Protein ID | Ophio5|6262 |
Gene name | |
Location | scaffold_54:28248..29589 |
Strand | - |
Gene length (bp) | 1341 |
Transcript length (bp) | 1341 |
Coding sequence length (bp) | 1338 |
Protein length (aa) | 446 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 1.2E-13 | 93 | 401 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P23548|GUN_PAEPO | Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 | 58 | 440 | 1.0E-08 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0071704 | organic substance metabolic process | Yes |
GO:0016787 | hydrolase activity | No |
GO:0003824 | catalytic activity | No |
GO:0008150 | biological_process | No |
GO:0003674 | molecular_function | No |
GO:0008152 | metabolic process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 43 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6262 MRKDTIDINLLDPSFPSLSMKSGLVSRLVCLLCYAWLSHSLAEVEAPSQTKPRVPLSVSGRWIVDTTGQRVKLRC INWAGHLEVNMPEGLHRQSVEHTADWIASQGFNCVRLTYSIDMALQPDVTVEDSFHRAAKAAGVDDMAMMRLHSQ AVDKNPFLARGGVTILDVFDQVQSALWHRGIMTVLDNHVSRASWCCDLGDGNGWWKEAPLYMAENSRFFDKGQWQ TGLAKMAAWSRSRPGIVGLSLRNELRASVTQLLFAPETWLRYMPVAARMVHSANPDALIIVGGINGGTDLSPLRL RAMDDSGWRTKRVWEAHSYSFTVTTPNFGICPLLQAEYGGLYGFVLEQHRPYTGPLFLSEFGVDMTGGPRHGLSD KDTRFLDCLAGYMAGNDADWALWAIQGSYYVRGKTVDYNETWGALDYEWRDWRNPSFKAKLGRMLGVTQGP |
Coding | >Ophio5|6262 ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCG |
Transcript | >Ophio5|6262 ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCGTAA |
Gene | >Ophio5|6262 ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCGTAA |