Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|611
Gene name
Locationscaffold_116:35657..37127
Strand+
Gene length (bp)1470
Transcript length (bp)1386
Coding sequence length (bp)1383
Protein length (aa) 461

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06432 GPI2 Phosphatidylinositol N-acetylglucosaminyltransferase 1.3E-135 60 446

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O59802|GPI2_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 259 450 5.0E-35
sp|Q54M40|PIGC_DICDI Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 275 451 4.0E-33
sp|Q92535|PIGC_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 265 449 5.0E-25
sp|Q5PQQ4|PIGC_RAT Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 267 449 6.0E-25
sp|Q9CXR4|PIGC_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 267 449 2.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|O59802|GPI2_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 259 450 5.0E-35
sp|Q54M40|PIGC_DICDI Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 275 451 4.0E-33
sp|Q92535|PIGC_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 265 449 5.0E-25
sp|Q5PQQ4|PIGC_RAT Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 267 449 6.0E-25
sp|Q9CXR4|PIGC_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 267 449 2.0E-24
sp|Q3ZBX1|PIGC_BOVIN Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1 267 449 2.0E-24
sp|O59802|GPI2_SCHPO Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi2 PE=3 SV=1 46 148 1.0E-15
sp|P46961|GPI2_YEAST Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI2 PE=1 SV=2 245 452 5.0E-13
sp|Q92535|PIGC_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Homo sapiens GN=PIGC PE=2 SV=1 53 148 2.0E-11
sp|Q5PQQ4|PIGC_RAT Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Rattus norvegicus GN=Pigc PE=2 SV=1 60 148 2.0E-11
sp|Q9CXR4|PIGC_MOUSE Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Mus musculus GN=Pigc PE=2 SV=1 60 148 2.0E-11
sp|Q3ZBX1|PIGC_BOVIN Phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Bos taurus GN=PIGC PE=2 SV=1 60 148 5.0E-11
sp|Q54M40|PIGC_DICDI Putative phosphatidylinositol N-acetylglucosaminyltransferase subunit C OS=Dictyostelium discoideum GN=pigC PE=3 SV=1 60 119 6.0E-09
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GO

GO Term Description Terminal node
GO:0006506 GPI anchor biosynthetic process Yes
GO:0016021 integral component of membrane Yes
GO:0006497 protein lipidation No
GO:0006793 phosphorus metabolic process No
GO:0046474 glycerophospholipid biosynthetic process No
GO:0046488 phosphatidylinositol metabolic process No
GO:0044237 cellular metabolic process No
GO:0008152 metabolic process No
GO:0006650 glycerophospholipid metabolic process No
GO:0043412 macromolecule modification No
GO:1901576 organic substance biosynthetic process No
GO:0006664 glycolipid metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008654 phospholipid biosynthetic process No
GO:0006644 phospholipid metabolic process No
GO:0031224 intrinsic component of membrane No
GO:0044238 primary metabolic process No
GO:0006796 phosphate-containing compound metabolic process No
