Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|6018
Gene name
Locationscaffold_509:4012..4814
Strand-
Gene length (bp)802
Transcript length (bp)384
Coding sequence length (bp)381
Protein length (aa) 127

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.5

Transmembrane Domains

Domain # Start End Length
1 50 72 22
2 96 118 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|6018
MPARQRPLALHAALRLPVLFPPLAAHHVVAAVRPPSCPVDPCCGALLVPLLVGFPFAHHYLFLTLFLPGVVLLAR
SLPSPGLLSSSASPPSTSPLLTSSRSLALCLLLATFYSVSFVISSRLPRPSG
Coding >Ophio5|6018
ATGCCGGCACGGCAACGACCGCTCGCATTGCATGCAGCTCTCCGTCTTCCCGTGCTCTTCCCGCCACTGGCAGCA
CATCACGTTGTCGCCGCTGTGCGGCCCCCGAGCTGCCCCGTGGATCCATGCTGCGGCGCGCTGCTGGTGCCTCTA
CTGGTGGGCTTCCCGTTTGCGCATCACTACCTATTTTTGACCCTTTTCCTCCCTGGCGTCGTGCTGCTCGCCCGC
TCTCTCCCATCTCCTGGTCTTCTCTCCTCGTCTGCGTCGCCGCCTTCCACCTCGCCTCTTCTCACCTCTAGTCGC
TCGCTCGCTCTCTGCCTCCTGCTCGCTACATTCTATTCCGTTTCTTTTGTCATATCGAGCCGTTTGCCCCGTCCA
AGTGGT
Transcript >Ophio5|6018
ATGCCGGCACGGCAACGACCGCTCGCATTGCATGCAGCTCTCCGTCTTCCCGTGCTCTTCCCGCCACTGGCAGCA
CATCACGTTGTCGCCGCTGTGCGGCCCCCGAGCTGCCCCGTGGATCCATGCTGCGGCGCGCTGCTGGTGCCTCTA
CTGGTGGGCTTCCCGTTTGCGCATCACTACCTATTTTTGACCCTTTTCCTCCCTGGCGTCGTGCTGCTCGCCCGC
TCTCTCCCATCTCCTGGTCTTCTCTCCTCGTCTGCGTCGCCGCCTTCCACCTCGCCTCTTCTCACCTCTAGTCGC
TCGCTCGCTCTCTGCCTCCTGCTCGCTACATTCTATTCCGTTTCTTTTGTCATATCGAGCCGTTTGCCCCGTCCA
AGTGGTTGA
Gene >Ophio5|6018
ATGCCGGCACGGCAACGACCGCTCGCATTGCATGCAGCTCTCCGTCTTCCCGTGCTCTTCCCGCCACTGGCAGCA
CATCACGTTGTCGCCGCTGTGCGGCCCCCGAGCTGCCCCGTGGATCCATGCTGCGGCGCGCTGCTGGTGCCTCTA
CTGGTGGGCTTCCCGTTTGCGCATCACTACCTATTTTTGACCCTTTTCCTCCCTGGCGTCGTGCTGGTGTGTGAG
ATGACTGAGCTCCCGCTGGCCCCCTCCCCCCGGTCCCTAGCAACGGCATCGTTGGAGCTCGGAATTGATGTTCTG
TCTCTCCCTTGGTGGTGGCCACCGTCTTCCTTTTGCGTCCCGCCCGCTCATTTCGTGCCGGTCAGGGGTGCTTGC
TATCTGCCCACCTACCCAGTACCTGCCTGCCTATCTATCGCTATCTATACCTCGTAGCTCGCCCGCTCTCTCCCA
TCTCCTGGTCTTCTCTCCTCGTCTGCGTCGCCGCCTTCCACCTCGCCTCTTCTCACCTCTAGTCGCTCGCTCGCT
CTCTGCCTCCTGCTCGGTGAGTCCTTCGCTCCCTCGTTACTTGCCCCTGCCCCTGTTGGACCGACTGCCGGGCCG
AATCAGTGGCTTGCCAGGCTGCCACGAATTCCTCCTCTTCTCTCGATGAATCCAGCCCGTCGACTTTTTTTTTTT
GCTTCTCCCAGTTTTGACTGCTGCCGCTCAAGCAACATAGACGCTAACAACACGGCTTATCCGCACAGCTACATT
CTATTCCGTTTCTTTTGTCATATCGAGCCGTTTGCCCCGTCCAAGTGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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