Protein ID | Ophio5|6210 |
Gene name | |
Location | scaffold_531:8112..9675 |
Strand | + |
Gene length (bp) | 1563 |
Transcript length (bp) | 1563 |
Coding sequence length (bp) | 1560 |
Protein length (aa) | 520 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 3.2E-35 | 207 | 484 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P23548|GUN_PAEPO | Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 | 158 | 503 | 4.0E-41 |
sp|P54583|GUN1_ACIC1 | Endoglucanase E1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=Acel_0614 PE=1 SV=1 | 170 | 503 | 4.0E-36 |
sp|P10474|GUNB_CALSA | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus GN=celB PE=3 SV=1 | 168 | 503 | 3.0E-24 |
sp|P50400|GUND_CELFI | Endoglucanase D OS=Cellulomonas fimi GN=cenD PE=3 SV=1 | 168 | 503 | 4.0E-24 |
sp|P19487|GUNA_XANCP | Major extracellular endoglucanase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=engXCA PE=1 SV=2 | 173 | 503 | 3.0E-22 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P23548|GUN_PAEPO | Endoglucanase OS=Paenibacillus polymyxa PE=3 SV=2 | 158 | 503 | 4.0E-41 |
sp|P54583|GUN1_ACIC1 | Endoglucanase E1 OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=Acel_0614 PE=1 SV=1 | 170 | 503 | 4.0E-36 |
sp|P10474|GUNB_CALSA | Endoglucanase/exoglucanase B OS=Caldicellulosiruptor saccharolyticus GN=celB PE=3 SV=1 | 168 | 503 | 3.0E-24 |
sp|P50400|GUND_CELFI | Endoglucanase D OS=Cellulomonas fimi GN=cenD PE=3 SV=1 | 168 | 503 | 4.0E-24 |
sp|P19487|GUNA_XANCP | Major extracellular endoglucanase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=engXCA PE=1 SV=2 | 173 | 503 | 3.0E-22 |
sp|P04956|GUNB_CLOTH | Endoglucanase B OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) GN=celB PE=3 SV=1 | 168 | 453 | 1.0E-14 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0071704 | organic substance metabolic process | Yes |
GO:0016787 | hydrolase activity | No |
GO:0003824 | catalytic activity | No |
GO:0008150 | biological_process | No |
GO:0003674 | molecular_function | No |
GO:0008152 | metabolic process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.2173 | 0.2195 | 0.3024 | 0.2659 | 0.1277 | 0.0227 | 0.4599 | 0.4684 | 0.6675 | 0.0724 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 111 | 128 | 17 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH5_24 | 2.0E-157 | 175 | 488 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 12.97 | 5.47 | 20.46 |
CcL | In ants, during behavior modification | 8.66 | 2.95 | 14.36 |
CcD | In ants, recently dead | 4.96 | 1.41 | 8.51 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.184258 | no |
SC16a | CcD | 0.002627 | yes |
CcL | CcD | 0.106796 | no |
Orthofinder run ID | 4 |
