Protein ID | Ophio5|6172 |
Gene name | |
Location | scaffold_528:8160..9648 |
Strand | - |
Gene length (bp) | 1488 |
Transcript length (bp) | 1488 |
Coding sequence length (bp) | 1485 |
Protein length (aa) | 495 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF08546 | ApbA_C | Ketopantoate reductase PanE/ApbA C terminal | 9.8E-22 | 331 | 467 |
PF02558 | ApbA | Ketopantoate reductase PanE/ApbA | 4.1E-16 | 91 | 222 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q9HDU6|PANE_SCHPO | Probable 2-dehydropantoate 2-reductase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB2B2.09c PE=3 SV=1 | 91 | 468 | 2.0E-16 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 16 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|6172 MARPVLLRLHSTTSSSPVRFFHSTSAPPRSSSSSSSSNNKSATTKKPGWLTALMDASPGVGPQLYAWNASNVETC TTPVPPPSTTESRGRIYIVGGGNIGRLFAICLARLSLPITLVVKRTTQLADYASHGIHLVKPSSSSSSSSSSSSS SSSSCSTGSTTAPVSVEYWSETPPDHGPVRTVEPIRNLIVATKASAAVPAIDRLRRYLGRESVVVLAHNGLCRLW HPDGALYKALRWPPAADGPLFMAAVLSHGLWATDSRTSIHAAVGRVLFGSLCAADADASAASDSDLASSPRRPHS SRLASGPDPHLTRSLLSAPSLHAELLPPSELWLSQLEKMVYNSTINPLTSLLRCPNNELLSSPTRSRIVNRLLSE TSRILTTLIALRAPVPLPPRFSPSDFAADSLRAKLDTFIPAVGPNHSSMLQHLRAGVQTEVRDFNGWLVETAADL VPGFDPRTHRILVELVEAAKADDAPWTDHQLGRLLLSSSPSSSLP |
Coding | >Ophio5|6172 ATGGCACGACCAGTACTGCTACGGCTGCACAGCACGACAAGTTCGTCCCCAGTTCGTTTTTTCCATTCGACCTCG GCTCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAAGTCGGCCACGACGAAGAAGCCCGGCTGGCTC ACGGCGCTCATGGACGCATCTCCCGGTGTAGGACCGCAGCTGTACGCCTGGAACGCAAGTAACGTCGAGACATGC ACGACGCCGGTTCCGCCTCCTTCGACGACCGAGAGTAGAGGACGAATCTACATCGTGGGCGGCGGTAATATCGGA CGCCTGTTCGCCATCTGTCTCGCTAGGCTATCCCTTCCCATCACCCTGGTGGTGAAGCGCACGACGCAGCTAGCA GACTACGCCTCCCACGGCATCCATCTCGTCAAGCCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCCTCGTCCTCC TCGTCCTCCTCTTGCAGCACAGGGTCGACCACGGCCCCGGTCTCGGTAGAGTACTGGTCAGAAACGCCGCCCGAC CACGGCCCCGTCCGTACCGTAGAACCGATACGGAACCTCATCGTCGCCACCAAGGCTTCCGCCGCCGTGCCGGCT ATAGATAGATTGCGGCGCTACCTCGGACGGGAGTCGGTCGTCGTCTTGGCTCATAATGGCCTCTGTCGACTTTGG