Protein ID | Ophio5|6272 |
Gene name | |
Location | scaffold_54:44308..46701 |
Strand | + |
Gene length (bp) | 2393 |
Transcript length (bp) | 2337 |
Coding sequence length (bp) | 2334 |
Protein length (aa) | 778 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF05026 | DCP2 | Dcp2, box A domain | 4.9E-31 | 10 | 93 |
PF00293 | NUDIX | NUDIX domain | 1.5E-15 | 98 | 212 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13828|DCP2_SCHPO | mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 | 1 | 265 | 5.0E-83 |
sp|Q8GW31|DCP2_ARATH | mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 | 12 | 248 | 2.0E-59 |
sp|Q75BK1|DCP2_ASHGO | mRNA-decapping enzyme subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP2 PE=3 SV=1 | 8 | 254 | 3.0E-57 |
sp|Q9CYC6|DCP2_MOUSE | m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 | 12 | 249 | 5.0E-55 |
sp|Q8IU60|DCP2_HUMAN | m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 | 12 | 249 | 6.0E-55 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O13828|DCP2_SCHPO | mRNA decapping complex subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dcp2 PE=1 SV=1 | 1 | 265 | 5.0E-83 |
sp|Q8GW31|DCP2_ARATH | mRNA-decapping enzyme subunit 2 OS=Arabidopsis thaliana GN=DCP2 PE=1 SV=1 | 12 | 248 | 2.0E-59 |
sp|Q75BK1|DCP2_ASHGO | mRNA-decapping enzyme subunit 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DCP2 PE=3 SV=1 | 8 | 254 | 3.0E-57 |
sp|Q9CYC6|DCP2_MOUSE | m7GpppN-mRNA hydrolase OS=Mus musculus GN=Dcp2 PE=1 SV=2 | 12 | 249 | 5.0E-55 |
sp|Q8IU60|DCP2_HUMAN | m7GpppN-mRNA hydrolase OS=Homo sapiens GN=DCP2 PE=1 SV=2 | 12 | 249 | 6.0E-55 |
sp|Q5REQ8|DCP2_PONAB | m7GpppN-mRNA hydrolase OS=Pongo abelii GN=DCP2 PE=2 SV=1 | 12 | 249 | 5.0E-54 |
sp|A6ZRW5|DCP2_YEAS7 | mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain YJM789) GN=DCP2 PE=3 SV=1 | 12 | 267 | 3.0E-52 |
sp|P53550|DCP2_YEAST | mRNA-decapping enzyme subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DCP2 PE=1 SV=1 | 12 | 267 | 4.0E-52 |
sp|O62255|DCP2_CAEEL | mRNA-decapping enzyme 2 OS=Caenorhabditis elegans GN=dcap-2 PE=2 SV=4 | 10 | 265 | 1.0E-46 |
sp|P0C997|DIPP_ASFWA | mRNA-decapping protein g5R OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-112 PE=3 SV=1 | 104 | 215 | 2.0E-06 |
