Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6067
Gene name
Locationscaffold_513:14253..14832
Strand-
Gene length (bp)579
Transcript length (bp)579
Coding sequence length (bp)576
Protein length (aa) 192

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08690 GET2 GET complex subunit GET2 1.2E-18 11 185

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.45

Transmembrane Domains

Domain # Start End Length
1 71 93 22
2 114 133 19
3 168 190 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6067
MLGLDRDATASPGAGPSDDDPLMKMMSQMMSGFGGGSSSPFAGMPFPQPPPQQQVPRSDGYTLFFRLLHALLGLG
LGLYLTSVLLAPPLFTGTRAQREQQSFAASTADEERRKLVFFWVFATGEAVLLSSRFFLDKARQPPPGLLWTAVG
FLPEPLKGYVSIVLRYGQFFMTVRADVLACVFVLGAACWYRT
Coding >Ophio5|6067
ATGCTCGGACTCGACCGCGACGCCACCGCCAGCCCCGGTGCCGGACCCTCGGATGACGATCCGCTCATGAAGATG
ATGTCGCAGATGATGAGCGGCTTCGGTGGCGGATCGTCCTCTCCCTTTGCCGGCATGCCCTTCCCGCAACCGCCG
CCGCAACAACAAGTTCCCAGATCAGACGGCTACACCTTATTCTTCCGCCTGTTACACGCCCTTCTCGGCCTCGGT
CTCGGTCTCTACCTCACTTCGGTTCTACTCGCGCCGCCCTTATTTACGGGCACTCGGGCGCAGCGAGAGCAGCAG
AGCTTCGCGGCGTCCACCGCCGACGAGGAGCGCCGCAAGCTCGTCTTCTTCTGGGTTTTTGCCACCGGCGAGGCT
GTGCTCCTCTCGTCGCGCTTCTTCCTCGACAAGGCCCGCCAGCCGCCGCCGGGACTGCTGTGGACTGCCGTCGGC
TTTCTCCCCGAGCCTCTTAAGGGCTACGTTTCCATCGTCCTCCGCTACGGCCAGTTCTTCATGACGGTTCGTGCC
GATGTTTTAGCCTGTGTCTTTGTCCTTGGTGCCGCATGTTGGTACAGGACT
Transcript >Ophio5|6067
ATGCTCGGACTCGACCGCGACGCCACCGCCAGCCCCGGTGCCGGACCCTCGGATGACGATCCGCTCATGAAGATG
ATGTCGCAGATGATGAGCGGCTTCGGTGGCGGATCGTCCTCTCCCTTTGCCGGCATGCCCTTCCCGCAACCGCCG
CCGCAACAACAAGTTCCCAGATCAGACGGCTACACCTTATTCTTCCGCCTGTTACACGCCCTTCTCGGCCTCGGT
CTCGGTCTCTACCTCACTTCGGTTCTACTCGCGCCGCCCTTATTTACGGGCACTCGGGCGCAGCGAGAGCAGCAG
AGCTTCGCGGCGTCCACCGCCGACGAGGAGCGCCGCAAGCTCGTCTTCTTCTGGGTTTTTGCCACCGGCGAGGCT
GTGCTCCTCTCGTCGCGCTTCTTCCTCGACAAGGCCCGCCAGCCGCCGCCGGGACTGCTGTGGACTGCCGTCGGC
TTTCTCCCCGAGCCTCTTAAGGGCTACGTTTCCATCGTCCTCCGCTACGGCCAGTTCTTCATGACGGTTCGTGCC
GATGTTTTAGCCTGTGTCTTTGTCCTTGGTGCCGCATGTTGGTACAGGACTTGA
Gene >Ophio5|6067
ATGCTCGGACTCGACCGCGACGCCACCGCCAGCCCCGGTGCCGGACCCTCGGATGACGATCCGCTCATGAAGATG
ATGTCGCAGATGATGAGCGGCTTCGGTGGCGGATCGTCCTCTCCCTTTGCCGGCATGCCCTTCCCGCAACCGCCG
CCGCAACAACAAGTTCCCAGATCAGACGGCTACACCTTATTCTTCCGCCTGTTACACGCCCTTCTCGGCCTCGGT
CTCGGTCTCTACCTCACTTCGGTTCTACTCGCGCCGCCCTTATTTACGGGCACTCGGGCGCAGCGAGAGCAGCAG
AGCTTCGCGGCGTCCACCGCCGACGAGGAGCGCCGCAAGCTCGTCTTCTTCTGGGTTTTTGCCACCGGCGAGGCT
GTGCTCCTCTCGTCGCGCTTCTTCCTCGACAAGGCCCGCCAGCCGCCGCCGGGACTGCTGTGGACTGCCGTCGGC
TTTCTCCCCGAGCCTCTTAAGGGCTACGTTTCCATCGTCCTCCGCTACGGCCAGTTCTTCATGACGGTTCGTGCC
GATGTTTTAGCCTGTGTCTTTGTCCTTGGTGCCGCATGTTGGTACAGGACTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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