CACCCAGACGGCGCCCTGTACAAGGCTTTGCGCTGGCCGCCCGCTGCTGACGGCCCGCTCTTTATGGCTGCTGTG CTTTCGCATGGCTTGTGGGCGACGGATTCGCGGACCAGTATCCATGCTGCCGTCGGACGGGTACTCTTTGGTTCC CTTTGTGCTGCTGATGCTGATGCTTCCGCCGCCTCCGACTCGGATCTTGCCTCCTCCCCCCGTCGTCCGCACTCT TCCCGTCTTGCCTCCGGCCCGGATCCCCATCTCACCCGCTCACTGCTCTCCGCCCCCTCTCTTCACGCCGAACTC CTCCCCCCCTCGGAGCTATGGCTAAGCCAGCTAGAGAAGATGGTGTACAATAGCACCATCAACCCGCTAACCTCC CTCCTGCGCTGCCCCAACAACGAGCTCCTCTCGTCCCCGACCAGGTCCCGAATCGTGAACCGCCTCCTGTCGGAA ACGAGCCGCATCCTCACCACCCTCATCGCCCTCCGCGCCCCCGTTCCCCTTCCCCCCCGTTTCTCCCCTTCCGAC TTCGCTGCCGATAGCCTTCGTGCTAAACTCGACACCTTCATCCCCGCTGTCGGCCCTAATCATAGCTCCATGTTG CAGCATCTTCGTGCCGGCGTCCAGACCGAGGTTCGCGACTTTAATGGCTGGCTGGTCGAGACCGCTGCTGACCTG GTCCCCGGCTTTGATCCCCGCACCCATCGCATCCTCGTCGAGCTGGTCGAGGCCGCTAAAGCGGACGATGCGCCT TGGACCGATCACCAACTCGGCCGTCTCTTGCTTTCTTCATCACCTTCTTCCTCTCTACCT |
Transcript | >Ophio5|6172 ATGGCACGACCAGTACTGCTACGGCTGCACAGCACGACAAGTTCGTCCCCAGTTCGTTTTTTCCATTCGACCTCG GCTCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAAGTCGGCCACGACGAAGAAGCCCGGCTGGCTC ACGGCGCTCATGGACGCATCTCCCGGTGTAGGACCGCAGCTGTACGCCTGGAACGCAAGTAACGTCGAGACATGC ACGACGCCGGTTCCGCCTCCTTCGACGACCGAGAGTAGAGGACGAATCTACATCGTGGGCGGCGGTAATATCGGA CGCCTGTTCGCCATCTGTCTCGCTAGGCTATCCCTTCCCATCACCCTGGTGGTGAAGCGCACGACGCAGCTAGCA GACTACGCCTCCCACGGCATCCATCTCGTCAAGCCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCCTCGTCCTCC TCGTCCTCCTCTTGCAGCACAGGGTCGACCACGGCCCCGGTCTCGGTAGAGTACTGGTCAGAAACGCCGCCCGAC CACGGCCCCGTCCGTACCGTAGAACCGATACGGAACCTCATCGTCGCCACCAAGGCTTCCGCCGCCGTGCCGGCT ATAGATAGATTGCGGCGCTACCTCGGACGGGAGTCGGTCGTCGTCTTGGCTCATAATGGCCTCTGTCGACTTTGG CACCCAGACGGCGCCCTGTACAAGGCTTTGCGCTGGCCGCCCGCTGCTGACGGCCCGCTCTTTATGGCTGCTGTG CTTTCGCATGGCTTGTGGGCGACGGATTCGCGGACCAGTATCCATGCTGCCGTCGGACGGGTACTCTTTGGTTCC CTTTGTGCTGCTGATGCTGATGCTTCCGCCGCCTCCGACTCGGATCTTGCCTCCTCCCCCCGTCGTCCGCACTCT TCCCGTCTTGCCTCCGGCCCGGATCCCCATCTCACCCGCTCACTGCTCTCCGCCCCCTCTCTTCACGCCGAACTC CTCCCCCCCTCGGAGCTATGGCTAAGCCAGCTAGAGAAGATGGTGTACAATAGCACCATCAACCCGCTAACCTCC