sp|P32092|DIPP_ASFB7 | mRNA-decapping protein g5R OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-102 PE=1 SV=1 | 104 | 215 | 2.0E-06 |
sp|P0C996|DIPP_ASFP4 | mRNA-decapping protein g5R OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-114 PE=3 SV=1 | 104 | 215 | 2.0E-06 |
sp|Q65217|DIPP_ASFM2 | mRNA-decapping protein g5R OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-110 PE=3 SV=1 | 104 | 215 | 3.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003723 | RNA binding | Yes |
GO:0003676 | nucleic acid binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
GO:1901363 | heterocyclic compound binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6272 MARTQMLLEDWLDDLCVRFIINLPHEDLSSVARICFQVEEAQWFYEDFIRPLDPTLPSMSLRTFCLRIFQHCPLL ASFSVENHTEAFEEFLQYKTRVPVRGAIMLNQAMDSVVLVKGWKKGASWSFPRGKINKDEDDLDCAVREVYEETG LDIRAAGLVPEKKPKSIEISMREQQLRLYVFRDIPMDTDFQPRTRKEISKIQWYRLSELPTFSKKGDKSAQHNDD GAGNQNRKFYMVAPFLVPLKKWIASQRKMDQKRAASANQTNLAPQYSAADEAFSIDDETWATDQRGAPDGLSSAE TLSGATQELQRLLKMQRHMEASLQPQHQNKGSALLSILQAGNNSRPQDVTKLPQTPVDLSGAEPPPPPRNPHHHT NQHHPVSRDTHAQEPPPSFKLGSNQKTVTLNVMSKQDYNPPKPPPHAAGMGQQQHPVRRDRSLVNTQPLPSQILQ DVLSRSASHGSPASHQTSRVQMQSGQTGGPVHSPLPPTVHVGQGSRTAQLDGHSMALMKVMKRDVTPTVPYTEAS SHNKSQASVPKHQPAATMPPYGSVSLPRQLPHLTDSSPRHASSSALPRIGASLSTDDHRSALLGIFKRTELDAGP PKQQVQDDRNLAGHATSPGLLSTQPRLSQNGLSEHGAQGNRMLYVHGPGQTGITKQKPLQPTMVLQRGQSLDDDN SRARLPLQGLPERLSGAQDAKAVQSSGAVSRRAGGSDEKKMQLLSLFGRQQNATLGSGKGEGQSGSVASTSPLRE REPQTPMSPADQSFVLEYLQSVTNNAGR |
Coding | >Ophio5|6272 ATGGCCAGAACCCAGATGCTGCTAGAGGATTGGCTGGACGATCTATGCGTCCGCTTCATCATCAATCTTCCCCAC GAAGACTTATCATCGGTCGCCCGGATCTGTTTCCAGGTCGAGGAGGCTCAATGGTTTTACGAAGACTTCATTCGA CCGCTTGATCCAACCCTCCCGTCCATGTCGCTCCGAACGTTTTGCCTGAGAATCTTTCAACATTGTCCGCTTCTG GCCTCATTCTCCGTCGAGAACCATACAGAGGCGTTCGAGGAATTCTTGCAATACAAAACGCGAGTACCCGTCCGC GGCGCCATTATGCTCAACCAAGCAATGGACTCGGTGGTCCTAGTCAAAGGCTGGAAAAAGGGAGCCAGCTGGAGT TTCCCCCGCGGTAAGATTAACAAAGATGAGGATGACCTCGATTGTGCTGTCCGCGAGGTGTACGAAGAAACGGGT CTCGACATCCGCGCTGCCGGGCTGGTGCCCGAAAAGAAGCCCAAGAGTATCGAGATATCAATGAGGGAACAACAA CTTCGCCTCTACGTGTTCCGCGACATTCCGATGGATACCGACTTCCAGCCGCGGACACGGAAGGAGATCAGCAAG