Orthogroup | 2654 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6210 MAGGGDPPTGLASHSPPESPPLESPLESPLKSPLESFLAFSPSVPVTPLESLHSYGARPARQAAPPLKIINYDTW VKVKGYPQLPLFRRPGSKRLRTVQKLRRWQPSPCKMFLILLAVVLVVLAGYIWRKEARLAARWEPDTESRLFSEK PLPPPQQSSNISSYRLPLKTRGRDIVDEDGRRFKLSSVNWYGASDELFVVGGLEVQHRDVIAQTMLRLGFNSVRL PYSDELVATNPVVDARQLSANPDLIGKRALDVLEVVVKSLTDAGLAVIVNNHITTATWCCGIDPCDSGWANDHLG MLCRVGQTEEQWMRHWETVMARFVDNPRVIGADLRNEVRGLWGTMPWSRWAAAAERCGNRLLRLRSDWLIVVEGT ESANDLSGARDRPIRLDVADRLVYSAHVYAWSGWGSLEGRFAQRDYDSFVKTMRHNWAYLLDQDIAPVWVGELGA PHEPSNGDAHYWKNLWRYLKAVDADFGYWAINPRKPKDNEVETYSIVADDWVTPVLDYRLKDMIELMHAS |
Coding | >Ophio5|6210 ATGGCTGGCGGCGGGGATCCCCCAACGGGCCTGGCTTCCCATTCCCCGCCGGAGAGTCCTCCCCTGGAAAGTCCC CTGGAAAGTCCCCTGAAAAGTCCCCTGGAAAGCTTCCTGGCCTTCAGCCCGAGCGTGCCGGTCACTCCGCTGGAA AGCCTCCACTCTTACGGTGCTCGTCCCGCTCGGCAGGCGGCGCCGCCCCTGAAGATCATCAACTACGACACCTGG GTCAAGGTCAAAGGCTACCCTCAGCTGCCGCTATTCCGGCGGCCCGGCTCGAAGAGGCTACGGACGGTCCAGAAG CTTCGGCGGTGGCAGCCTTCGCCCTGTAAAATGTTTCTCATCTTGCTGGCCGTGGTGCTGGTGGTGTTGGCCGGC TATATCTGGCGCAAGGAGGCTCGTCTGGCGGCCCGCTGGGAGCCGGACACGGAGTCGCGGCTTTTCAGCGAGAAG CCTCTCCCGCCGCCTCAGCAGAGCAGCAACATCAGCTCGTACCGGCTCCCGCTGAAGACGCGAGGGCGCGACATC GTCGACGAGGATGGACGACGCTTCAAGCTCTCGTCGGTCAACTGGTATGGCGCCAGCGACGAGCTCTTCGTGGTG GGAGGGCTGGAAGTACAACATCGCGACGTGATTGCTCAGACGATGCTGCGCCTGGGCTTCAACAGCGTCCGGCTT CCGTACTCGGATGAGCTGGTGGCGACGAATCCGGTCGTGGACGCGCGGCAGCTCAGTGCGAACCCGGACCTGATC GGGAAGCGAGCGCTCGACGTGCTCGAGGTCGTCGTCAAGTCGCTGACGGACGCCGGCTTGGCCGTCATCGTCAAT AACCACATCACCACGGCCACCTGGTGCTGCGGCATCGATCCCTGCGACTCTGGTTGGGCCAACGACCACCTCGGC ATGCTGTGCCGGGTCGGCCAGACCGAGGAGCAGTGGATGCGCCATTGGGAGACGGTCATGGCTCGCTTCGTCGAC AACCCGCGCGTCATCGGCGCCGACCTGCGCAACGAGGTCCGCGGACTATGGGGGACCATGCCCTGGTCTCGCTGG GCGGCCGCGGCCGAGCGTTGCGGCAACCGGCTGCTCCGGCTTCGATCGGACTGGCTCATCGTCGTCGAAGGAACC GAGTCGGCCAACGACCTATCGGGCGCGAGGGACCGGCCCATCCGTCTCGACGTCGCCGACCGTCTCGTCTACTCG GCACACGTCTATGCCTGGTCCGGCTGGGGCAGCCTCGAGGGCCGGTTCGCGCAGCGGGACTACGACTCTTTCGTC AAGACGATGCGCCACAACTGGGCCTATCTGCTGGATCAGGACATTGCCCCCGTCTGGGTCGGCGAGCTGGGCGCG CCGCACGAGCCGTCCAACGGTGATGCCCACTACTGGAAAAACCTCTGGCGTTATCTCAAGGCCGTCGACGCCGAC TTTGGATACTGGGCCATCAACCCGCGGAAGCCTAAGGACAACGAGGTTGAGACGTACTCGATTGTCGCCGATGAC TGGGTCACGCCGGTGCTGGATTACCGCCTCAAGGACATGATTGAGCTTATGCACGCCTCT |
Transcript | >Ophio5|6210 ATGGCTGGCGGCGGGGATCCCCCAACGGGCCTGGCTTCCCATTCCCCGCCGGAGAGTCCTCCCCTGGAAAGTCCC CTGGAAAGTCCCCTGAAAAGTCCCCTGGAAAGCTTCCTGGCCTTCAGCCCGAGCGTGCCGGTCACTCCGCTGGAA AGCCTCCACTCTTACGGTGCTCGTCCCGCTCGGCAGGCGGCGCCGCCCCTGAAGATCATCAACTACGACACCTGG GTCAAGGTCAAAGGCTACCCTCAGCTGCCGCTATTCCGGCGGCCCGGCTCGAAGAGGCTACGGACGGTCCAGAAG CTTCGGCGGTGGCAGCCTTCGCCCTGTAAAATGTTTCTCATCTTGCTGGCCGTGGTGCTGGTGGTGTTGGCCGGC TATATCTGGCGCAAGGAGGCTCGTCTGGCGGCCCGCTGGGAGCCGGACACGGAGTCGCGGCTTTTCAGCGAGAAG