Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6212
Gene name
Locationscaffold_532:25..848
Strand-
Gene length (bp)823
Transcript length (bp)660
Coding sequence length (bp)657
Protein length (aa) 219

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 38 60 22
3 91 110 19
4 123 145 22
5 160 182 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6212
MWLLLLYMTASMTLKLSILTLYLRLFQPVRHITWMVRIGFAIIVPFYTACVTGVLALCLPRVASHGGAWPSPEVV
RLLHCIGRCSIICKVLSVFNSVSDAYLLFIPLHLIRDLNMSRRKKIGVVAVFLTGSIACITSIIGAVFRMIQGHD
FGWEIIPTTLALNSEMTIGFVCSCVPVVFVLFKGSINSLSEASSSMFGRGRGRNDDQKTPGQPRGKVLS
Coding >Ophio5|6212
ATGTGGTTACTGCTCCTCTACATGACTGCCTCCATGACCCTCAAATTATCCATCTTAACCCTCTATCTTCGACTC
TTTCAGCCGGTCCGCCACATCACTTGGATGGTCAGAATTGGTTTCGCCATCATTGTGCCCTTCTACACTGCTTGT
GTGACTGGCGTCTTGGCATTATGCTTGCCGCGAGTGGCAAGTCATGGCGGTGCATGGCCGTCTCCGGAAGTCGTC
CGTCTTCTGCACTGCATCGGACGGTGCAGTATCATCTGCAAGGTCTTGTCCGTTTTCAACTCCGTGTCCGACGCT
TACCTCTTGTTCATTCCCCTGCACCTCATTAGGGATTTGAACATGTCCCGCAGGAAAAAGATCGGCGTCGTCGCC
GTCTTCCTAACCGGCTCCATAGCCTGCATTACCTCCATCATAGGGGCCGTGTTTCGAATGATTCAGGGCCACGAT
TTCGGATGGGAAATCATCCCAACCACTTTGGCCTTAAACTCGGAGATGACAATCGGCTTCGTATGCAGCTGCGTA
CCAGTTGTCTTCGTTCTCTTCAAGGGAAGCATCAATTCCCTCAGTGAGGCATCGTCATCCATGTTTGGCCGTGGG
CGCGGCCGAAACGATGACCAAAAGACGCCAGGTCAGCCGCGGGGAAAAGTACTGTCA
Transcript >Ophio5|6212
ATGTGGTTACTGCTCCTCTACATGACTGCCTCCATGACCCTCAAATTATCCATCTTAACCCTCTATCTTCGACTC
TTTCAGCCGGTCCGCCACATCACTTGGATGGTCAGAATTGGTTTCGCCATCATTGTGCCCTTCTACACTGCTTGT
GTGACTGGCGTCTTGGCATTATGCTTGCCGCGAGTGGCAAGTCATGGCGGTGCATGGCCGTCTCCGGAAGTCGTC
CGTCTTCTGCACTGCATCGGACGGTGCAGTATCATCTGCAAGGTCTTGTCCGTTTTCAACTCCGTGTCCGACGCT
TACCTCTTGTTCATTCCCCTGCACCTCATTAGGGATTTGAACATGTCCCGCAGGAAAAAGATCGGCGTCGTCGCC
GTCTTCCTAACCGGCTCCATAGCCTGCATTACCTCCATCATAGGGGCCGTGTTTCGAATGATTCAGGGCCACGAT
TTCGGATGGGAAATCATCCCAACCACTTTGGCCTTAAACTCGGAGATGACAATCGGCTTCGTATGCAGCTGCGTA
CCAGTTGTCTTCGTTCTCTTCAAGGGAAGCATCAATTCCCTCAGTGAGGCATCGTCATCCATGTTTGGCCGTGGG
CGCGGCCGAAACGATGACCAAAAGACGCCAGGTCAGCCGCGGGGAAAAGTACTGTCATGA
Gene >Ophio5|6212
ATGTGGTTACTGCTCCTCTACATGACTGCCTCCATGACCCTCAAATTATCCATCTTAACCCTCTATCTTCGACTC
TTTCAGCCGGTCCGCCACATCACTTGGATGGTCAGAATTGGTTTCGCCATCATTGTGCCCTTCTACACTGCTTGT
GTGACTGGCGTCTTGGCATTATGCTTGCCGCGAGTGGCAAGTCATGGCGGTGCATGGCCGTCTCCGGAAGTCGTC
CGTCTTCTGCACTGCATCGGACGGTGCAGTATCATCTGCAAGGTCTTGTCCGTTTTCAACTCCGTGTCCGACGCT
TACCTCTTGTTCATTCCCCTGCACCTCATTAGGGATTTGAACATGTCCCGCAGGAAAAAGATCGGCGTCGTCGCC
GTCTTCCTAACCGGCTCCATGTAGGTATTCCGCTCCCCAGCTTTGATTCTATCCACGAGTCTGATGGGAATAACG
CAGAGCCTGCATTACCTCCATCATAGGGGCCGTGTTTCGAATGATTCAGGGCCACGATTTCGGATGGGAAATCAT
CCCAACCACTTTGGCCTTGTAAGAGACATCCTCAGAGCAGTGTAAGAAAAGTACTAATCGTAGGGGTCCAGAAAC
TCGGAGATGACAATCGGCTTCGTATGCAGCTGCGTACCAGTTGTCTTCGTTCTCTTCAAGGGAAGCATCAATTCC
CTCAGTGAGGCATCGTCATCCATGTTTGGCCGTGGGCGCGGCCGAAACGATGACCAAGTAAACTGCAAGAAGGAA
TGTGCAAAGACTGTGGTTGGAAAACGACTCACAGAAGACGCCAGGTCAGCCGCGGGGAAAAGTACTGTCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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