Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6200
Gene name
Locationscaffold_53:44405..45769
Strand+
Gene length (bp)1364
Transcript length (bp)1125
Coding sequence length (bp)1122
Protein length (aa) 374

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 10 27 17
2 48 70 22
3 99 121 22
4 138 160 22
5 191 213 22
6 220 242 22
7 262 279 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6200
MAPKSSDATEGLVYFAIETLLILWRICMRWRSLTFRGLAMDDYLMMLVLVWNVAGTVISCVVLFVTQGLANSGMT
DEERASLSPNSAEFRLRVEGSKTHLAGWISFATLLWTLKLCWLFFYKRLGHRVNKMALKVNMGLIFCGVTYTALL
CVILFGCVPFEKSWQINPDPGDFCHPSSSTLQSWVMLFSDVATDLFITIIPLPGGGQMIWHARINKVNKIGLIIM
FCGGLLTMTFSIARCAIILRDSASATELAAVWSDREAFVAIIVTNVPVLVPLIRQRFWNIKDKSVPSASRSVGDS
RVRGDWNRAHGRGDVVREMPGTSLGVGASASSLPNKMPSASSESFYDSESDGANSPTGDGDMRLGVMNETHIVI
Coding >Ophio5|6200
ATGGCACCCAAGAGCTCCGATGCCACGGAGGGGTTGGTATACTTTGCTATCGAGACCTTGTTGATCCTATGGAGA
ATATGCATGAGATGGAGGTCGTTGACGTTTCGCGGCCTCGCCATGGACGACTACCTCATGATGCTTGTGCTTGTT
TGGAACGTTGCTGGGACTGTAATCTCCTGCGTTGTCCTTTTCGTGACACAGGGGCTGGCAAACAGCGGCATGACC
GACGAGGAGCGTGCATCTCTAAGCCCTAATAGCGCCGAGTTTCGTTTACGAGTCGAGGGGTCCAAGACGCATCTA
GCTGGTTGGATCTCGTTTGCGACTTTGTTGTGGACCCTGAAGCTATGCTGGCTGTTCTTCTACAAACGGCTCGGC
CACCGAGTAAACAAGATGGCGTTGAAGGTCAACATGGGCCTGATCTTTTGCGGCGTTACATACACTGCCCTGCTG
TGCGTTATCCTTTTTGGCTGTGTGCCTTTTGAGAAGTCGTGGCAAATCAACCCTGATCCTGGAGACTTTTGCCAT
CCGTCTTCGTCGACTCTGCAATCTTGGGTCATGCTTTTCTCCGATGTTGCGACCGACCTGTTCATTACTATCATT
CCTCTGCCGGGGGGGGGGCAGATGATCTGGCACGCCCGTATCAACAAAGTGAACAAAATCGGCCTTATAATCATG
TTCTGCGGTGGGCTCCTCACCATGACCTTTAGCATCGCCCGGTGCGCGATAATCCTCAGGGACAGCGCCTCTGCT
ACCGAACTGGCCGCCGTATGGTCCGACCGAGAGGCCTTCGTCGCCATCATCGTGACCAACGTCCCTGTGCTCGTA
CCGCTGATACGACAAAGATTCTGGAACATCAAGGACAAGTCTGTCCCCAGTGCCAGCCGGTCGGTAGGCGATTCG
CGCGTACGAGGTGACTGGAACCGAGCCCACGGCCGAGGAGATGTAGTACGAGAGATGCCCGGAACGAGCCTTGGA
GTCGGTGCGTCTGCGTCTTCACTACCGAATAAAATGCCGAGTGCGAGCTCCGAAAGCTTCTACGATAGCGAGTCG
GACGGGGCCAATAGTCCTACCGGAGACGGCGACATGCGTCTGGGAGTTATGAATGAGACGCATATAGTGATA
Transcript >Ophio5|6200
ATGGCACCCAAGAGCTCCGATGCCACGGAGGGGTTGGTATACTTTGCTATCGAGACCTTGTTGATCCTATGGAGA
ATATGCATGAGATGGAGGTCGTTGACGTTTCGCGGCCTCGCCATGGACGACTACCTCATGATGCTTGTGCTTGTT
TGGAACGTTGCTGGGACTGTAATCTCCTGCGTTGTCCTTTTCGTGACACAGGGGCTGGCAAACAGCGGCATGACC
GACGAGGAGCGTGCATCTCTAAGCCCTAATAGCGCCGAGTTTCGTTTACGAGTCGAGGGGTCCAAGACGCATCTA
