Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6208
Gene name
Locationscaffold_531:964..1660
Strand+
Gene length (bp)696
Transcript length (bp)591
Coding sequence length (bp)588
Protein length (aa) 196

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 1.9E-13 36 129

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6208
MSPLLTLFFLFLLLLPLLSAAYDDDEPTAGFNPILKPKAHERIPAGSRYTLVWDTPAVYAAGSLTIGLIGGDEQA
SQESLANITDAVPSSAGRYTWHVASHLGTKRFYGLVLRWGRDPSVFQYSNPFHIIPAPPEPSVSTSSAPTSTLSH
TAVAVAMGTSPPLPAHQTAASPPLLLPRRESLALVAVALAALVVLA
Coding >Ophio5|6208
ATGTCTCCTCTCCTTACCCTCTTCTTCCTCTTCCTCCTCCTCCTCCCTCTCCTCTCCGCCGCCTACGACGACGAC
GAGCCCACCGCCGGCTTCAACCCCATCCTCAAGCCCAAAGCTCACGAGAGGATCCCGGCCGGCTCTCGCTACACG
CTCGTCTGGGACACGCCCGCCGTCTACGCCGCCGGCTCCCTCACCATCGGCCTCATCGGAGGCGACGAGCAGGCC
TCTCAGGAGTCGTTGGCTAACATTACCGACGCCGTTCCGAGCTCTGCTGGTCGCTACACCTGGCACGTTGCCTCC
CATCTCGGTACCAAGCGCTTCTACGGCCTCGTCCTCCGCTGGGGCCGAGACCCCTCCGTCTTCCAGTACTCGAAC
CCCTTCCATATCATCCCCGCTCCGCCCGAGCCCTCCGTATCTACCTCGTCCGCCCCGACTTCGACCCTCTCTCAC
ACCGCCGTCGCCGTCGCCATGGGCACCTCGCCGCCTCTTCCTGCCCACCAGACGGCCGCCTCGCCGCCCTTGCTG
CTACCCCGCCGAGAGAGCCTCGCTCTCGTGGCTGTTGCCCTCGCCGCCCTCGTCGTCCTCGCC
Transcript >Ophio5|6208
ATGTCTCCTCTCCTTACCCTCTTCTTCCTCTTCCTCCTCCTCCTCCCTCTCCTCTCCGCCGCCTACGACGACGAC
GAGCCCACCGCCGGCTTCAACCCCATCCTCAAGCCCAAAGCTCACGAGAGGATCCCGGCCGGCTCTCGCTACACG
CTCGTCTGGGACACGCCCGCCGTCTACGCCGCCGGCTCCCTCACCATCGGCCTCATCGGAGGCGACGAGCAGGCC
TCTCAGGAGTCGTTGGCTAACATTACCGACGCCGTTCCGAGCTCTGCTGGTCGCTACACCTGGCACGTTGCCTCC
CATCTCGGTACCAAGCGCTTCTACGGCCTCGTCCTCCGCTGGGGCCGAGACCCCTCCGTCTTCCAGTACTCGAAC
CCCTTCCATATCATCCCCGCTCCGCCCGAGCCCTCCGTATCTACCTCGTCCGCCCCGACTTCGACCCTCTCTCAC
ACCGCCGTCGCCGTCGCCATGGGCACCTCGCCGCCTCTTCCTGCCCACCAGACGGCCGCCTCGCCGCCCTTGCTG
CTACCCCGCCGAGAGAGCCTCGCTCTCGTGGCTGTTGCCCTCGCCGCCCTCGTCGTCCTCGCCTGA
Gene >Ophio5|6208
ATGTCTCCTCTCCTTACCCTCTTCTTCCTCTTCCTCCTCCTCCTCCCTCTCCTCTCCGCCGCCTACGACGACGAC
GAGCCCACCGCCGGCTTCAACCCCATCCTCAAGCCCAAAGCTCACGAGAGGATCCCGGCCGGCTCTCGCTACACG
CTCGTCTGGGACACGCCCGCCGTCTACGCCGCCGGCTCCCTCACCATCGGCCTCATCGGAGGCGACGAGCAGGCC
TCTCAGGAGTCGTTGGCTAACATTACCGGTAACCCCCCCTCCTCTATACATTAATCTCTTCTCTCCCCCACACAC
TACCTACCTACATACTCTCTTCCTTCTTTCTCCTCACACTCCTCACTCACCCGTCCAGACGCCGTTCCGAGCTCT
GCTGGTCGCTACACCTGGCACGTTGCCTCCCATCTCGGTACCAAGCGCTTCTACGGCCTCGTCCTCCGCTGGGGC
CGAGACCCCTCCGTCTTCCAGTACTCGAACCCCTTCCATATCATCCCCGCTCCGCCCGAGCCCTCCGTATCTACC
TCGTCCGCCCCGACTTCGACCCTCTCTCACACCGCCGTCGCCGTCGCCATGGGCACCTCGCCGCCTCTTCCTGCC
CACCAGACGGCCGCCTCGCCGCCCTTGCTGCTACCCCGCCGAGAGAGCCTCGCTCTCGTGGCTGTTGCCCTCGCC
GCCCTCGTCGTCCTCGCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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