© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|6109 |
| Gene name | |
| Location | scaffold_52:13843..15385 |
| Strand | + |
| Gene length (bp) | 1542 |
| Transcript length (bp) | 1542 |
| Coding sequence length (bp) | 1539 |
| Protein length (aa) | 513 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13738 | Pyr_redox_3 | Pyridine nucleotide-disulphide oxidoreductase | 4.7E-10 | 46 | 238 |
| PF07992 | Pyr_redox_2 | Pyridine nucleotide-disulphide oxidoreductase | 2.9E-08 | 43 | 237 |
| PF00743 | FMO-like | Flavin-binding monooxygenase-like | 3.0E-06 | 156 | 356 |
| PF13434 | Lys_Orn_oxgnase | L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase | 3.3E-07 | 124 | 237 |
| PF13450 | NAD_binding_8 | NAD(P)-binding Rossmann-like domain | 2.2E-05 | 46 | 90 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P9WNG1|Y892_MYCTU | Uncharacterized monooxygenase Rv0892 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0892 PE=1 SV=1 | 38 | 241 | 2.0E-20 |
| sp|P9WNG0|Y892_MYCTO | Uncharacterized monooxygenase MT0916 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0916 PE=3 SV=1 | 38 | 241 | 2.0E-20 |
| sp|P64746|Y916_MYCBO | Uncharacterized monooxygenase Mb0916 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0916 PE=3 SV=1 | 38 | 241 | 2.0E-20 |
| sp|Q9I3H5|BVMO_PSEAE | Baeyer-Villiger monooxygenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1538 PE=1 SV=1 | 27 | 242 | 4.0E-17 |
| sp|P49109|FMO5_CAVPO | Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Cavia porcellus GN=FMO5 PE=2 SV=2 | 41 | 463 | 1.0E-16 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P9WNG1|Y892_MYCTU | Uncharacterized monooxygenase Rv0892 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv0892 PE=1 SV=1 | 38 | 241 | 2.0E-20 |
| sp|P9WNG0|Y892_MYCTO | Uncharacterized monooxygenase MT0916 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT0916 PE=3 SV=1 | 38 | 241 | 2.0E-20 |
| sp|P64746|Y916_MYCBO | Uncharacterized monooxygenase Mb0916 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0916 PE=3 SV=1 | 38 | 241 | 2.0E-20 |
| sp|Q9I3H5|BVMO_PSEAE | Baeyer-Villiger monooxygenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=PA1538 PE=1 SV=1 | 27 | 242 | 4.0E-17 |
| sp|P49109|FMO5_CAVPO | Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Cavia porcellus GN=FMO5 PE=2 SV=2 | 41 | 463 | 1.0E-16 |
| sp|P97872|FMO5_MOUSE | Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Mus musculus GN=Fmo5 PE=1 SV=4 | 41 | 444 | 1.0E-16 |
