Protein ID | Ophio5|607 |
Gene name | |
Location | scaffold_116:24231..25705 |
Strand | - |
Gene length (bp) | 1474 |
Transcript length (bp) | 1428 |
Coding sequence length (bp) | 1425 |
Protein length (aa) | 475 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
Yes | 1 - 25 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 0.00 | 0.0 | 0.00 |
CcL | In ants, during behavior modification | 1.37 | 0.0 | 2.79 |
CcD | In ants, recently dead | 0.53 | 0.0 | 1.15 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 1.0 | no |
SC16a | CcD | 1.0 | no |
CcL | CcD | 1.0 | no |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|607 MAAIKSISWSLAAVLLNSPFIVNAEKVNVRPLGKDVTIKGNSVSWVGPDGFEDSFQCRDPRILCLTADKKMAACC EDKNLLKGSLDTGFYCCAEGHDLAGSKEVGFSCCPTGQQFDGKVCKLVCSNGKLLVDGKCACPNDQEEAADGSCK PASKCTSGLRTGDLLKPPFSSSSTGQTGRRLAYKNKQYSETMPHKDAIPGKFQLCRDEKCTPNLPVNPDHGIRIR DVHGSPPDAADANQWLNNASGGNHLGKTANYANAGNFTITKWPCGKYCLSGLQKGLGPACPNEDPSITFYRTLSE ACVEYELLEVPCKIRDKANNCIWKNSKNQCCGSKVDCTEANDDATPEPSPQPSASSPPSASSPSSTQNAPPSVTK PASDQVCPGLDGSTLEAGGIGFRVRCGWYYAAKDKLEEKKNVKDPLSCHAKCVADSKCQGANFDFSSFYCAHQID WAAEMKDSGNATGCVTFHPTKPRPI |
Coding | >Ophio5|607 ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGGC CAGACCGGACGTCGGCTGGCGTACAAGAACAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGC AAATTCCAGCTTTGCCGAGACGAGAAATGCACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGA GACGTGCACGGCTCTCCCCCGGACGCTGCCGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTG GGCAAGACGGCTAATTATGCCAACGCTGGCAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGC GGATTGCAGAAAGGACTCGGACCGGCCTGTCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAG GCCTGCGTCGAGTACGAGTTGCTAGAGGTTCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAAC AGCAAGAATCAGTGCTGCGGTAGTAAGGTCGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCC CAGCCCTCGGCCTCGTCACCGCCCTCGGCTTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAG CCGGCCAGTGACCAGGTCTGCCCGGGTCTGGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGT TGCGGTTGGTACTATGCGGCCAAGGATAAGCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCG AAATGCGTCGCCGACAGCAAGTGTCAAGGCGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGAC TGGGCGGCCGAGATGAAGGACAGCGGAAATGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATC |
Transcript | >Ophio5|607 ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGGC CAGACCGGACGTCGGCTGGCGTACAAGAACAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGC AAATTCCAGCTTTGCCGAGACGAGAAATGCACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGA GACGTGCACGGCTCTCCCCCGGACGCTGCCGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTG GGCAAGACGGCTAATTATGCCAACGCTGGCAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGC GGATTGCAGAAAGGACTCGGACCGGCCTGTCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAG GCCTGCGTCGAGTACGAGTTGCTAGAGGTTCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAAC AGCAAGAATCAGTGCTGCGGTAGTAAGGTCGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCC CAGCCCTCGGCCTCGTCACCGCCCTCGGCTTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAG CCGGCCAGTGACCAGGTCTGCCCGGGTCTGGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGT TGCGGTTGGTACTATGCGGCCAAGGATAAGCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCG AAATGCGTCGCCGACAGCAAGTGTCAAGGCGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGAC TGGGCGGCCGAGATGAAGGACAGCGGAAATGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATC TAA |
Gene | >Ophio5|607 ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGTC AGTCTGACGGAAGACGTGTGTAGGAAAATGCTACATGTTCCAGGGCCAGACCGGACGTCGGCTGGCGTACAAGAA CAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGCAAATTCCAGCTTTGCCGAGACGAGAAATG CACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGAGACGTGCACGGCTCTCCCCCGGACGCTGC CGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTGGGCAAGACGGCTAATTATGCCAACGCTGG CAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGCGGATTGCAGAAAGGACTCGGACCGGCCTG TCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAGGCCTGCGTCGAGTACGAGTTGCTAGAGGT TCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAACAGCAAGAATCAGTGCTGCGGTAGTAAGGT CGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCCCAGCCCTCGGCCTCGTCACCGCCCTCGGC TTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAGCCGGCCAGTGACCAGGTCTGCCCGGGTCT GGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGTTGCGGTTGGTACTATGCGGCCAAGGATAA GCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCGAAATGCGTCGCCGACAGCAAGTGTCAAGG CGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGACTGGGCGGCCGAGATGAAGGACAGCGGAAA TGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATCTAA |