPO Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5.07c PE=3 SV=2 3 492 3.0E-65
sp|P38745|YHB7_YEAST Uncharacterized membrane protein YHL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHL017W PE=1 SV=1 22 475 5.0E-63
sp|Q9Y7Y9|YOD2_SCHPO Uncharacterized membrane protein C18A7.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC18A7.02c PE=3 SV=1 1 433 3.0E-32
sp|Q28EW0|TM87A_XENTR Transmembrane protein 87A OS=Xenopus tropicalis GN=tmem87a PE=2 SV=1 147 482 4.0E-27
sp|Q8BKU8|TM87B_MOUSE Transmembrane protein 87B OS=Mus musculus GN=Tmem87b PE=2 SV=1 173 447 3.0E-22
sp|Q96K49|TM87B_HUMAN Transmembrane protein 87B OS=Homo sapiens GN=TMEM87B PE=1 SV=1 173 447 2.0E-21
sp|Q8NBN3|TM87A_HUMAN Transmembrane protein 87A OS=Homo sapiens GN=TMEM87A PE=1 SV=3 163 439 2.0E-18
sp|Q8BXN9|TM87A_MOUSE Transmembrane protein 87A OS=Mus musculus GN=Tmem87a PE=1 SV=1 163 439 2.0E-18
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 184 206 22
2 218 237 19
3 252 274 22
4 295 314 19
5 324 346 22
6 367 389 22
7 404 426 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6276
MKLLSTLCPLGLLLWTAAALEVAMDQTEKNRQYCSGMYSRTTWGGPVDPFIEIKFLNSTIPEGSDPIASLIVFEW
ADKNLVGVPDPDMPGLQLELCHNESAKQGRCNSSAVGEYILSPNATAKSKAIILSKAVHLKEAAPIRYAIKKTGY
YCVVTEVFTAESYSLVTEFRNAYGELPATQIPKLPFYGGMTILYALVCVFWGFLYYQHRHDILAVQNYITAILIF
LVIEMLMTWGFYDYQNRIGNNAVSKVLLIVVGVLNAARNSFSFFLLLIVCMGYGVVKPTLGRTMIHVRWLAAAHF
VFGLVYAITSLLISPESAGPFVLLIVLPLAGTLTAFYVWTLNSLNYTLKDLRERKQHAKEAMYKKLWWAILVSIL
VIFGFFFFNSFTFASVNDPDFVPFHWKTRWFVLDGWLNIVYFGDVVWIAYVWRPTANNRRFAMSDEIAQDDDGNF
EIGDIGIPEDFEDEEEAHGGHHQRHQPPVTGITSAGPAADSQQRGQIRGPGRESLEAETIFAVGEDGDKLSDVGS
EEEDATLVQAK
Coding >Ophio5|6276
ATGAAGCTTCTTTCGACCCTCTGTCCGCTGGGCTTGCTCCTCTGGACAGCTGCCGCGCTCGAGGTGGCCATGGAC
CAGACCGAGAAAAACCGCCAATACTGTTCTGGCATGTACAGTCGAACGACTTGGGGGGGCCCCGTCGACCCCTTC
ATCGAAATCAAGTTTCTCAATTCCACCATCCCCGAGGGCAGCGATCCGATAGCGAGCCTCATCGTCTTCGAGTGG
GCCGATAAGAACTTGGTCGGAGTTCCCGATCCAGACATGCCCGGGCTGCAACTTGAGCTCTGCCACAATGAATCT
GCCAAACAAGGCCGCTGCAACTCCTCTGCCGTTGGCGAGTACATCCTCTCGCCGAACGCCACCGCAAAGTCCAAG
GCCATCATCCTCTCAAAGGCCGTTCACCTGAAAGAAGCCGCCCCTATCCGCTACGCCATCAAGAAGACGGGTTAC
TACTGCGTCGTCACCGAGGTCTTTACCGCCGAGAGCTACAGTCTCGTGACCGAGTTCCGCAATGCGTACGGGGAG
CTGCCCGCCACCCAGATCCCGAAGCTGCCCTTTTACGGCGGCATGACGATTCTCTACGCCCTCGTCTGCGTGTTC
TGGGGCTTCCTCTATTACCAGCATCGCCATGATATCTTGGCGGTTCAAAACTACATCACTGCCATTCTCATCTTC