ATCCAATGGTATAGGCTGTCAGAGCTTCCGACCTTTTCCAAAAAAGGCGACAAGAGTGCGCAGCACAACGACGAC GGAGCCGGAAACCAAAATCGCAAGTTCTACATGGTCGCACCTTTCTTGGTACCCCTGAAAAAATGGATCGCGTCG CAGAGGAAGATGGATCAGAAGAGAGCTGCGAGCGCGAATCAAACTAACCTTGCTCCTCAGTACTCAGCCGCCGAC GAAGCTTTCAGCATCGATGACGAAACGTGGGCCACGGACCAACGAGGCGCTCCCGACGGACTTAGTTCTGCCGAG ACCCTCAGCGGAGCCACACAAGAACTTCAACGCCTGCTGAAGATGCAGCGACACATGGAGGCCTCCCTACAACCT CAGCATCAGAACAAGGGCAGCGCACTTCTCTCCATTCTTCAGGCTGGTAACAACTCTCGGCCGCAGGACGTGACA AAGCTGCCGCAGACACCTGTAGACCTGAGCGGCGCGGAGCCGCCTCCTCCTCCTCGCAACCCACATCATCATACG AATCAGCACCACCCCGTCTCGCGCGACACACATGCGCAAGAGCCGCCTCCTAGCTTCAAGCTGGGCTCGAATCAG AAAACCGTGACGCTGAACGTCATGTCAAAGCAGGACTACAACCCCCCAAAGCCCCCACCGCACGCAGCGGGCATG GGTCAGCAGCAGCACCCCGTCCGACGTGACAGGTCTCTGGTGAACACACAACCCTTGCCGTCTCAGATACTGCAG GATGTGCTTAGCAGAAGTGCCTCTCATGGCTCGCCGGCATCTCATCAAACTAGTCGCGTTCAGATGCAATCGGGT CAAACAGGAGGTCCAGTGCACTCGCCCTTGCCCCCAACCGTACATGTTGGGCAGGGTTCGCGGACGGCGCAACTC GACGGGCATTCGATGGCATTGATGAAGGTTATGAAGCGCGACGTAACGCCTACTGTCCCCTACACCGAGGCCTCT TCACACAATAAAAGTCAAGCTTCGGTGCCAAAGCATCAGCCTGCAGCGACGATGCCTCCATACGGCAGCGTCTCG TTACCGCGGCAGCTTCCACATTTAACCGACAGCTCACCAAGGCACGCGTCGAGCTCAGCGCTTCCCAGAATTGGA GCCAGTCTATCCACGGATGACCACCGATCTGCACTACTGGGGATATTCAAGAGGACCGAACTTGATGCCGGACCA CCAAAGCAACAAGTCCAAGACGACAGAAATCTAGCAGGCCACGCGACGTCTCCGGGGCTACTATCCACACAGCCT CGATTGTCACAGAATGGCCTTTCGGAGCATGGCGCGCAGGGCAATCGGATGCTTTACGTACATGGCCCTGGCCAG ACTGGCATTACGAAACAGAAACCGTTGCAGCCGACAATGGTCCTTCAACGAGGCCAAAGTCTGGATGATGATAAC TCACGCGCGAGACTGCCGCTACAAGGGCTGCCTGAACGGCTTTCGGGCGCGCAAGATGCAAAGGCAGTGCAGTCG TCTGGAGCCGTCAGTCGGCGTGCTGGAGGTTCTGACGAGAAGAAGATGCAGCTCTTGTCGCTGTTCGGCCGTCAA CAGAATGCGACGTTAGGCAGTGGCAAAGGCGAGGGGCAGTCGGGCTCGGTGGCCTCGACGTCGCCCCTGAGGGAG AGGGAGCCGCAGACGCCGATGTCCCCGGCGGACCAGAGTTTTGTGCTGGAGTATCTGCAGTCGGTGACGAACAAT GCCGGGCGC |
Transcript | >Ophio5|6272 ATGGCCAGAACCCAGATGCTGCTAGAGGATTGGCTGGACGATCTATGCGTCCGCTTCATCATCAATCTTCCCCAC GAAGACTTATCATCGGTCGCCCGGATCTGTTTCCAGGTCGAGGAGGCTCAATGGTTTTACGAAGACTTCATTCGA CCGCTTGATCCAACCCTCCCGTCCATGTCGCTCCGAACGTTTTGCCTGAGAATCTTTCAACATTGTCCGCTTCTG GCCTCATTCTCCGTCGAGAACCATACAGAGGCGTTCGAGGAATTCTTGCAATACAAAACGCGAGTACCCGTCCGC GGCGCCATTATGCTCAACCAAGCAATGGACTCGGTGGTCCTAGTCAAAGGCTGGAAAAAGGGAGCCAGCTGGAGT TTCCCCCGCGGTAAGATTAACAAAGATGAGGATGACCTCGATTGTGCTGTCCGCGAGGTGTACGAAGAAACGGGT