Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|607
Gene name
Locationscaffold_116:24231..25705
Strand-
Gene length (bp)1474
Transcript length (bp)1428
Coding sequence length (bp)1425
Protein length (aa) 475

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 0.00 0.0 0.00
CcL In ants, during behavior modification 1.37 0.0 2.79
CcD In ants, recently dead 0.53 0.0 1.15

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 1.0 no
SC16a CcD 1.0 no
CcL CcD 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|607
MAAIKSISWSLAAVLLNSPFIVNAEKVNVRPLGKDVTIKGNSVSWVGPDGFEDSFQCRDPRILCLTADKKMAACC
EDKNLLKGSLDTGFYCCAEGHDLAGSKEVGFSCCPTGQQFDGKVCKLVCSNGKLLVDGKCACPNDQEEAADGSCK
PASKCTSGLRTGDLLKPPFSSSSTGQTGRRLAYKNKQYSETMPHKDAIPGKFQLCRDEKCTPNLPVNPDHGIRIR
DVHGSPPDAADANQWLNNASGGNHLGKTANYANAGNFTITKWPCGKYCLSGLQKGLGPACPNEDPSITFYRTLSE
ACVEYELLEVPCKIRDKANNCIWKNSKNQCCGSKVDCTEANDDATPEPSPQPSASSPPSASSPSSTQNAPPSVTK
PASDQVCPGLDGSTLEAGGIGFRVRCGWYYAAKDKLEEKKNVKDPLSCHAKCVADSKCQGANFDFSSFYCAHQID
WAAEMKDSGNATGCVTFHPTKPRPI
Coding >Ophio5|607
ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA
AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC
TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT
GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT
TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC
AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG
CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGGC
CAGACCGGACGTCGGCTGGCGTACAAGAACAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGC
AAATTCCAGCTTTGCCGAGACGAGAAATGCACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGA
GACGTGCACGGCTCTCCCCCGGACGCTGCCGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTG
GGCAAGACGGCTAATTATGCCAACGCTGGCAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGC
GGATTGCAGAAAGGACTCGGACCGGCCTGTCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAG
GCCTGCGTCGAGTACGAGTTGCTAGAGGTTCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAAC
AGCAAGAATCAGTGCTGCGGTAGTAAGGTCGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCC
CAGCCCTCGGCCTCGTCACCGCCCTCGGCTTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAG
CCGGCCAGTGACCAGGTCTGCCCGGGTCTGGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGT
TGCGGTTGGTACTATGCGGCCAAGGATAAGCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCG
AAATGCGTCGCCGACAGCAAGTGTCAAGGCGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGAC
TGGGCGGCCGAGATGAAGGACAGCGGAAATGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATC
Transcript >Ophio5|607
ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA
AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC
TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT
GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT
TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC
AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG
CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGGC
CAGACCGGACGTCGGCTGGCGTACAAGAACAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGC
AAATTCCAGCTTTGCCGAGACGAGAAATGCACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGA
GACGTGCACGGCTCTCCCCCGGACGCTGCCGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTG
GGCAAGACGGCTAATTATGCCAACGCTGGCAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGC
GGATTGCAGAAAGGACTCGGACCGGCCTGTCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAG
GCCTGCGTCGAGTACGAGTTGCTAGAGGTTCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAAC
AGCAAGAATCAGTGCTGCGGTAGTAAGGTCGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCC
CAGCCCTCGGCCTCGTCACCGCCCTCGGCTTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAG
CCGGCCAGTGACCAGGTCTGCCCGGGTCTGGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGT
TGCGGTTGGTACTATGCGGCCAAGGATAAGCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCG
AAATGCGTCGCCGACAGCAAGTGTCAAGGCGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGAC
TGGGCGGCCGAGATGAAGGACAGCGGAAATGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATC
TAA
Gene >Ophio5|607
ATGGCGGCCATCAAAAGTATCTCGTGGAGCCTTGCGGCCGTTCTCTTGAACTCGCCCTTCATTGTCAACGCTGAA
AAGGTCAACGTGAGACCTCTCGGCAAAGACGTCACCATCAAGGGTAACTCCGTTTCGTGGGTTGGCCCAGACGGC
TTCGAAGATAGCTTCCAGTGTCGTGACCCGCGCATCCTCTGCCTCACGGCTGACAAGAAGATGGCTGCGTGCTGT
GAGGATAAAAATTTACTGAAGGGTTCTCTGGACACAGGCTTCTACTGCTGTGCTGAAGGGCATGACCTGGCGGGT
TCCAAGGAGGTCGGCTTTAGCTGCTGCCCGACTGGCCAGCAATTCGACGGCAAGGTCTGCAAGCTCGTTTGCTCC
AACGGCAAGCTCCTGGTGGACGGCAAGTGTGCCTGTCCTAATGACCAGGAGGAGGCCGCCGACGGCAGCTGCAAG
CCGGCATCGAAGTGCACATCCGGCTTAAGGACTGGTGATTTACTGAAGCCCCCCTTTTCCTCATCATCCACGGTC
AGTCTGACGGAAGACGTGTGTAGGAAAATGCTACATGTTCCAGGGCCAGACCGGACGTCGGCTGGCGTACAAGAA
CAAACAATACTCGGAGACGATGCCTCACAAGGACGCGATTCCCGGCAAATTCCAGCTTTGCCGAGACGAGAAATG
CACGCCCAACCTGCCCGTCAACCCCGATCATGGAATCCGCATTCGAGACGTGCACGGCTCTCCCCCGGACGCTGC
CGACGCAAACCAATGGCTCAACAACGCCAGCGGAGGCAACCACCTGGGCAAGACGGCTAATTATGCCAACGCTGG
CAACTTTACCATCACCAAGTGGCCATGCGGGAAATACTGTCTCAGCGGATTGCAGAAAGGACTCGGACCGGCCTG
TCCGAATGAGGATCCTTCCATCACCTTCTACCGCACTCTTAGCGAGGCCTGCGTCGAGTACGAGTTGCTAGAGGT
TCCCTGCAAGATCCGCGACAAGGCAAACAACTGCATCTGGAAGAACAGCAAGAATCAGTGCTGCGGTAGTAAGGT
CGACTGCACCGAGGCAAACGACGATGCCACTCCTGAGCCCTCACCCCAGCCCTCGGCCTCGTCACCGCCCTCGGC
TTCGTCTCCAAGTTCAACACAAAATGCGCCTCCTTCGGTGACGAAGCCGGCCAGTGACCAGGTCTGCCCGGGTCT
GGACGGCTCGACTCTCGAAGCAGGCGGTATCGGCTTCCGCGTTCGTTGCGGTTGGTACTATGCGGCCAAGGATAA
GCTCGAAGAGAAGAAGAACGTCAAAGACCCCCTTTCTTGCCACGCGAAATGCGTCGCCGACAGCAAGTGTCAAGG
CGCCAACTTTGACTTTTCCAGCTTCTACTGTGCGCACCAGATCGACTGGGCGGCCGAGATGAAGGACAGCGGAAA
TGCCACTGGTTGTGTGACTTTCCACCCGACGAAGCCGCGGCCCATCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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