GO:0009247 glycolipid biosynthetic process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008150 biological_process No
GO:0043170 macromolecule metabolic process No
GO:0008610 lipid biosynthetic process No
GO:0044255 cellular lipid metabolic process No
GO:0009058 biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0006661 phosphatidylinositol biosynthetic process No
GO:0090407 organophosphate biosynthetic process No
GO:0045017 glycerolipid biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:0046467 membrane lipid biosynthetic process No
GO:1901135 carbohydrate derivative metabolic process No
GO:0006643 membrane lipid metabolic process No
GO:0006505 GPI anchor metabolic process No
GO:0019637 organophosphate metabolic process No
GO:1901137 carbohydrate derivative biosynthetic process No
GO:0036211 protein modification process No
GO:0006629 lipid metabolic process No
GO:0005575 cellular_component No
GO:0019538 protein metabolic process No
GO:1903509 liposaccharide metabolic process No
GO:0009987 cellular process No
GO:0046486 glycerolipid metabolic process No
GO:0110165 cellular anatomical entity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 104 123 19
2 299 321 22
3 351 368 17
4 381 400 19
5 410 432 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|611
MPSPTDDEASMPAPSFARSHLSPHHATALSPPPPLPLLPRAVGEPLNHGRNRSRRRKRAWKKLMWVKQSYPDNYT
DQATFLENLQRNPRLKPYDFWPLVNDSTVILQHVCSVIIFIVCFVAIFQERVSPVSVVSCGSLATFLGWLLWERW
VAEEDLQDDVGVGVMVRSGSIRRRGRAASLRRPLRSDASPSTSTMTPATATTKAMAATGKLTSPTPDVRTWAAIP
AEPQAADAAAAAAAAAAAAGAPPCPPAPDPVEAPGVNRVHERLETIKSALLIFSTLLGLSPILKSLTRSTSSDSI
WAMSFWLLALNVFFFDYSGGVGAKFPASLSTNAALMASTVLASRLPSTKQVFSLTLFSIEVFGLFPVFRRHVRHR
SWRYHVVLTVLLVLGAGLGVGIVLGDGRWPGKSGSVGMVIGVVMAAIAAGGCSWWLIGLQKYKNEIRGPWDPARP
IIMSRTRWDSR
Coding >Ophio5|611
ATGCCGTCGCCGACCGACGATGAGGCTTCTATGCCGGCACCCTCGTTTGCGCGCTCGCACCTCTCGCCTCACCAT
GCGACAGCGCTCTCGCCTCCGCCGCCTCTTCCTCTGCTGCCGCGTGCCGTCGGCGAACCACTGAATCATGGTCGG
AATCGGAGTCGACGGAGGAAACGGGCGTGGAAGAAGCTGATGTGGGTGAAGCAGTCATATCCGGACAACTACACC
GATCAAGCTACCTTTCTCGAGAACCTACAGCGAAATCCGCGGCTTAAGCCGTACGACTTTTGGCCTTTGGTTAAT
GACTCGACCGTCATCTTGCAACATGTCTGCTCCGTCATCATCTTCATTGTCTGCTTCGTCGCCATCTTTCAAGAG
CGCGTCTCGCCTGTGTCCGTCGTCAGCTGTGGCAGTCTGGCTACCTTTCTCGGCTGGCTCTTGTGGGAGCGATGG
GTTGCCGAGGAGGATCTGCAGGATGATGTTGGTGTTGGCGTCATGGTTCGCAGTGGAAGCATTCGTCGAAGAGGT
CGTGCTGCCAGCCTTCGCCGTCCGCTGCGATCCGATGCGTCGCCCTCAACTTCGACCATGACGCCCGCGACGGCA
ACTACAAAGGCAATGGCGGCTACGGGAAAATTGACGAGTCCGACGCCCGACGTCAGGACTTGGGCGGCAATACCC
GCCGAGCCGCAGGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGGTGCTCCTCCCTGCCCG
CCGGCTCCGGACCCGGTCGAGGCCCCGGGTGTCAACCGGGTGCACGAGCGGCTCGAGACGATCAAGTCTGCGCTG
CTCATCTTCAGCACCTTGTTGGGCCTAAGCCCGATCCTCAAGTCTCTGACGCGGTCGACGTCGAGCGACAGCATC
TGGGCCATGTCCTTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCGGGTGGCGTGGGCGCCAAGTTC
CCGGCCTCTCTGTCGACCAATGCGGCGCTGATGGCGTCGACGGTCCTGGCCAGCCGTCTGCCGTCGACGAAACAG
GTCTTTAGCCTGACGCTCTTCAGCATCGAGGTCTTCGGCCTCTTCCCCGTCTTCCGTCGCCACGTGCGCCATCGC
AGCTGGAGGTATCACGTCGTGCTGACGGTGCTACTGGTGTTGGGGGCCGGACTGGGCGTCGGCATCGTCCTCGGC
GACGGGCGATGGCCCGGCAAGAGCGGCTCGGTCGGCATGGTCATCGGCGTCGTCATGGCCGCCATCGCCGCCGGC
GGTTGCAGCTGGTGGCTGATTGGGCTCCAAAAATACAAGAATGAGATTCGCGGGCCTTGGGATCCGGCGAGGCCC