| sp|Q93TJ5|HAPMO_PSEFL | 4-hydroxyacetophenone monooxygenase OS=Pseudomonas fluorescens GN=hapE PE=1 SV=1 | 6 | 241 | 8.0E-15 |
| sp|P17635|FMO2_RABIT | Dimethylaniline monooxygenase [N-oxide-forming] 2 OS=Oryctolagus cuniculus GN=FMO2 PE=1 SV=3 | 43 | 403 | 5.0E-14 |
| sp|Q04799|FMO5_RABIT | Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Oryctolagus cuniculus GN=FMO5 PE=1 SV=2 | 43 | 392 | 7.0E-14 |
| sp|Q9RKB5|BVMO2_STRCO | Baeyer-Villiger monooxygenase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=SCO3172 PE=1 SV=1 | 43 | 242 | 1.0E-13 |
| sp|H3JQW0|OTEMO_PSEPU | 2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase OS=Pseudomonas putida GN=otemo PE=1 SV=1 | 46 | 241 | 2.0E-12 |
| sp|P55487|Y4ID_RHISN | Uncharacterized monooxygenase y4iD OS=Rhizobium sp. (strain NGR234) GN=NGR_a03290 PE=3 SV=1 | 43 | 241 | 3.0E-12 |
| sp|Q9FVQ0|YUC10_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA10 OS=Arabidopsis thaliana GN=YUC10 PE=2 SV=1 | 44 | 369 | 2.0E-11 |
| sp|Q8GAW0|CPMO_COMS9 | Cyclopentanone 1,2-monooxygenase OS=Comamonas sp. (strain NCIMB 9872) GN=cpnB PE=1 SV=3 | 36 | 241 | 2.0E-11 |
| sp|P49326|FMO5_HUMAN | Dimethylaniline monooxygenase [N-oxide-forming] 5 OS=Homo sapiens GN=FMO5 PE=1 SV=2 | 41 | 392 | 3.0E-11 |
| sp|Q9LFM5|YUC4_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA4 OS=Arabidopsis thaliana GN=YUC4 PE=1 SV=1 | 42 | 368 | 3.0E-11 |
| sp|P9WNF9|ETHA_MYCTU | FAD-containing monooxygenase EthA OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=ethA PE=1 SV=1 | 44 | 355 | 2.0E-10 |
| sp|Q7TVI2|ETHA_MYCBO | FAD-containing monooxygenase EthA OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ethA PE=1 SV=1 | 44 | 355 | 2.0E-10 |
| sp|P9WNF8|ETHA_MYCTO | FAD-containing monooxygenase EthA OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=ethA PE=3 SV=1 | 44 | 355 | 2.0E-10 |
| sp|O49312|YUC7_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA7 OS=Arabidopsis thaliana GN=YUC7 PE=2 SV=1 | 46 | 366 | 9.0E-10 |
| sp|O23024|YUC3_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA3 OS=Arabidopsis thaliana GN=YUC3 PE=2 SV=1 | 46 | 368 | 2.0E-09 |
| sp|Q9SVU0|YUC8_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA8 OS=Arabidopsis thaliana GN=YUC8 PE=2 SV=1 | 46 | 356 | 3.0E-09 |
| sp|Q9LMA1|FMO1_ARATH | Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1 | 43 | 242 | 7.0E-09 |
| sp|A7HU16|BVMO_PARL1 | Baeyer-Villiger monooxygenase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=Plav_1781 PE=1 SV=1 | 36 | 241 | 2.0E-08 |