TTGGTCATCGAAATGCTCATGACCTGGGGCTTCTATGATTACCAAAATCGTATCGGCAATAACGCGGTATCCAAG
GTTCTACTCATCGTTGTCGGAGTCCTCAACGCGGCCCGCAACTCCTTTTCCTTTTTCCTGCTGCTCATCGTCTGT
ATGGGCTATGGCGTGGTCAAGCCGACGCTCGGCCGCACCATGATACACGTACGCTGGCTCGCGGCCGCCCACTTT
GTCTTTGGACTCGTCTACGCCATAACCAGTCTTTTGATTTCTCCAGAGAGTGCCGGGCCTTTTGTCCTACTAATC
GTGCTTCCCCTGGCCGGAACGTTGACGGCCTTTTATGTCTGGACGCTCAATTCGCTCAACTACACTCTCAAGGAC
CTTAGGGAGCGCAAGCAGCACGCAAAAGAGGCCATGTACAAGAAGCTATGGTGGGCTATACTTGTCAGCATCCTC
GTCATCTTCGGTTTCTTCTTCTTCAACAGCTTTACCTTTGCCTCGGTTAACGATCCCGACTTCGTTCCGTTTCAC
TGGAAGACTAGGTGGTTCGTGCTGGACGGATGGCTGAATATCGTCTACTTTGGCGACGTGGTATGGATCGCGTAC
GTCTGGCGGCCGACGGCCAACAACCGTCGCTTTGCCATGAGTGACGAGATTGCGCAAGACGACGACGGAAACTTT
GAAATTGGCGACATTGGCATTCCCGAGGACTTTGAGGACGAGGAAGAGGCTCACGGCGGCCACCATCAGAGGCAC
CAACCGCCTGTGACGGGCATCACCAGCGCCGGACCGGCCGCTGACAGCCAACAACGGGGCCAGATAAGGGGCCCT
GGGCGAGAGTCCCTGGAAGCAGAGACCATTTTTGCCGTCGGTGAGGATGGTGACAAGCTTTCCGACGTTGGAAGC
GAGGAAGAGGATGCTACGCTCGTGCAGGCAAAG
Transcript >Ophio5|6276
ATGAAGCTTCTTTCGACCCTCTGTCCGCTGGGCTTGCTCCTCTGGACAGCTGCCGCGCTCGAGGTGGCCATGGAC
CAGACCGAGAAAAACCGCCAATACTGTTCTGGCATGTACAGTCGAACGACTTGGGGGGGCCCCGTCGACCCCTTC
ATCGAAATCAAGTTTCTCAATTCCACCATCCCCGAGGGCAGCGATCCGATAGCGAGCCTCATCGTCTTCGAGTGG
GCCGATAAGAACTTGGTCGGAGTTCCCGATCCAGACATGCCCGGGCTGCAACTTGAGCTCTGCCACAATGAATCT
GCCAAACAAGGCCGCTGCAACTCCTCTGCCGTTGGCGAGTACATCCTCTCGCCGAACGCCACCGCAAAGTCCAAG
GCCATCATCCTCTCAAAGGCCGTTCACCTGAAAGAAGCCGCCCCTATCCGCTACGCCATCAAGAAGACGGGTTAC
TACTGCGTCGTCACCGAGGTCTTTACCGCCGAGAGCTACAGTCTCGTGACCGAGTTCCGCAATGCGTACGGGGAG
CTGCCCGCCACCCAGATCCCGAAGCTGCCCTTTTACGGCGGCATGACGATTCTCTACGCCCTCGTCTGCGTGTTC
TGGGGCTTCCTCTATTACCAGCATCGCCATGATATCTTGGCGGTTCAAAACTACATCACTGCCATTCTCATCTTC
TTGGTCATCGAAATGCTCATGACCTGGGGCTTCTATGATTACCAAAATCGTATCGGCAATAACGCGGTATCCAAG
GTTCTACTCATCGTTGTCGGAGTCCTCAACGCGGCCCGCAACTCCTTTTCCTTTTTCCTGCTGCTCATCGTCTGT
ATGGGCTATGGCGTGGTCAAGCCGACGCTCGGCCGCACCATGATACACGTACGCTGGCTCGCGGCCGCCCACTTT
GTCTTTGGACTCGTCTACGCCATAACCAGTCTTTTGATTTCTCCAGAGAGTGCCGGGCCTTTTGTCCTACTAATC
GTGCTTCCCCTGGCCGGAACGTTGACGGCCTTTTATGTCTGGACGCTCAATTCGCTCAACTACACTCTCAAGGAC
CTTAGGGAGCGCAAGCAGCACGCAAAAGAGGCCATGTACAAGAAGCTATGGTGGGCTATACTTGTCAGCATCCTC
GTCATCTTCGGTTTCTTCTTCTTCAACAGCTTTACCTTTGCCTCGGTTAACGATCCCGACTTCGTTCCGTTTCAC
TGGAAGACTAGGTGGTTCGTGCTGGACGGATGGCTGAATATCGTCTACTTTGGCGACGTGGTATGGATCGCGTAC
GTCTGGCGGCCGACGGCCAACAACCGTCGCTTTGCCATGAGTGACGAGATTGCGCAAGACGACGACGGAAACTTT