ATCATCATGAGCAGGACACGGTGGGACAGCCGG
Transcript >Ophio5|611
ATGCCGTCGCCGACCGACGATGAGGCTTCTATGCCGGCACCCTCGTTTGCGCGCTCGCACCTCTCGCCTCACCAT
GCGACAGCGCTCTCGCCTCCGCCGCCTCTTCCTCTGCTGCCGCGTGCCGTCGGCGAACCACTGAATCATGGTCGG
AATCGGAGTCGACGGAGGAAACGGGCGTGGAAGAAGCTGATGTGGGTGAAGCAGTCATATCCGGACAACTACACC
GATCAAGCTACCTTTCTCGAGAACCTACAGCGAAATCCGCGGCTTAAGCCGTACGACTTTTGGCCTTTGGTTAAT
GACTCGACCGTCATCTTGCAACATGTCTGCTCCGTCATCATCTTCATTGTCTGCTTCGTCGCCATCTTTCAAGAG
CGCGTCTCGCCTGTGTCCGTCGTCAGCTGTGGCAGTCTGGCTACCTTTCTCGGCTGGCTCTTGTGGGAGCGATGG
GTTGCCGAGGAGGATCTGCAGGATGATGTTGGTGTTGGCGTCATGGTTCGCAGTGGAAGCATTCGTCGAAGAGGT
CGTGCTGCCAGCCTTCGCCGTCCGCTGCGATCCGATGCGTCGCCCTCAACTTCGACCATGACGCCCGCGACGGCA
ACTACAAAGGCAATGGCGGCTACGGGAAAATTGACGAGTCCGACGCCCGACGTCAGGACTTGGGCGGCAATACCC
GCCGAGCCGCAGGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGGTGCTCCTCCCTGCCCG
CCGGCTCCGGACCCGGTCGAGGCCCCGGGTGTCAACCGGGTGCACGAGCGGCTCGAGACGATCAAGTCTGCGCTG
CTCATCTTCAGCACCTTGTTGGGCCTAAGCCCGATCCTCAAGTCTCTGACGCGGTCGACGTCGAGCGACAGCATC
TGGGCCATGTCCTTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCGGGTGGCGTGGGCGCCAAGTTC
CCGGCCTCTCTGTCGACCAATGCGGCGCTGATGGCGTCGACGGTCCTGGCCAGCCGTCTGCCGTCGACGAAACAG
GTCTTTAGCCTGACGCTCTTCAGCATCGAGGTCTTCGGCCTCTTCCCCGTCTTCCGTCGCCACGTGCGCCATCGC
AGCTGGAGGTATCACGTCGTGCTGACGGTGCTACTGGTGTTGGGGGCCGGACTGGGCGTCGGCATCGTCCTCGGC
GACGGGCGATGGCCCGGCAAGAGCGGCTCGGTCGGCATGGTCATCGGCGTCGTCATGGCCGCCATCGCCGCCGGC
GGTTGCAGCTGGTGGCTGATTGGGCTCCAAAAATACAAGAATGAGATTCGCGGGCCTTGGGATCCGGCGAGGCCC
ATCATCATGAGCAGGACACGGTGGGACAGCCGGTGA
Gene >Ophio5|611
ATGCCGTCGCCGACCGACGATGAGGCTTCTATGCCGGCACCCTCGTTTGCGCGCTCGCACCTCTCGCCTCACCAT
GCGACAGCGCTCTCGCCTCCGCCGCCTCTTCCTCTGCTGCCGCGTGCCGTCGGCGAACCACTGAATCATGGTCGG
AATCGGAGTCGACGGAGGAAACGGGCGTGGAAGAAGCTGATGTGGGTGAAGCAGTCATGTACGTGCGCGTTTTAT
TTTTCCTCCATCTTCCTCTTTATCTTTCCCCTTCGGTTTAGCTTCATGTGCTGACTTGGTTGTTTAGATCCGGAC
AACTACACCGATCAAGCTACCTTTCTCGAGAACCTACAGCGAAATCCGCGGCTTAAGCCGTACGACTTTTGGCCT
TTGGTTAATGACTCGACCGTCATCTTGCAACATGTCTGCTCCGTCATCATCTTCATTGTCTGCTTCGTCGCCATC
TTTCAAGAGCGCGTCTCGCCTGTGTCCGTCGTCAGCTGTGGCAGTCTGGCTACCTTTCTCGGCTGGCTCTTGTGG
GAGCGATGGGTTGCCGAGGAGGATCTGCAGGATGATGTTGGTGTTGGCGTCATGGTTCGCAGTGGAAGCATTCGT
CGAAGAGGTCGTGCTGCCAGCCTTCGCCGTCCGCTGCGATCCGATGCGTCGCCCTCAACTTCGACCATGACGCCC
GCGACGGCAACTACAAAGGCAATGGCGGCTACGGGAAAATTGACGAGTCCGACGCCCGACGTCAGGACTTGGGCG
GCAATACCCGCCGAGCCGCAGGCTGCTGATGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGGTGCTCCT
CCCTGCCCGCCGGCTCCGGACCCGGTCGAGGCCCCGGGTGTCAACCGGGTGCACGAGCGGCTCGAGACGATCAAG
TCTGCGCTGCTCATCTTCAGCACCTTGTTGGGCCTAAGCCCGATCCTCAAGTCTCTGACGCGGTCGACGTCGAGC
GACAGCATCTGGGCCATGTCCTTCTGGCTGCTGGCCCTCAACGTCTTCTTCTTCGACTACTCGGGTGGCGTGGGC
GCCAAGTTCCCGGCCTCTCTGTCGACCAATGCGGCGCTGATGGCGTCGACGGTCCTGGCCAGCCGTCTGCCGTCG
ACGAAACAGGTCTTTAGCCTGACGCTCTTCAGCATCGAGGTCTTCGGCCTCTTCCCCGTCTTCCGTCGCCACGTG
CGCCATCGCAGCTGGAGGTATCACGTCGTGCTGACGGTGCTACTGGTGTTGGGGGCCGGACTGGGCGTCGGCATC
GTCCTCGGCGACGGGCGATGGCCCGGCAAGAGCGGCTCGGTCGGCATGGTCATCGGCGTCGTCATGGCCGCCATC
GCCGCCGGCGGTTGCAGCTGGTGGCTGATTGGGCTCCAAAAATACAAGAATGAGATTCGCGGGCCTTGGGATCCG
GCGAGGCCCATCATCATGAGCAGGACACGGTGGGACAGCCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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