| sp|Q9SZY8|YUC1_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA1 OS=Arabidopsis thaliana GN=YUC1 PE=1 SV=1 | 34 | 356 | 4.0E-08 |
| sp|Q9C8U0|GSXL5_ARATH | Flavin-containing monooxygenase FMO GS-OX-like 5 OS=Arabidopsis thaliana GN=At1g63370 PE=2 SV=2 | 34 | 235 | 9.0E-08 |
| sp|Q9SXE1|GSOX3_ARATH | Flavin-containing monooxygenase FMO GS-OX3 OS=Arabidopsis thaliana GN=FMOGS-OX3 PE=2 SV=1 | 34 | 243 | 9.0E-08 |
| sp|Q47PU3|PAMO_THEFY | Phenylacetone monooxygenase OS=Thermobifida fusca (strain YX) GN=pamO PE=1 SV=1 | 29 | 241 | 3.0E-07 |
| sp|Q9SXD5|GSXL3_ARATH | Flavin-containing monooxygenase FMO GS-OX-like 3 OS=Arabidopsis thaliana GN=At1g62620 PE=2 SV=2 | 34 | 235 | 4.0E-07 |
| sp|Q8MP06|SNO1_TYRJA | Senecionine N-oxygenase OS=Tyria jacobaeae GN=sno1 PE=1 SV=1 | 43 | 218 | 5.0E-07 |
| sp|Q9LKC0|YUC5_ARATH | Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana GN=YUC5 PE=2 SV=1 | 46 | 356 | 6.0E-07 |
| sp|Q9FF12|GSXL9_ARATH | Flavin-containing monooxygenase FMO GS-OX-like 9 OS=Arabidopsis thaliana GN=At5g07800 PE=2 SV=1 | 39 | 235 | 7.0E-07 |
| sp|Q9SS04|GSOX1_ARATH | Flavin-containing monooxygenase FMO GS-OX1 OS=Arabidopsis thaliana GN=FMOGS-OX1 PE=2 SV=1 | 34 | 237 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0050661 | NADP binding | Yes |
| GO:0004499 | N,N-dimethylaniline monooxygenase activity | Yes |
| GO:0004497 | monooxygenase activity | No |
| GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0005488 | binding | No |
| GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0003674 | molecular_function | No |
| GO:0043167 | ion binding | No |
| GO:0043168 | anion binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Endoplasmic reticulum | Peroxisomal targeting signal | 0.3992 | 0.2448 | 0.1334 | 0.1052 | 0.4053 | 0.141 | 0.728 | 0.2985 | 0.4218 | 0.6504 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 446 | 468 | 22 |
| 2 | 475 | 492 | 17 |
| Orthofinder run ID | 4 |
| Orthogroup | 3435 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|6109 MPLKSQPALDNPFTLLYQLLQWLVGKALSPRPPPANGTAQRPRIAVIGAGITGVTAASHICGHGFDAVIFEAGPE EHVGGIWSRVNDTSGLQIHSLMYRFHPSVSWQQGYPDRGQIVAEVRRLWARYGLRDKTRFNVRVESVYRDGGSWI VNDPENGRFDGVVVAVGTCGDVKMPPLAGADKFVGPVLHSSELSARAIDVTNKQVAIVGGGASAVEALEFAIAHK AARVTVLSRSEKWIIPRDVIVDALLSFNILGRETCLSWIPEWILRRFFYGPELEELSPPSDKGFFTDTPMVNSDI MTRLRDGRARWLRGDIEMLTEHAVVVNRRARGVPKNGPGHHESVVADVVVMATGFRRPSLSMLPDDCFVEPYQCP NWYLQTFPPQHPSVSAINCTFVNAVGSVGNWHIGIYTRILLMFLVDPLTRPSPVWMRRWIDMTRFLKRGSPTAAF DFFTYLELLWWFVFCVCFNPFRWKWAVFVFLGVGLGLPRAVTRREERLLNLQGYRLRDQGSSI |