CTCGACATCCGCGCTGCCGGGCTGGTGCCCGAAAAGAAGCCCAAGAGTATCGAGATATCAATGAGGGAACAACAA CTTCGCCTCTACGTGTTCCGCGACATTCCGATGGATACCGACTTCCAGCCGCGGACACGGAAGGAGATCAGCAAG ATCCAATGGTATAGGCTGTCAGAGCTTCCGACCTTTTCCAAAAAAGGCGACAAGAGTGCGCAGCACAACGACGAC GGAGCCGGAAACCAAAATCGCAAGTTCTACATGGTCGCACCTTTCTTGGTACCCCTGAAAAAATGGATCGCGTCG CAGAGGAAGATGGATCAGAAGAGAGCTGCGAGCGCGAATCAAACTAACCTTGCTCCTCAGTACTCAGCCGCCGAC GAAGCTTTCAGCATCGATGACGAAACGTGGGCCACGGACCAACGAGGCGCTCCCGACGGACTTAGTTCTGCCGAG ACCCTCAGCGGAGCCACACAAGAACTTCAACGCCTGCTGAAGATGCAGCGACACATGGAGGCCTCCCTACAACCT CAGCATCAGAACAAGGGCAGCGCACTTCTCTCCATTCTTCAGGCTGGTAACAACTCTCGGCCGCAGGACGTGACA AAGCTGCCGCAGACACCTGTAGACCTGAGCGGCGCGGAGCCGCCTCCTCCTCCTCGCAACCCACATCATCATACG AATCAGCACCACCCCGTCTCGCGCGACACACATGCGCAAGAGCCGCCTCCTAGCTTCAAGCTGGGCTCGAATCAG AAAACCGTGACGCTGAACGTCATGTCAAAGCAGGACTACAACCCCCCAAAGCCCCCACCGCACGCAGCGGGCATG GGTCAGCAGCAGCACCCCGTCCGACGTGACAGGTCTCTGGTGAACACACAACCCTTGCCGTCTCAGATACTGCAG GATGTGCTTAGCAGAAGTGCCTCTCATGGCTCGCCGGCATCTCATCAAACTAGTCGCGTTCAGATGCAATCGGGT CAAACAGGAGGTCCAGTGCACTCGCCCTTGCCCCCAACCGTACATGTTGGGCAGGGTTCGCGGACGGCGCAACTC GACGGGCATTCGATGGCATTGATGAAGGTTATGAAGCGCGACGTAACGCCTACTGTCCCCTACACCGAGGCCTCT TCACACAATAAAAGTCAAGCTTCGGTGCCAAAGCATCAGCCTGCAGCGACGATGCCTCCATACGGCAGCGTCTCG TTACCGCGGCAGCTTCCACATTTAACCGACAGCTCACCAAGGCACGCGTCGAGCTCAGCGCTTCCCAGAATTGGA GCCAGTCTATCCACGGATGACCACCGATCTGCACTACTGGGGATATTCAAGAGGACCGAACTTGATGCCGGACCA CCAAAGCAACAAGTCCAAGACGACAGAAATCTAGCAGGCCACGCGACGTCTCCGGGGCTACTATCCACACAGCCT CGATTGTCACAGAATGGCCTTTCGGAGCATGGCGCGCAGGGCAATCGGATGCTTTACGTACATGGCCCTGGCCAG ACTGGCATTACGAAACAGAAACCGTTGCAGCCGACAATGGTCCTTCAACGAGGCCAAAGTCTGGATGATGATAAC TCACGCGCGAGACTGCCGCTACAAGGGCTGCCTGAACGGCTTTCGGGCGCGCAAGATGCAAAGGCAGTGCAGTCG TCTGGAGCCGTCAGTCGGCGTGCTGGAGGTTCTGACGAGAAGAAGATGCAGCTCTTGTCGCTGTTCGGCCGTCAA CAGAATGCGACGTTAGGCAGTGGCAAAGGCGAGGGGCAGTCGGGCTCGGTGGCCTCGACGTCGCCCCTGAGGGAG AGGGAGCCGCAGACGCCGATGTCCCCGGCGGACCAGAGTTTTGTGCTGGAGTATCTGCAGTCGGTGACGAACAAT GCCGGGCGCTAG |
