© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|6051 |
| Gene name | |
| Location | scaffold_511:1186..2315 |
| Strand | - |
| Gene length (bp) | 1129 |
| Transcript length (bp) | 843 |
| Coding sequence length (bp) | 840 |
| Protein length (aa) | 280 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF19117 | Mim2 | Mitochondrial import 2 | 1.5E-23 | 25 | 68 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|G2TRP0|TAM7_SCHPO | Uncharacterized protein tam7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tam7 PE=2 SV=1 | 33 | 67 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0045040 | protein insertion into mitochondrial outer membrane | Yes |
| GO:0070096 | mitochondrial outer membrane translocase complex assembly | Yes |
| GO:0051179 | localization | No |
| GO:0007008 | outer mitochondrial membrane organization | No |
| GO:0051649 | establishment of localization in cell | No |
| GO:0051641 | cellular localization | No |
| GO:0051668 | localization within membrane | No |
| GO:0072655 | establishment of protein localization to mitochondrion | No |
| GO:0033036 | macromolecule localization | No |
| GO:0009987 | cellular process | No |
| GO:0070585 | protein localization to mitochondrion | No |
| GO:0061024 | membrane organization | No |
| GO:0006810 | transport | No |
| GO:0006886 | intracellular protein transport | No |
| GO:0007005 | mitochondrion organization | No |
| GO:0051234 | establishment of localization | No |
| GO:0033365 | protein localization to organelle | No |
| GO:0071705 | nitrogen compound transport | No |
| GO:0070727 | cellular macromolecule localization | No |
| GO:0008150 | biological_process | No |
| GO:0043933 | protein-containing complex organization | No |
| GO:0090150 | establishment of protein localization to membrane | No |
| GO:0015031 | protein transport | No |
| GO:0006996 | organelle organization | No |
| GO:0071840 | cellular component organization or biogenesis | No |
| GO:0071702 | organic substance transport | No |
| GO:0090151 | establishment of protein localization to mitochondrial membrane | No |
| GO:0007006 | mitochondrial membrane organization | No |
| GO:0065003 | protein-containing complex assembly | No |
| GO:0072657 | protein localization to membrane | No |
| GO:0045184 | establishment of protein localization | No |
| GO:0051205 | protein insertion into membrane | No |
| GO:0022607 | cellular component assembly | No |
| GO:0046907 | intracellular transport | No |
| GO:0051204 | protein insertion into mitochondrial membrane | No |
| GO:0006839 | mitochondrial transport | No |
| GO:0016043 | cellular component organization | No |
| GO:0072594 | establishment of protein localization to organelle | No |
| GO:0008104 | protein localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 67 | 0.5 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|6051 MADSDDVDSLPSLSTTEIYSDSEPDAQAEWERSLEQLQLVLTMILVPWLGKYFGRKFAYWGWARYMEWMHNVEIR WTNKRLFKGRQLCIHESSSLIRRRLLRHYVEEIRKEEDAERARDKEKAIRRLCHLRHVGPRVIPTTEAEAPRGPD AEYEPKRQADPEEPHEGGAGLNLAAALDVVLCAPADPSTVVGSDVDGAAVGGAELTGEDDGADKGEEDGQGVEGY HEDRADHGWDEGGEEAHVTDDGRDKQDPDEGADAREELADVDHGDGVGAAFFLLL |