CTCCTGCGCTGCCCCAACAACGAGCTCCTCTCGTCCCCGACCAGGTCCCGAATCGTGAACCGCCTCCTGTCGGAA ACGAGCCGCATCCTCACCACCCTCATCGCCCTCCGCGCCCCCGTTCCCCTTCCCCCCCGTTTCTCCCCTTCCGAC TTCGCTGCCGATAGCCTTCGTGCTAAACTCGACACCTTCATCCCCGCTGTCGGCCCTAATCATAGCTCCATGTTG CAGCATCTTCGTGCCGGCGTCCAGACCGAGGTTCGCGACTTTAATGGCTGGCTGGTCGAGACCGCTGCTGACCTG GTCCCCGGCTTTGATCCCCGCACCCATCGCATCCTCGTCGAGCTGGTCGAGGCCGCTAAAGCGGACGATGCGCCT TGGACCGATCACCAACTCGGCCGTCTCTTGCTTTCTTCATCACCTTCTTCCTCTCTACCTTGA |
Gene | >Ophio5|6172 ATGGCACGACCAGTACTGCTACGGCTGCACAGCACGACAAGTTCGTCCCCAGTTCGTTTTTTCCATTCGACCTCG GCTCCTCCTCGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAAGTCGGCCACGACGAAGAAGCCCGGCTGGCTC ACGGCGCTCATGGACGCATCTCCCGGTGTAGGACCGCAGCTGTACGCCTGGAACGCAAGTAACGTCGAGACATGC ACGACGCCGGTTCCGCCTCCTTCGACGACCGAGAGTAGAGGACGAATCTACATCGTGGGCGGCGGTAATATCGGA CGCCTGTTCGCCATCTGTCTCGCTAGGCTATCCCTTCCCATCACCCTGGTGGTGAAGCGCACGACGCAGCTAGCA GACTACGCCTCCCACGGCATCCATCTCGTCAAGCCCTCTTCCTCCTCTTCCTCTTCCTCCTCCTCCTCGTCCTCC TCGTCCTCCTCTTGCAGCACAGGGTCGACCACGGCCCCGGTCTCGGTAGAGTACTGGTCAGAAACGCCGCCCGAC CACGGCCCCGTCCGTACCGTAGAACCGATACGGAACCTCATCGTCGCCACCAAGGCTTCCGCCGCCGTGCCGGCT ATAGATAGATTGCGGCGCTACCTCGGACGGGAGTCGGTCGTCGTCTTGGCTCATAATGGCCTCTGTCGACTTTGG CACCCAGACGGCGCCCTGTACAAGGCTTTGCGCTGGCCGCCCGCTGCTGACGGCCCGCTCTTTATGGCTGCTGTG CTTTCGCATGGCTTGTGGGCGACGGATTCGCGGACCAGTATCCATGCTGCCGTCGGACGGGTACTCTTTGGTTCC CTTTGTGCTGCTGATGCTGATGCTTCCGCCGCCTCCGACTCGGATCTTGCCTCCTCCCCCCGTCGTCCGCACTCT TCCCGTCTTGCCTCCGGCCCGGATCCCCATCTCACCCGCTCACTGCTCTCCGCCCCCTCTCTTCACGCCGAACTC CTCCCCCCCTCGGAGCTATGGCTAAGCCAGCTAGAGAAGATGGTGTACAATAGCACCATCAACCCGCTAACCTCC CTCCTGCGCTGCCCCAACAACGAGCTCCTCTCGTCCCCGACCAGGTCCCGAATCGTGAACCGCCTCCTGTCGGAA ACGAGCCGCATCCTCACCACCCTCATCGCCCTCCGCGCCCCCGTTCCCCTTCCCCCCCGTTTCTCCCCTTCCGAC TTCGCTGCCGATAGCCTTCGTGCTAAACTCGACACCTTCATCCCCGCTGTCGGCCCTAATCATAGCTCCATGTTG CAGCATCTTCGTGCCGGCGTCCAGACCGAGGTTCGCGACTTTAATGGCTGGCTGGTCGAGACCGCTGCTGACCTG GTCCCCGGCTTTGATCCCCGCACCCATCGCATCCTCGTCGAGCTGGTCGAGGCCGCTAAAGCGGACGATGCGCCT TGGACCGATCACCAACTCGGCCGTCTCTTGCTTTCTTCATCACCTTCTTCCTCTCTACCTTGA |