CCTCTCCCGCCGCCTCAGCAGAGCAGCAACATCAGCTCGTACCGGCTCCCGCTGAAGACGCGAGGGCGCGACATC GTCGACGAGGATGGACGACGCTTCAAGCTCTCGTCGGTCAACTGGTATGGCGCCAGCGACGAGCTCTTCGTGGTG GGAGGGCTGGAAGTACAACATCGCGACGTGATTGCTCAGACGATGCTGCGCCTGGGCTTCAACAGCGTCCGGCTT CCGTACTCGGATGAGCTGGTGGCGACGAATCCGGTCGTGGACGCGCGGCAGCTCAGTGCGAACCCGGACCTGATC GGGAAGCGAGCGCTCGACGTGCTCGAGGTCGTCGTCAAGTCGCTGACGGACGCCGGCTTGGCCGTCATCGTCAAT AACCACATCACCACGGCCACCTGGTGCTGCGGCATCGATCCCTGCGACTCTGGTTGGGCCAACGACCACCTCGGC ATGCTGTGCCGGGTCGGCCAGACCGAGGAGCAGTGGATGCGCCATTGGGAGACGGTCATGGCTCGCTTCGTCGAC AACCCGCGCGTCATCGGCGCCGACCTGCGCAACGAGGTCCGCGGACTATGGGGGACCATGCCCTGGTCTCGCTGG GCGGCCGCGGCCGAGCGTTGCGGCAACCGGCTGCTCCGGCTTCGATCGGACTGGCTCATCGTCGTCGAAGGAACC GAGTCGGCCAACGACCTATCGGGCGCGAGGGACCGGCCCATCCGTCTCGACGTCGCCGACCGTCTCGTCTACTCG GCACACGTCTATGCCTGGTCCGGCTGGGGCAGCCTCGAGGGCCGGTTCGCGCAGCGGGACTACGACTCTTTCGTC AAGACGATGCGCCACAACTGGGCCTATCTGCTGGATCAGGACATTGCCCCCGTCTGGGTCGGCGAGCTGGGCGCG CCGCACGAGCCGTCCAACGGTGATGCCCACTACTGGAAAAACCTCTGGCGTTATCTCAAGGCCGTCGACGCCGAC TTTGGATACTGGGCCATCAACCCGCGGAAGCCTAAGGACAACGAGGTTGAGACGTACTCGATTGTCGCCGATGAC TGGGTCACGCCGGTGCTGGATTACCGCCTCAAGGACATGATTGAGCTTATGCACGCCTCTTGA |
Gene | >Ophio5|6210 ATGGCTGGCGGCGGGGATCCCCCAACGGGCCTGGCTTCCCATTCCCCGCCGGAGAGTCCTCCCCTGGAAAGTCCC CTGGAAAGTCCCCTGAAAAGTCCCCTGGAAAGCTTCCTGGCCTTCAGCCCGAGCGTGCCGGTCACTCCGCTGGAA AGCCTCCACTCTTACGGTGCTCGTCCCGCTCGGCAGGCGGCGCCGCCCCTGAAGATCATCAACTACGACACCTGG GTCAAGGTCAAAGGCTACCCTCAGCTGCCGCTATTCCGGCGGCCCGGCTCGAAGAGGCTACGGACGGTCCAGAAG CTTCGGCGGTGGCAGCCTTCGCCCTGTAAAATGTTTCTCATCTTGCTGGCCGTGGTGCTGGTGGTGTTGGCCGGC TATATCTGGCGCAAGGAGGCTCGTCTGGCGGCCCGCTGGGAGCCGGACACGGAGTCGCGGCTTTTCAGCGAGAAG CCTCTCCCGCCGCCTCAGCAGAGCAGCAACATCAGCTCGTACCGGCTCCCGCTGAAGACGCGAGGGCGCGACATC GTCGACGAGGATGGACGACGCTTCAAGCTCTCGTCGGTCAACTGGTATGGCGCCAGCGACGAGCTCTTCGTGGTG GGAGGGCTGGAAGTACAACATCGCGACGTGATTGCTCAGACGATGCTGCGCCTGGGCTTCAACAGCGTCCGGCTT CCGTACTCGGATGAGCTGGTGGCGACGAATCCGGTCGTGGACGCGCGGCAGCTCAGTGCGAACCCGGACCTGATC GGGAAGCGAGCGCTCGACGTGCTCGAGGTCGTCGTCAAGTCGCTGACGGACGCCGGCTTGGCCGTCATCGTCAAT AACCACATCACCACGGCCACCTGGTGCTGCGGCATCGATCCCTGCGACTCTGGTTGGGCCAACGACCACCTCGGC ATGCTGTGCCGGGTCGGCCAGACCGAGGAGCAGTGGATGCGCCATTGGGAGACGGTCATGGCTCGCTTCGTCGAC AACCCGCGCGTCATCGGCGCCGACCTGCGCAACGAGGTCCGCGGACTATGGGGGACCATGCCCTGGTCTCGCTGG GCGGCCGCGGCCGAGCGTTGCGGCAACCGGCTGCTCCGGCTTCGATCGGACTGGCTCATCGTCGTCGAAGGAACC GAGTCGGCCAACGACCTATCGGGCGCGAGGGACCGGCCCATCCGTCTCGACGTCGCCGACCGTCTCGTCTACTCG GCACACGTCTATGCCTGGTCCGGCTGGGGCAGCCTCGAGGGCCGGTTCGCGCAGCGGGACTACGACTCTTTCGTC AAGACGATGCGCCACAACTGGGCCTATCTGCTGGATCAGGACATTGCCCCCGTCTGGGTCGGCGAGCTGGGCGCG CCGCACGAGCCGTCCAACGGTGATGCCCACTACTGGAAAAACCTCTGGCGTTATCTCAAGGCCGTCGACGCCGAC TTTGGATACTGGGCCATCAACCCGCGGAAGCCTAAGGACAACGAGGTTGAGACGTACTCGATTGTCGCCGATGAC TGGGTCACGCCGGTGCTGGATTACCGCCTCAAGGACATGATTGAGCTTATGCACGCCTCTTGA |