| Coding | >Ophio5|6051 ATGGCCGACTCGGATGACGTCGACTCGCTGCCGTCGCTGTCCACGACCGAAATCTACTCCGATTCGGAGCCGGAC GCGCAGGCCGAGTGGGAGCGCAGTCTAGAGCAGCTACAGCTTGTTCTGACCATGATACTGGTGCCGTGGCTGGGG AAATACTTTGGCCGCAAATTTGCCTACTGGGGTTGGGCGCGGTACATGGAGTGGATGCACAACGTCGAGATCCGC TGGACCAACAAGCGCCTCTTCAAAGGGCGTCAACTCTGCATACATGAATCTTCATCCCTGATTCGACGACGGCTG CTGCGGCATTATGTAGAAGAGATAAGAAAAGAAGAAGATGCGGAGAGGGCAAGAGACAAGGAAAAGGCGATTCGC AGGCTATGCCACCTGAGACATGTTGGGCCGCGGGTAATACCGACGACGGAAGCTGAGGCTCCCCGCGGACCTGAT GCTGAATATGAGCCCAAACGACAGGCTGACCCAGAGGAACCACATGAAGGAGGTGCTGGCCTGAATCTCGCGGCA GCGCTTGACGTCGTTCTTTGCGCCCCAGCCGATCCATCGACGGTGGTGGGGAGTGACGTGGACGGCGCCGCAGTT GGGGGCGCCGAGCTCACCGGCGAGGACGACGGCGCTGACAAAGGTGAAGAAGACGGCCAGGGCGTCGAGGGGTAT CATGAAGACCGGGCAGACCATGGCTGGGATGAAGGAGGCGAAGAAGCCCACGTTACCGATGACGGCCGTGACAAG CAGGACCCAGATGAGGGCGCTGATGCGCGAGAGGAGCTGGCCGACGTCGACCATGGTGACGGTGTTGGGGCTGCT TTCTTTCTTCTTCTT |
| Transcript | >Ophio5|6051 ATGGCCGACTCGGATGACGTCGACTCGCTGCCGTCGCTGTCCACGACCGAAATCTACTCCGATTCGGAGCCGGAC GCGCAGGCCGAGTGGGAGCGCAGTCTAGAGCAGCTACAGCTTGTTCTGACCATGATACTGGTGCCGTGGCTGGGG AAATACTTTGGCCGCAAATTTGCCTACTGGGGTTGGGCGCGGTACATGGAGTGGATGCACAACGTCGAGATCCGC TGGACCAACAAGCGCCTCTTCAAAGGGCGTCAACTCTGCATACATGAATCTTCATCCCTGATTCGACGACGGCTG CTGCGGCATTATGTAGAAGAGATAAGAAAAGAAGAAGATGCGGAGAGGGCAAGAGACAAGGAAAAGGCGATTCGC AGGCTATGCCACCTGAGACATGTTGGGCCGCGGGTAATACCGACGACGGAAGCTGAGGCTCCCCGCGGACCTGAT GCTGAATATGAGCCCAAACGACAGGCTGACCCAGAGGAACCACATGAAGGAGGTGCTGGCCTGAATCTCGCGGCA GCGCTTGACGTCGTTCTTTGCGCCCCAGCCGATCCATCGACGGTGGTGGGGAGTGACGTGGACGGCGCCGCAGTT GGGGGCGCCGAGCTCACCGGCGAGGACGACGGCGCTGACAAAGGTGAAGAAGACGGCCAGGGCGTCGAGGGGTAT CATGAAGACCGGGCAGACCATGGCTGGGATGAAGGAGGCGAAGAAGCCCACGTTACCGATGACGGCCGTGACAAG CAGGACCCAGATGAGGGCGCTGATGCGCGAGAGGAGCTGGCCGACGTCGACCATGGTGACGGTGTTGGGGCTGCT TTCTTTCTTCTTCTTTGA |
| Gene | >Ophio5|6051 ATGGCCGACTCGGATGACGTCGACTCGCTGCCGTCGCTGTCCACGACCGAAATCTACTCCGATTCGGAGCCGGAC GCGCAGGCCGAGTGGGAGCGCAGTCTAGAGCAGCTACAGCTTGTTCTGACCATGATACTGGTGCCGTGGCTGGGG AAATACTTTGGCCGCAAATTTGCCTACTGGGGTGAGTTGGCGACGTCGCCAAAAAAAGTCAAGACTCCTTTCGCG CTGACCACACACACACACACACACACACACACACAGGTTGGGCGCGGTACATGGAGTGGATGCACAACGTCGAGA TCCGCTGGACCAACAAGCGCCTCTTCAAAGTCGCAGGCGCCGTCGAGGCTGCGACCACGCTGTGATGAAAAGATC TAGATTACTATTTATATAAGGGGCGTCAACTCTGCATACATGAATCTTCATCCCTGATTCGACGACGGCTGCTGC GGCATTATGTAGAAGAGATGTGCGTGTATGATGCAGGGAATCATGTGCCCCGGACGGGGGAATAACAGACGACAG AAGAAAAGAAGAAGATGCGGAGAGGGCAAGAGACAAGGAAAAGGCGATTCGCAGGCTATGCCACCTGAGACATGT TGGGCCGCGGGTAATACCGACGACGGAAGCTGAGGCTCCCCGCGGACCTGATGCTGAATATGAGCCCAAACGACA GGCTGACCCAGAGGAACCACATGAAGGAGGTGCTGGCCTGAATCTCGCGGCAGCGCTTGACGTCGTTCTTTGCGC CCCAGCCGATCCATCGACGGTGGTGGGGAGTGACGTGGACGGCGCCGCAGTTGGGGGCGCCGAGCTCACCGGCGA GGACGACGGCGCTGACAAAGGTGAAGAAGACGGCCAGGGCGTCGAGGGGTATCATGAAGACCGGGCAGACCATGG CTGGGATGAAGGAGGCGAAGAAGCCGTATAAGGCTGGAAACCAGGCCAAGGCGGCACAGAACATGGTGAAGTTGA GGGGCGCCATGTAGCCATTGATGTTGTTGTGCAGCACGTTACCGATGACGGCCGTGACAAGCAGGACCCAGATGA GGGCGCTGATGCGCGAGAGGAGCTGGCCGACGTCGACCATGGTGACGGTGTTGGGGCTGCTTTCTTTCTTCTTCT TTGA |