Gene | >Ophio5|6272 ATGGCCAGAACCCAGATGCTGCTAGAGGATTGTTCGTCACAACCAACCCCTGAAGCTCGCATAGCATCTGCTAAC CACTACTGGCAGGGCTGGACGATCTATGCGTCCGCTTCATCATCAATCTTCCCCACGAAGACTTATCATCGGTCG CCCGGATCTGTTTCCAGGTCGAGGAGGCTCAATGGTTTTACGAAGACTTCATTCGACCGCTTGATCCAACCCTCC CGTCCATGTCGCTCCGAACGTTTTGCCTGAGAATCTTTCAACATTGTCCGCTTCTGGCCTCATTCTCCGTCGAGA ACCATACAGAGGCGTTCGAGGAATTCTTGCAATACAAAACGCGAGTACCCGTCCGCGGCGCCATTATGCTCAACC AAGCAATGGACTCGGTGGTCCTAGTCAAAGGCTGGAAAAAGGGAGCCAGCTGGAGTTTCCCCCGCGGTAAGATTA ACAAAGATGAGGATGACCTCGATTGTGCTGTCCGCGAGGTGTACGAAGAAACGGGTCTCGACATCCGCGCTGCCG GGCTGGTGCCCGAAAAGAAGCCCAAGAGTATCGAGATATCAATGAGGGAACAACAACTTCGCCTCTACGTGTTCC GCGACATTCCGATGGATACCGACTTCCAGCCGCGGACACGGAAGGAGATCAGCAAGATCCAATGGTATAGGCTGT CAGAGCTTCCGACCTTTTCCAAAAAAGGCGACAAGAGTGCGCAGCACAACGACGACGGAGCCGGAAACCAAAATC GCAAGTTCTACATGGTCGCACCTTTCTTGGTACCCCTGAAAAAATGGATCGCGTCGCAGAGGAAGATGGATCAGA AGAGAGCTGCGAGCGCGAATCAAACTAACCTTGCTCCTCAGTACTCAGCCGCCGACGAAGCTTTCAGCATCGATG ACGAAACGTGGGCCACGGACCAACGAGGCGCTCCCGACGGACTTAGTTCTGCCGAGACCCTCAGCGGAGCCACAC AAGAACTTCAACGCCTGCTGAAGATGCAGCGACACATGGAGGCCTCCCTACAACCTCAGCATCAGAACAAGGGCA GCGCACTTCTCTCCATTCTTCAGGCTGGTAACAACTCTCGGCCGCAGGACGTGACAAAGCTGCCGCAGACACCTG TAGACCTGAGCGGCGCGGAGCCGCCTCCTCCTCCTCGCAACCCACATCATCATACGAATCAGCACCACCCCGTCT CGCGCGACACACATGCGCAAGAGCCGCCTCCTAGCTTCAAGCTGGGCTCGAATCAGAAAACCGTGACGCTGAACG TCATGTCAAAGCAGGACTACAACCCCCCAAAGCCCCCACCGCACGCAGCGGGCATGGGTCAGCAGCAGCACCCCG TCCGACGTGACAGGTCTCTGGTGAACACACAACCCTTGCCGTCTCAGATACTGCAGGATGTGCTTAGCAGAAGTG CCTCTCATGGCTCGCCGGCATCTCATCAAACTAGTCGCGTTCAGATGCAATCGGGTCAAACAGGAGGTCCAGTGC ACTCGCCCTTGCCCCCAACCGTACATGTTGGGCAGGGTTCGCGGACGGCGCAACTCGACGGGCATTCGATGGCAT TGATGAAGGTTATGAAGCGCGACGTAACGCCTACTGTCCCCTACACCGAGGCCTCTTCACACAATAAAAGTCAAG CTTCGGTGCCAAAGCATCAGCCTGCAGCGACGATGCCTCCATACGGCAGCGTCTCGTTACCGCGGCAGCTTCCAC ATTTAACCGACAGCTCACCAAGGCACGCGTCGAGCTCAGCGCTTCCCAGAATTGGAGCCAGTCTATCCACGGATG ACCACCGATCTGCACTACTGGGGATATTCAAGAGGACCGAACTTGATGCCGGACCACCAAAGCAACAAGTCCAAG ACGACAGAAATCTAGCAGGCCACGCGACGTCTCCGGGGCTACTATCCACACAGCCTCGATTGTCACAGAATGGCC TTTCGGAGCATGGCGCGCAGGGCAATCGGATGCTTTACGTACATGGCCCTGGCCAGACTGGCATTACGAAACAGA AACCGTTGCAGCCGACAATGGTCCTTCAACGAGGCCAAAGTCTGGATGATGATAACTCACGCGCGAGACTGCCGC TACAAGGGCTGCCTGAACGGCTTTCGGGCGCGCAAGATGCAAAGGCAGTGCAGTCGTCTGGAGCCGTCAGTCGGC GTGCTGGAGGTTCTGACGAGAAGAAGATGCAGCTCTTGTCGCTGTTCGGCCGTCAACAGAATGCGACGTTAGGCA GTGGCAAAGGCGAGGGGCAGTCGGGCTCGGTGGCCTCGACGTCGCCCCTGAGGGAGAGGGAGCCGCAGACGCCGA TGTCCCCGGCGGACCAGAGTTTTGTGCTGGAGTATCTGCAGTCGGTGACGAACAATGCCGGGCGCTAG |