| Coding | >Ophio5|6109 ATGCCGCTCAAGTCGCAGCCCGCCCTCGATAACCCCTTCACCTTGCTGTACCAGCTGCTTCAATGGCTGGTAGGA AAAGCCCTCTCACCGCGGCCACCACCGGCCAACGGAACGGCTCAGCGGCCGCGCATCGCCGTCATCGGAGCCGGC ATCACGGGCGTGACGGCGGCCTCTCACATCTGCGGCCACGGCTTCGACGCCGTCATTTTCGAGGCCGGGCCCGAG GAACACGTGGGCGGTATCTGGAGCCGGGTCAACGACACGTCGGGCCTACAGATTCATAGCCTCATGTATCGCTTC CACCCGTCCGTCTCTTGGCAGCAGGGCTATCCGGACCGAGGCCAGATTGTGGCCGAGGTGCGCCGGCTGTGGGCG CGGTACGGGCTGCGAGATAAGACTCGCTTCAACGTCCGGGTCGAGAGCGTCTATCGCGATGGCGGCAGCTGGATC GTCAATGACCCGGAGAATGGACGGTTCGATGGCGTCGTCGTCGCTGTAGGGACCTGCGGAGACGTCAAGATGCCG CCCCTGGCCGGAGCGGACAAGTTCGTTGGGCCCGTCCTTCACTCGAGCGAGCTCTCGGCCCGAGCCATCGACGTG ACCAACAAGCAGGTGGCCATCGTCGGGGGCGGCGCCAGCGCAGTGGAAGCGCTCGAATTCGCCATAGCGCACAAG GCGGCGCGCGTGACGGTGCTCTCTCGATCCGAGAAATGGATCATCCCGCGAGACGTCATCGTCGACGCACTGCTG AGCTTCAATATCCTCGGCCGAGAGACGTGTCTGTCGTGGATCCCCGAGTGGATTCTGCGTCGCTTCTTCTACGGC CCCGAGCTCGAGGAGCTGTCGCCGCCGTCGGACAAGGGCTTCTTCACCGACACGCCCATGGTCAACTCGGACATC ATGACCCGTCTGCGCGATGGACGTGCTCGCTGGCTGCGCGGCGACATTGAGATGCTGACGGAGCATGCCGTCGTC GTCAATCGTCGGGCCAGGGGCGTGCCCAAGAACGGCCCCGGCCATCACGAGAGCGTCGTCGCCGACGTTGTCGTC ATGGCTACCGGCTTCCGTCGTCCCTCGCTGTCTATGCTGCCGGACGACTGCTTTGTCGAGCCTTACCAGTGCCCC AACTGGTATCTGCAGACGTTTCCGCCCCAGCACCCGTCCGTTTCGGCCATCAACTGCACTTTTGTCAACGCCGTC GGCTCTGTCGGCAATTGGCACATTGGCATCTACACTCGCATCTTGCTCATGTTCCTTGTCGACCCGCTCACGCGG CCGAGCCCGGTCTGGATGCGCCGCTGGATCGACATGACGCGCTTCCTCAAGCGCGGCAGCCCGACGGCCGCCTTT GACTTCTTCACCTATCTCGAGCTGCTGTGGTGGTTCGTCTTTTGCGTCTGCTTCAACCCCTTTCGCTGGAAGTGG GCAGTCTTTGTCTTCCTGGGTGTAGGCCTGGGCCTGCCCCGTGCTGTGACGAGGCGTGAGGAAAGGCTGCTGAAT TTGCAGGGCTACCGTCTTCGGGATCAGGGCTCCAGCATC |
| Transcript | >Ophio5|6109 ATGCCGCTCAAGTCGCAGCCCGCCCTCGATAACCCCTTCACCTTGCTGTACCAGCTGCTTCAATGGCTGGTAGGA AAAGCCCTCTCACCGCGGCCACCACCGGCCAACGGAACGGCTCAGCGGCCGCGCATCGCCGTCATCGGAGCCGGC ATCACGGGCGTGACGGCGGCCTCTCACATCTGCGGCCACGGCTTCGACGCCGTCATTTTCGAGGCCGGGCCCGAG GAACACGTGGGCGGTATCTGGAGCCGGGTCAACGACACGTCGGGCCTACAGATTCATAGCCTCATGTATCGCTTC CACCCGTCCGTCTCTTGGCAGCAGGGCTATCCGGACCGAGGCCAGATTGTGGCCGAGGTGCGCCGGCTGTGGGCG CGGTACGGGCTGCGAGATAAGACTCGCTTCAACGTCCGGGTCGAGAGCGTCTATCGCGATGGCGGCAGCTGGATC GTCAATGACCCGGAGAATGGACGGTTCGATGGCGTCGTCGTCGCTGTAGGGACCTGCGGAGACGTCAAGATGCCG CCCCTGGCCGGAGCGGACAAGTTCGTTGGGCCCGTCCTTCACTCGAGCGAGCTCTCGGCCCGAGCCATCGACGTG ACCAACAAGCAGGTGGCCATCGTCGGGGGCGGCGCCAGCGCAGTGGAAGCGCTCGAATTCGCCATAGCGCACAAG