Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|6110
Gene name
Location	scaffold_52:15531..16422
Strand	-
Gene length (bp)	891
Transcript length (bp)	891
Coding sequence length (bp)	888
Protein length (aa)	296

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10615	DUF2470	Domain of unknown function (DUF2470)	1.7E-17	80	152

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 62	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	179	201	22
2	221	240	19
3	252	274	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|6110 MAVSLPRETAKFFPPLPQKTIINSLTSQRQARLLPSLPIDDEDGSSSSRRSNPRPQARLRQARQVDAQAMASPAE EEIRDRIVRHMNQAHTRELSHLVRHFTGATASEAANPSLRDLTLQGMRVRAGGNDHVIPFSPALGDWTEARQRII AMDATARDSLGISDIYVTHYVGPRGFDRLIVFYVLMYVACFATLPYVVPGSRAWAAVDAVFPGGAPTYKWLVRVI SVPMLAVHSLETAIFDRKLRRHAIDRWTGLWWMWALDCFVEGVFAFWRLDAVVAEKRAAKEAKEAKEVKKS
Coding	>Ophio5\|6110 ATGGCAGTCTCTCTGCCTCGGGAGACGGCCAAGTTTTTCCCGCCCTTGCCACAGAAGACCATCATCAACAGCCTC ACGAGCCAAAGACAAGCTCGTTTGCTCCCGTCTCTGCCAATCGACGACGAAGACGGCAGCAGCAGCAGCAGAAGG AGCAACCCCAGACCACAGGCTCGCTTGAGACAGGCTCGGCAAGTCGACGCACAAGCCATGGCCTCGCCCGCCGAG GAAGAGATCCGCGACCGCATCGTCCGGCACATGAATCAGGCTCACACGCGCGAGCTCTCGCATCTGGTCCGACAC TTTACCGGCGCCACCGCCAGCGAGGCGGCCAACCCTTCGCTGCGTGACCTGACGCTGCAGGGCATGAGAGTGCGG GCCGGTGGAAACGACCATGTCATACCCTTCTCTCCCGCCCTCGGCGACTGGACTGAGGCCCGTCAACGCATCATC GCCATGGACGCCACCGCTCGCGATAGCCTCGGCATCAGCGACATCTACGTCACCCACTACGTCGGCCCGCGCGGC TTCGACCGGCTCATCGTCTTCTACGTCTTGATGTACGTCGCCTGCTTCGCCACCTTGCCCTACGTCGTCCCCGGC TCTCGCGCCTGGGCTGCCGTCGATGCCGTCTTTCCGGGCGGCGCTCCGACCTACAAGTGGCTGGTCCGTGTCATC AGCGTGCCCATGTTGGCCGTCCACTCGCTCGAGACGGCCATCTTCGATCGCAAGCTACGCAGACACGCCATCGAC CGCTGGACGGGTCTGTGGTGGATGTGGGCGTTGGACTGCTTCGTCGAGGGCGTCTTTGCCTTCTGGCGCCTCGAC GCCGTCGTCGCCGAGAAGAGGGCGGCCAAGGAGGCCAAGGAGGCCAAGGAGGTCAAGAAGTCG
Transcript	>Ophio5\|6110 ATGGCAGTCTCTCTGCCTCGGGAGACGGCCAAGTTTTTCCCGCCCTTGCCACAGAAGACCATCATCAACAGCCTC ACGAGCCAAAGACAAGCTCGTTTGCTCCCGTCTCTGCCAATCGACGACGAAGACGGCAGCAGCAGCAGCAGAAGG AGCAACCCCAGACCACAGGCTCGCTTGAGACAGGCTCGGCAAGTCGACGCACAAGCCATGGCCTCGCCCGCCGAG GAAGAGATCCGCGACCGCATCGTCCGGCACATGAATCAGGCTCACACGCGCGAGCTCTCGCATCTGGTCCGACAC TTTACCGGCGCCACCGCCAGCGAGGCGGCCAACCCTTCGCTGCGTGACCTGACGCTGCAGGGCATGAGAGTGCGG GCCGGTGGAAACGACCATGTCATACCCTTCTCTCCCGCCCTCGGCGACTGGACTGAGGCCCGTCAACGCATCATC GCCATGGACGCCACCGCTCGCGATAGCCTCGGCATCAGCGACATCTACGTCACCCACTACGTCGGCCCGCGCGGC TTCGACCGGCTCATCGTCTTCTACGTCTTGATGTACGTCGCCTGCTTCGCCACCTTGCCCTACGTCGTCCCCGGC TCTCGCGCCTGGGCTGCCGTCGATGCCGTCTTTCCGGGCGGCGCTCCGACCTACAAGTGGCTGGTCCGTGTCATC AGCGTGCCCATGTTGGCCGTCCACTCGCTCGAGACGGCCATCTTCGATCGCAAGCTACGCAGACACGCCATCGAC CGCTGGACGGGTCTGTGGTGGATGTGGGCGTTGGACTGCTTCGTCGAGGGCGTCTTTGCCTTCTGGCGCCTCGAC GCCGTCGTCGCCGAGAAGAGGGCGGCCAAGGAGGCCAAGGAGGCCAAGGAGGTCAAGAAGTCGTGA
Gene	>Ophio5\|6110 ATGGCAGTCTCTCTGCCTCGGGAGACGGCCAAGTTTTTCCCGCCCTTGCCACAGAAGACCATCATCAACAGCCTC ACGAGCCAAAGACAAGCTCGTTTGCTCCCGTCTCTGCCAATCGACGACGAAGACGGCAGCAGCAGCAGCAGAAGG AGCAACCCCAGACCACAGGCTCGCTTGAGACAGGCTCGGCAAGTCGACGCACAAGCCATGGCCTCGCCCGCCGAG GAAGAGATCCGCGACCGCATCGTCCGGCACATGAATCAGGCTCACACGCGCGAGCTCTCGCATCTGGTCCGACAC TTTACCGGCGCCACCGCCAGCGAGGCGGCCAACCCTTCGCTGCGTGACCTGACGCTGCAGGGCATGAGAGTGCGG GCCGGTGGAAACGACCATGTCATACCCTTCTCTCCCGCCCTCGGCGACTGGACTGAGGCCCGTCAACGCATCATC GCCATGGACGCCACCGCTCGCGATAGCCTCGGCATCAGCGACATCTACGTCACCCACTACGTCGGCCCGCGCGGC TTCGACCGGCTCATCGTCTTCTACGTCTTGATGTACGTCGCCTGCTTCGCCACCTTGCCCTACGTCGTCCCCGGC TCTCGCGCCTGGGCTGCCGTCGATGCCGTCTTTCCGGGCGGCGCTCCGACCTACAAGTGGCTGGTCCGTGTCATC AGCGTGCCCATGTTGGCCGTCCACTCGCTCGAGACGGCCATCTTCGATCGCAAGCTACGCAGACACGCCATCGAC CGCTGGACGGGTCTGTGGTGGATGTGGGCGTTGGACTGCTTCGTCGAGGGCGTCTTTGCCTTCTGGCGCCTCGAC GCCGTCGTCGCCGAGAAGAGGGCGGCCAAGGAGGCCAAGGAGGCCAAGGAGGTCAAGAAGTCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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