Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6262
Gene name
Locationscaffold_54:28248..29589
Strand-
Gene length (bp)1341
Transcript length (bp)1341
Coding sequence length (bp)1338
Protein length (aa) 446

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00150 Cellulase Cellulase (glycosyl hydrolase family 5) 1.2E-13 93 401

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P23548|GUN_PAEPO Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 58 440 1.0E-08

GO

GO Term Description Terminal node
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Yes
GO:0071704 organic substance metabolic process Yes
GO:0016787 hydrolase activity No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0003674 molecular_function No
GO:0008152 metabolic process No
GO:0016798 hydrolase activity, acting on glycosyl bonds No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6262
MRKDTIDINLLDPSFPSLSMKSGLVSRLVCLLCYAWLSHSLAEVEAPSQTKPRVPLSVSGRWIVDTTGQRVKLRC
INWAGHLEVNMPEGLHRQSVEHTADWIASQGFNCVRLTYSIDMALQPDVTVEDSFHRAAKAAGVDDMAMMRLHSQ
AVDKNPFLARGGVTILDVFDQVQSALWHRGIMTVLDNHVSRASWCCDLGDGNGWWKEAPLYMAENSRFFDKGQWQ
TGLAKMAAWSRSRPGIVGLSLRNELRASVTQLLFAPETWLRYMPVAARMVHSANPDALIIVGGINGGTDLSPLRL
RAMDDSGWRTKRVWEAHSYSFTVTTPNFGICPLLQAEYGGLYGFVLEQHRPYTGPLFLSEFGVDMTGGPRHGLSD
KDTRFLDCLAGYMAGNDADWALWAIQGSYYVRGKTVDYNETWGALDYEWRDWRNPSFKAKLGRMLGVTQGP
Coding >Ophio5|6262
ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC
TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG
AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT
ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT
TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA
GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA
GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA
CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT
GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG
ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC
CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG
CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT
CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG
CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG
CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC
AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT
CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC
GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCG
Transcript >Ophio5|6262
ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC
TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG
AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT
ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT
TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA
GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA
GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA
CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT
GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG
ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC
CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG
CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT
CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG
CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG
CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC
AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT
CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC
GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCGTAA
Gene >Ophio5|6262
ATGCGAAAGGATACCATCGACATCAATCTCCTCGACCCATCTTTTCCCTCCCTCTCCATGAAGAGCGGCCTTGTC
TCCCGGCTGGTGTGCTTGCTCTGCTATGCCTGGCTCAGCCACAGCCTGGCGGAGGTGGAAGCCCCGTCGCAGACG
AAGCCGCGGGTGCCCCTGAGCGTCTCGGGCCGCTGGATCGTCGACACGACCGGGCAGCGCGTCAAGCTGCGCTGT
ATCAACTGGGCCGGCCATCTCGAGGTCAATATGCCCGAGGGCCTGCATAGGCAATCTGTCGAGCACACGGCCGAT
TGGATCGCGTCTCAGGGCTTCAACTGCGTTCGCCTCACCTACTCCATCGACATGGCGCTTCAGCCAGACGTGACA
GTCGAGGACTCGTTCCACCGCGCAGCAAAGGCCGCCGGTGTCGACGACATGGCCATGATGAGGCTTCACAGTCAA
GCCGTCGACAAGAACCCATTCCTCGCCCGCGGCGGCGTCACCATCCTTGACGTCTTCGACCAGGTGCAATCGGCA
CTCTGGCATCGCGGCATCATGACGGTGCTCGACAACCACGTCAGTCGCGCAAGCTGGTGCTGCGATCTGGGCGAT
GGTAACGGTTGGTGGAAGGAGGCGCCCCTATACATGGCCGAGAACAGTCGCTTCTTCGACAAAGGTCAGTGGCAG
ACGGGCCTGGCCAAAATGGCGGCCTGGTCCCGGTCAAGACCCGGCATCGTCGGCCTCTCGCTGCGCAACGAGCTC
CGCGCGTCCGTGACGCAGCTGCTGTTCGCGCCCGAGACCTGGCTGCGGTACATGCCCGTCGCGGCACGGATGGTG
CACTCGGCCAACCCGGACGCCCTCATCATCGTCGGCGGTATCAACGGCGGCACCGACCTTTCGCCCCTGCGGCTT
CGCGCCATGGACGACAGCGGATGGCGGACGAAGCGCGTGTGGGAGGCCCACAGCTACAGCTTCACCGTGACGACG
CCCAACTTCGGCATCTGTCCCCTGCTGCAGGCCGAATATGGCGGACTGTATGGCTTCGTGCTGGAGCAGCATAGG
CCCTACACGGGACCCTTGTTCCTGTCCGAGTTTGGCGTCGATATGACGGGCGGGCCTCGTCATGGCCTGTCCGAC
AAGGACACCCGCTTCCTCGACTGCTTGGCGGGCTATATGGCCGGCAATGACGCCGACTGGGCGCTTTGGGCCATT
CAGGGCTCGTATTACGTCCGTGGGAAGACGGTCGATTATAACGAGACCTGGGGGGCGCTCGACTATGAGTGGCGC
GACTGGCGGAATCCTAGCTTCAAAGCCAAGCTGGGGAGGATGCTGGGAGTGACCCAAGGGCCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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