GAAATTGGCGACATTGGCATTCCCGAGGACTTTGAGGACGAGGAAGAGGCTCACGGCGGCCACCATCAGAGGCAC
CAACCGCCTGTGACGGGCATCACCAGCGCCGGACCGGCCGCTGACAGCCAACAACGGGGCCAGATAAGGGGCCCT
GGGCGAGAGTCCCTGGAAGCAGAGACCATTTTTGCCGTCGGTGAGGATGGTGACAAGCTTTCCGACGTTGGAAGC
GAGGAAGAGGATGCTACGCTCGTGCAGGCAAAGTGA
Gene >Ophio5|6276
ATGAAGCTTCTTTCGACCCTCTGTCCGCTGGGCTTGCTCCTCTGGACAGCTGCCGCGCTCGAGGTGGCCATGGTA
CACGCGCCCTCCCTTGGCGCTCGGGAGAGCTTCAGGTTGACAGGCCCTGCTCTTTTATAGGACCAGACCGAGAAA
AACCGCCAATACTGTTCTGGTTCGCAACTTGCCTCCCTCACCTTGTCTCGGCCGCTGACTGCCTCGCAGGCATGT
ACAGTCGAACGACTTGGGGGGGCCCCGTCGACCCCTTCATCGAAATCAAGTTTCTCAATTCCACCATCCCCGAGG
GCAGCGATCCGATAGCGAGCCTCATCGTCTTCGAGTGGGCCGATAAGAACTTGGTCGGAGTTCCCGATCCAGACA
TGCCCGGGCTGGTGAGACGTGGTGCTTTCCGACGGTCGATGACAAACGGCGCTGCTCACACTCGTCGCATTAGCA
ACTTGAGCTCTGCCACAATGAATCTGCCAAACAAGGCCGCTGCAACTCCTCTGCCGTTGGCGAGTACATCCTCTC
GCCGAACGCCACCGCAAAGTCCAAGGCCATCATCCTCTCAAAGGCCGTTCACCTGAAAGAAGCCGCCCCTATCCG
CTACGCCATCAAGAAGACGGGTTACTACTGCGTCGTCACCGAGGTCTTTACCGCCGAGAGCTACAGTCTCGTGAC
CGAGTTCCGCAATGCGTACGGGGAGCTGCCCGCCACCCAGATCCCGAAGCTGCCCTTTTACGGCGGCATGACGAT
TCTCTACGCCCTCGTCTGCGTGTTCTGGGGCTTCCTCTATTACCAGCATCGCCATGATATCTGTGAGTCGAGCTC
TCTCATGGCGAGCTCATCAACCGAAGCCTGCTAAGACCAGCGGAAGTGGCGGTTCAAAACTACATCACTGCCATT
CTCATCTTCTTGGTCATCGAAATGCTCATGACCTGGGGCTTCTATGGTCGGTTGTTCCCCTCCCGCTACTGGTGG
CCGAACCTACGCTGAACCGATAGATTACCAAAATCGTATCGGCAATAACGCGGTATCCAAGGTTCTACTCATCGT
TGTCGGAGTCCTCAACGCGGCCCGCAACTCCTTTTCCTTTTTCCTGCTGCTCATCGTCTGTATGGGCTATGGCGT
GGTCAAGCCGACGCTCGGCCGCACCATGATACACGTACGCTGGCTCGCGGCCGCCCACTTTGTCTTTGGACTCGT
CTACGCCATAACCAGTCTTTTGATTTCTCCAGAGAGTGCCGGCACGTTTCCCCATCGCCGTGCCCTACGTCGGAT
GCTGACTGGTCGGAAAGGGCCTTTTGTCCTACTAATCGTGCTTCCCCTGGCCGGAACGTTGACGGCCTTTTATGT
CTGGACGCTCAATTCGCTCAACTACACTCTCAAGGACCTTAGGGAGCGCAAGCAGCACGCAAAAGAGGCCATGTA
CAAGAAGCTATGGTGGGCTATACTTGTCAGCATCCTCGTCATCTTCGGTTTCTTCTTCTTCAACAGCTTTACCTT
TGCCTCGGTTAACGATCCCGACTTCGTTCCGTTTCACTGGAAGACTAGGTGGTTCGTGCTGGACGGATGGCTGAA
TATCGTCTACTTTGGCGACGTGGTATGGATCGCGTACGTCTGGCGGCCGACGGCCAACAACCGTCGCTTTGCCAT
GAGTGACGAGATTGCGCAAGACGACGACGGAAACTTTGAAATTGGCGACATTGGCATTCCCGAGGACTTTGAGGA
CGAGGAAGAGGCTCACGGCGGCCACCATCAGAGGCACCAACCGCCTGTGACGGGCATCACCAGCGCCGGACCGGC
CGCTGACAGCCAACAACGGGGCCAGATAAGGGGCCCTGGGCGAGAGTCCCTGGAAGCAGAGACCATTTTTGCCGT
CGGTGAGGATGGTGACAAGCTTTCCGACGTTGGAAGCGAGGAAGAGGATGCTACGCTCGTGCAGGCAAAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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