GCTGGTTGGATCTCGTTTGCGACTTTGTTGTGGACCCTGAAGCTATGCTGGCTGTTCTTCTACAAACGGCTCGGC
CACCGAGTAAACAAGATGGCGTTGAAGGTCAACATGGGCCTGATCTTTTGCGGCGTTACATACACTGCCCTGCTG
TGCGTTATCCTTTTTGGCTGTGTGCCTTTTGAGAAGTCGTGGCAAATCAACCCTGATCCTGGAGACTTTTGCCAT
CCGTCTTCGTCGACTCTGCAATCTTGGGTCATGCTTTTCTCCGATGTTGCGACCGACCTGTTCATTACTATCATT
CCTCTGCCGGGGGGGGGGCAGATGATCTGGCACGCCCGTATCAACAAAGTGAACAAAATCGGCCTTATAATCATG
TTCTGCGGTGGGCTCCTCACCATGACCTTTAGCATCGCCCGGTGCGCGATAATCCTCAGGGACAGCGCCTCTGCT
ACCGAACTGGCCGCCGTATGGTCCGACCGAGAGGCCTTCGTCGCCATCATCGTGACCAACGTCCCTGTGCTCGTA
CCGCTGATACGACAAAGATTCTGGAACATCAAGGACAAGTCTGTCCCCAGTGCCAGCCGGTCGGTAGGCGATTCG
CGCGTACGAGGTGACTGGAACCGAGCCCACGGCCGAGGAGATGTAGTACGAGAGATGCCCGGAACGAGCCTTGGA
GTCGGTGCGTCTGCGTCTTCACTACCGAATAAAATGCCGAGTGCGAGCTCCGAAAGCTTCTACGATAGCGAGTCG
GACGGGGCCAATAGTCCTACCGGAGACGGCGACATGCGTCTGGGAGTTATGAATGAGACGCATATAGTGATATGA
Gene >Ophio5|6200
ATGGCACCCAAGAGCTCCGATGCCACGGAGGGGTTGGTATACTTTGCTATCGAGACCTTGTTGATCCTATGGAGA
ATATGCATGAGATGGAGGTCGTTGACGTTTCGCGGCCTCGCCATGGACGACTACCTCATGATGCTTGTGCTTGTA
GGTAGTCCTGACAAGCCATGCCCTCTGCCGCCCATGGACGCTGACAATTTTCGACCAGGTTTGGAACGTTGCTGG
GACTGTAATCTCCTGCGTTGTCCTTTTCGTGACACAGGGGCTGGCAAACAGCGGGTAAGACATACAAACGCTGTC
AAGACTCGCAGGCTAACGAGGAGCTTGCAGCATGACCGACGAGGAGCGTGCATCTCTAAGCCCTAATAGCGCCGA
GTTTCGTTTACGAGTCGAGGGGTCCAAGACGCATCTAGCTGGTTGGATCTCGTTTGCGACTTTGTTGTGGACCCT
GAAGCTATGCTGGCTGTTCTTCTACAAACGGCTCGGCCACCGAGTAAACAAGATGGCGTTGAAGGTCAACATGGG
CCTGATCTTTTGCGGCGTTACATACACTGCCCTGCTGTGCGTTATCCTTTTTGGCTGTGTGCCTTTTGAGAAGTC
GTGGCAAATCAACCCTGATCCTGGAGGTATGTCGTCCGTTCTCCAGTCTCGCGAGTCAATCTGCTGATGGAAGAA
CGACGTTGAAGACTTTTGCCATCCGTCTTCGTCGACTCTGCAATCTTGGGTCATGCTTTTCTCCGATGTTGCGAC
CGACCTGTTCATTACTATCATTCCTCTGCCGGTGAGTGTCTTCTGACATGTGCCCCTTTTCTAGGTGGCGGTACA
TGCATGCAGTCCTGATGACCCAGGGGGGGGGGCAGATGATCTGGCACGCCCGTATCAACAAAGTGAACAAAATCG
GCCTTATAATCATGTTCTGCGGTGGGCTCCTCACCATGACCTTTAGCATCGCCCGGTGCGCGATAATCCTCAGGG
ACAGCGCCTCTGCTACCGAACTGGCCGCCGTATGGTCCGACCGAGAGGCCTTCGTCGCCATCATCGTGACCAACG
TCCCTGTGCTCGTACCGCTGATACGACAAAGATTCTGGAACATCAAGGACAAGTCTGTCCCCAGTGCCAGCCGGT
CGGTAGGCGATTCGCGCGTACGAGGTGACTGGAACCGAGCCCACGGCCGAGGAGATGTAGTACGAGAGATGCCCG
GAACGAGCCTTGGAGTCGGTGCGTCTGCGTCTTCACTACCGAATAAAATGCCGAGTGCGAGCTCCGAAAGCTTCT
ACGATAGCGAGTCGGACGGGGCCAATAGTCCTACCGGAGACGGCGACATGCGTCTGGGAGTTATGAATGAGACGC
ATATAGTGATATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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