GCGGCGCGCGTGACGGTGCTCTCTCGATCCGAGAAATGGATCATCCCGCGAGACGTCATCGTCGACGCACTGCTG AGCTTCAATATCCTCGGCCGAGAGACGTGTCTGTCGTGGATCCCCGAGTGGATTCTGCGTCGCTTCTTCTACGGC CCCGAGCTCGAGGAGCTGTCGCCGCCGTCGGACAAGGGCTTCTTCACCGACACGCCCATGGTCAACTCGGACATC ATGACCCGTCTGCGCGATGGACGTGCTCGCTGGCTGCGCGGCGACATTGAGATGCTGACGGAGCATGCCGTCGTC GTCAATCGTCGGGCCAGGGGCGTGCCCAAGAACGGCCCCGGCCATCACGAGAGCGTCGTCGCCGACGTTGTCGTC ATGGCTACCGGCTTCCGTCGTCCCTCGCTGTCTATGCTGCCGGACGACTGCTTTGTCGAGCCTTACCAGTGCCCC AACTGGTATCTGCAGACGTTTCCGCCCCAGCACCCGTCCGTTTCGGCCATCAACTGCACTTTTGTCAACGCCGTC GGCTCTGTCGGCAATTGGCACATTGGCATCTACACTCGCATCTTGCTCATGTTCCTTGTCGACCCGCTCACGCGG CCGAGCCCGGTCTGGATGCGCCGCTGGATCGACATGACGCGCTTCCTCAAGCGCGGCAGCCCGACGGCCGCCTTT GACTTCTTCACCTATCTCGAGCTGCTGTGGTGGTTCGTCTTTTGCGTCTGCTTCAACCCCTTTCGCTGGAAGTGG GCAGTCTTTGTCTTCCTGGGTGTAGGCCTGGGCCTGCCCCGTGCTGTGACGAGGCGTGAGGAAAGGCTGCTGAAT TTGCAGGGCTACCGTCTTCGGGATCAGGGCTCCAGCATCTGA |
| Gene | >Ophio5|6109 ATGCCGCTCAAGTCGCAGCCCGCCCTCGATAACCCCTTCACCTTGCTGTACCAGCTGCTTCAATGGCTGGTAGGA AAAGCCCTCTCACCGCGGCCACCACCGGCCAACGGAACGGCTCAGCGGCCGCGCATCGCCGTCATCGGAGCCGGC ATCACGGGCGTGACGGCGGCCTCTCACATCTGCGGCCACGGCTTCGACGCCGTCATTTTCGAGGCCGGGCCCGAG GAACACGTGGGCGGTATCTGGAGCCGGGTCAACGACACGTCGGGCCTACAGATTCATAGCCTCATGTATCGCTTC CACCCGTCCGTCTCTTGGCAGCAGGGCTATCCGGACCGAGGCCAGATTGTGGCCGAGGTGCGCCGGCTGTGGGCG CGGTACGGGCTGCGAGATAAGACTCGCTTCAACGTCCGGGTCGAGAGCGTCTATCGCGATGGCGGCAGCTGGATC GTCAATGACCCGGAGAATGGACGGTTCGATGGCGTCGTCGTCGCTGTAGGGACCTGCGGAGACGTCAAGATGCCG CCCCTGGCCGGAGCGGACAAGTTCGTTGGGCCCGTCCTTCACTCGAGCGAGCTCTCGGCCCGAGCCATCGACGTG ACCAACAAGCAGGTGGCCATCGTCGGGGGCGGCGCCAGCGCAGTGGAAGCGCTCGAATTCGCCATAGCGCACAAG GCGGCGCGCGTGACGGTGCTCTCTCGATCCGAGAAATGGATCATCCCGCGAGACGTCATCGTCGACGCACTGCTG AGCTTCAATATCCTCGGCCGAGAGACGTGTCTGTCGTGGATCCCCGAGTGGATTCTGCGTCGCTTCTTCTACGGC CCCGAGCTCGAGGAGCTGTCGCCGCCGTCGGACAAGGGCTTCTTCACCGACACGCCCATGGTCAACTCGGACATC ATGACCCGTCTGCGCGATGGACGTGCTCGCTGGCTGCGCGGCGACATTGAGATGCTGACGGAGCATGCCGTCGTC GTCAATCGTCGGGCCAGGGGCGTGCCCAAGAACGGCCCCGGCCATCACGAGAGCGTCGTCGCCGACGTTGTCGTC ATGGCTACCGGCTTCCGTCGTCCCTCGCTGTCTATGCTGCCGGACGACTGCTTTGTCGAGCCTTACCAGTGCCCC AACTGGTATCTGCAGACGTTTCCGCCCCAGCACCCGTCCGTTTCGGCCATCAACTGCACTTTTGTCAACGCCGTC GGCTCTGTCGGCAATTGGCACATTGGCATCTACACTCGCATCTTGCTCATGTTCCTTGTCGACCCGCTCACGCGG CCGAGCCCGGTCTGGATGCGCCGCTGGATCGACATGACGCGCTTCCTCAAGCGCGGCAGCCCGACGGCCGCCTTT GACTTCTTCACCTATCTCGAGCTGCTGTGGTGGTTCGTCTTTTGCGTCTGCTTCAACCCCTTTCGCTGGAAGTGG GCAGTCTTTGTCTTCCTGGGTGTAGGCCTGGGCCTGCCCCGTGCTGTGACGAGGCGTGAGGAAAGGCTGCTGAAT TTGCAGGGCTACCGTCTTCGGGATCAGGGCTCCAGCATCTGA |